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Sed0005732 (gene) of Chayote v1 genome

Gene IDSed0005732
OrganismSechium edule (Chayote v1)
DescriptionORM1-like protein 3
Genome locationLG07:37503876..37505034
RNA-Seq ExpressionSed0005732
SyntenySed0005732
Gene Ontology termsGO:0090156 - cellular sphingolipid homeostasis (biological process)
GO:1900060 - negative regulation of ceramide biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0035339 - SPOTS complex (cellular component)
InterPro domainsIPR007203 - ORMDL family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048873.1 ORM1-like protein 3 [Cucumis melo var. makuwa]4.2e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
KAE8650225.1 hypothetical protein Csa_011543 [Cucumis sativus]4.2e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
XP_004133804.1 ORM1-like protein 3 [Cucumis sativus]4.2e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
XP_008437865.1 PREDICTED: ORM1-like protein 3 [Cucumis melo]4.2e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
XP_022147418.1 ORM1-like protein 3 [Momordica charantia]5.5e-1885.42Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WT+VNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
TrEMBL top hitse value%identityAlignment
A0A0A0L3T2 Uncharacterized protein2.0e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
A0A1S3AVL5 ORM1-like protein 32.0e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
A0A5A7TZ34 ORM1-like protein 32.0e-1887.5Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
A0A6J1D195 ORM1-like protein 32.6e-1885.42Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WT+VNLSHFAVT HFFHWKKGTPFAED GIYNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
A9P8F2 Uncharacterized protein3.5e-1883.33Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WT+VNLSHFA+T HFFHWKKGTPFAED GIYNRLTWWEQ+DSG  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
SwissProt top hitse value%identityAlignment
O42901 Uncharacterized protein C119.09c9.1e-0847.83Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGS
        + WT+ NL++ A +   FHW  GTPF  + G Y+RLT WEQ+D G+
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGS
P53224 Protein ORM12.7e-0446.34Show/hide
Query:  WTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQID
        WT+ N+++   +   FH  KGTPF  + G Y+ LT WEQID
Subjt:  WTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQID
Q96495 Protein ORM12.1e-0446.34Show/hide
Query:  WTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQID
        WT+ N+++   +   FH  KGTPF  + G Y+ LT WEQID
Subjt:  WTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQID
Arabidopsis top hitse value%identityAlignment
AT1G01230.1 ORMDL family protein3.4e-1872.92Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        M WTVVNL+HF VT H FHW KGTPFA+D GIYN LTWWEQ+D+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
AT5G42000.1 ORMDL family protein2.6e-1868.75Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        + WT+V+L+HF VT H FHWKKGTPF +D G+YNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
AT5G42000.2 ORMDL family protein2.6e-1868.75Show/hide
Query:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL
        + WT+V+L+HF VT H FHWKKGTPF +D G+YNRLTWWEQID+G  L
Subjt:  MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGGACCGTTGTTAATCTTTCTCATTTTGCTGTCACTTGCCACTTCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCTGGGGATCTACAACAGGTTGAC
TTGGTGGGAGCAGATTGATTCTGGAAGCAGCTTACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGGACCGTTGTTAATCTTTCTCATTTTGCTGTCACTTGCCACTTCTTCCATTGGAAGAAAGGGACACCATTTGCTGAAGACCTGGGGATCTACAACAGGTTGAC
TTGGTGGGAGCAGATTGATTCTGGAAGCAGCTTACCCTAA
Protein sequenceShow/hide protein sequence
MGWTVVNLSHFAVTCHFFHWKKGTPFAEDLGIYNRLTWWEQIDSGSSLP