; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005694 (gene) of Chayote v1 genome

Gene IDSed0005694
OrganismSechium edule (Chayote v1)
DescriptionSAP30_Sin3_bdg domain-containing protein
Genome locationLG10:28833422..28836790
RNA-Seq ExpressionSed0005694
SyntenySed0005694
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR024145 - Histone deacetylase complex subunit SAP30/SAP30-like
IPR025718 - Histone deacetylase complex subunit SAP30, Sin3 binding domain
IPR038291 - SAP30, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152712.1 uncharacterized protein LOC101220556 isoform X1 [Cucumis sativus]7.3e-9387.5Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWN +DMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST+VDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

XP_022144390.1 uncharacterized protein LOC111014080 isoform X1 [Momordica charantia]1.5e-9387.98Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWNGLDMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST+VDL KLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

XP_022144391.1 uncharacterized protein LOC111014080 isoform X2 [Momordica charantia]6.2e-9287.98Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWNGLDMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST VDL KLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

XP_038883974.1 uncharacterized protein LOC120074938 isoform X1 [Benincasa hispida]8.6e-9487.98Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWNG+DMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSALQGST+VDLSKLEMAALWRYWRHFNLV AIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

XP_038883975.1 uncharacterized protein LOC120074938 isoform X2 [Benincasa hispida]3.6e-9287.98Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWNG+DMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSALQGST VDLSKLEMAALWRYWRHFNLV AIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

TrEMBL top hitse value%identityAlignment
A0A0A0LNK2 SAP30_Sin3_bdg domain-containing protein3.5e-9387.5Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWN +DMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST+VDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

A0A1S3BAV7 uncharacterized protein LOC103487947 isoform X13.5e-9387.5Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWN +DMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST+VDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

A0A5A7VFZ9 Histone deacetylase complex subunit SAP30/SAP30-like protein3.5e-9387.5Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWN +DMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST+VDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

A0A6J1CRH4 uncharacterized protein LOC111014080 isoform X17.1e-9487.98Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWNGLDMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST+VDL KLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

A0A6J1CT98 uncharacterized protein LOC111014080 isoform X23.0e-9287.98Show/hide
Query:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE
        M++AV SSI+GGFS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFE
Subjt:  MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE

Query:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ
        NLQWNGLDMASD A KSH+SRHKL KSSGSS K+MSRSLSCDSQSKSSVSA QGST VDL KLEMAALWRYWRHFNLVDAIPNPSKEQLVDLV+RHFMSQ
Subjt:  NLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQ

Query:  VLKFLPIL
         L  L ++
Subjt:  VLKFLPIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19330.1 unknown protein9.5e-7571.89Show/hide
Query:  MMQAVASS--IHGGFSQFPSF-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDE
        M++AV SS  ++GGF Q  SF GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDD+
Subjt:  MMQAVASS--IHGGFSQFPSF-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDE

Query:  LEFENLQWNGLDM-----ASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVD
        L+FEN Q NG DM     AS+  LK H+S+ + ++SS SS K+MSRSLS DSQSKSS      + +VDLSKLEM AL  YWRHFNLVDAIPNPSKEQL+D
Subjt:  LEFENLQWNGLDM-----ASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVD

Query:  LVRRHFMSQVLKFLPIL
        +V+RHFMSQ +  L ++
Subjt:  LVRRHFMSQVLKFLPIL

AT1G19330.2 unknown protein3.9e-7673.11Show/hide
Query:  MMQAVASS--IHGGFSQFPSF-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDE
        M++AV SS  ++GGF Q  SF GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDD+
Subjt:  MMQAVASS--IHGGFSQFPSF-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDE

Query:  LEFENLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRH
        L+FEN Q NG DM S+  LK H+S+ + ++SS SS K+MSRSLS DSQSKSS      + +VDLSKLEM AL  YWRHFNLVDAIPNPSKEQL+D+V+RH
Subjt:  LEFENLQWNGLDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRH

Query:  FMSQVLKFLPIL
        FMSQ +  L ++
Subjt:  FMSQVLKFLPIL

AT1G19330.3 unknown protein3.6e-7471.56Show/hide
Query:  MMQAVASS--IHGGFSQFPSF-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDE
        M++AV SS  ++GGF Q  SF GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDD+
Subjt:  MMQAVASS--IHGGFSQFPSF-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDE

Query:  LEFENLQWNGLDM-----ASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSS-VSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLV
        L+FEN Q NG DM     AS+  LK H+S+ + ++SS SS K+MSRSLS DSQSKSS  +  +   +VDLSKLEM AL  YWRHFNLVDAIPNPSKEQL+
Subjt:  LEFENLQWNGLDM-----ASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSS-VSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLV

Query:  DLVRRHFMSQVLKFLPIL
        D+V+RHFMSQ +  L ++
Subjt:  DLVRRHFMSQVLKFLPIL

AT1G75060.1 unknown protein6.6e-6868.32Show/hide
Query:  GGFSQFPS-FGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE-NLQWN-G
        GGFSQ  S FGD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED++LE + + QWN  
Subjt:  GGFSQFPS-FGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE-NLQWN-G

Query:  LDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQVLKFLP
         DM ++  LK H+S+ +  +SS  S K++ R +SCDS SK S    + + +VDL+KL+MAAL RYWRHFNLVDA+PNP+KEQL+D+++RHFMSQ +  L 
Subjt:  LDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQVLKFLP

Query:  IL
        ++
Subjt:  IL

AT1G75060.2 unknown protein5.6e-6768.81Show/hide
Query:  GGFSQFPS-FGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE-NLQWN-G
        GGFSQ  S FGD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED++LE + + QWN  
Subjt:  GGFSQFPS-FGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFE-NLQWN-G

Query:  LDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQVLKFLP
         DM ++  LK H+S+ +  +SS  S K++ R +SCDS SK S S       VDL+KL+MAAL RYWRHFNLVDA+PNP+KEQL+D+++RHFMSQ +  L 
Subjt:  LDMASDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQVLKFLP

Query:  IL
        ++
Subjt:  IL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCAAGCTGTGGCGAGTTCCATCCATGGCGGTTTCTCGCAGTTTCCGAGCTTTGGGGACAGCAGCGAGGAGGAGCTTTCGGTTCTTCCTCGTCATACTAAGGTTGT
CGTCACCGGAAATAATCGAACCAAATCTGTCCTCGTTGGCCTTCAAGGCGTCGTCAAGAAGGCCGTTGGCCTTGGCGGCTGGCATTGGCTGGTTCTAACTAATGGCATAG
AGGTGAAACTACAGCGGAATGCACTTAGTGTGATCGAGGCTCCAACGGGTAATGAGGAAGACGACGAGCTCGAATTCGAGAACTTGCAATGGAATGGATTGGATATGGCA
TCCGATGGCGCCCTAAAATCTCATAGATCGAGGCATAAATTACGTAAATCATCTGGGTCTTCTCTTAAGTCTATGAGTAGATCCCTTTCCTGTGACTCGCAGTCAAAGAG
CTCAGTTTCTGCACTGCAAGGATCAACGAGGGTTGACCTTAGTAAGTTGGAGATGGCTGCATTGTGGAGATATTGGCGACACTTCAATCTCGTAGATGCGATTCCCAATC
CGTCGAAAGAGCAACTGGTAGATCTAGTTCGAAGGCATTTCATGTCGCAGGTACTCAAGTTTCTCCCTATTCTTGCAACCATGCGTTGCTGCCCTGGAACGATCCCGCTT
ATGCAATTGCTAACTGGATCATTAAGAAAAGAACGAGACAACGGACAAAACTATTTTTCCTTCTGTTTAACGTATAAGAATTGTTATGATTTATCTGACAAACCTATTTT
CCTTCTGTTTAACGTATAA
mRNA sequenceShow/hide mRNA sequence
GCGCAAACACTCCTTTTCTCTGCGTTTCTTTCTCGCCCAGAAATTCCCCAAATTCCCCCCTCAATAATCTCATTCTCAATTGCATGGCCTTTCTTCTACGTATTTTCTTC
CATTTTTGTAGGTGAATTTCCTCTGTTTTCACTGACCCCATTTGAGTTTCAGACCGTTTGAAATGATGCAAGCTGTGGCGAGTTCCATCCATGGCGGTTTCTCGCAGTTT
CCGAGCTTTGGGGACAGCAGCGAGGAGGAGCTTTCGGTTCTTCCTCGTCATACTAAGGTTGTCGTCACCGGAAATAATCGAACCAAATCTGTCCTCGTTGGCCTTCAAGG
CGTCGTCAAGAAGGCCGTTGGCCTTGGCGGCTGGCATTGGCTGGTTCTAACTAATGGCATAGAGGTGAAACTACAGCGGAATGCACTTAGTGTGATCGAGGCTCCAACGG
GTAATGAGGAAGACGACGAGCTCGAATTCGAGAACTTGCAATGGAATGGATTGGATATGGCATCCGATGGCGCCCTAAAATCTCATAGATCGAGGCATAAATTACGTAAA
TCATCTGGGTCTTCTCTTAAGTCTATGAGTAGATCCCTTTCCTGTGACTCGCAGTCAAAGAGCTCAGTTTCTGCACTGCAAGGATCAACGAGGGTTGACCTTAGTAAGTT
GGAGATGGCTGCATTGTGGAGATATTGGCGACACTTCAATCTCGTAGATGCGATTCCCAATCCGTCGAAAGAGCAACTGGTAGATCTAGTTCGAAGGCATTTCATGTCGC
AGGTACTCAAGTTTCTCCCTATTCTTGCAACCATGCGTTGCTGCCCTGGAACGATCCCGCTTATGCAATTGCTAACTGGATCATTAAGAAAAGAACGAGACAACGGACAA
AACTATTTTTCCTTCTGTTTAACGTATAAGAATTGTTATGATTTATCTGACAAACCTATTTTCCTTCTGTTTAACGTATAAGAATTGTTATGATTTATCTGACAAACCCT
TACTCGTTAGCATTTTCGATCCTAATTCGGTTGCAAAGCAACTGGATGAGCTGCAGGTCATCATGGGATTTGCAAAAGCTGCAAAGAGACTGAAGACAGTGTGCAAATGA
GAGGAAGAACTGGGGAATCCATAGAGTGATTCTCATGCTAACAGATAATTTAGCAGAATCAGTAATGTTTCTGTTCTCTTTGTAACATATGTATCGATCGATGACAACCG
GCTTTTGTCTTCTGAGTCGGGATCAGGAGGGAGTTAGTAGGATTTGATCATAGTTAATAGAGTAATATCTTGTTTTAGTGAGGATGTTGCTTGTAGATATGTGTAAGCTG
CAAATATTAGAGACCTGAGAAGATGCCCATAACCACCTGTTTCTAAGCCTTTTTTGATGTAATGCTGACTGACTTTAGGGGTGTTTTCACCCTAAAAATGTGCATATTTT
GATGTTTCCATATTTTGGCTTTTATGAGTTAACCAAGAAAGTTAAGTATATAA
Protein sequenceShow/hide protein sequence
MMQAVASSIHGGFSQFPSFGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENLQWNGLDMA
SDGALKSHRSRHKLRKSSGSSLKSMSRSLSCDSQSKSSVSALQGSTRVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVRRHFMSQVLKFLPILATMRCCPGTIPL
MQLLTGSLRKERDNGQNYFSFCLTYKNCYDLSDKPIFLLFNV