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Sed0005736 (gene) of Chayote v1 genome

Gene IDSed0005736
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:7648951..7649327
RNA-Seq ExpressionSed0005736
SyntenySed0005736
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653222.1 hypothetical protein Csa_019661, partial [Cucumis sativus]8.3e-0853.73Show/hide
Query:  TSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAA-----------AYPPPPLFSDGGS
        ++ PPKRGRIKAQIF+SL NSAA+AAF++++IL RL R LV             A PPPPL   G S
Subjt:  TSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAA-----------AYPPPPLFSDGGS
KAG6583308.1 hypothetical protein SDJN03_19240, partial [Cucurbita argyrosperma subsp. sororia]3.9e-0547.89Show/hide
Query:  TSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAAY------------PPPPLFSDGGSIVT
        +S PP+RGRIKA+IF+SL NSAA+       IL ++ R+LV+ A             PPPPL  DGGS+VT
Subjt:  TSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAAY------------PPPPLFSDGGSIVT
KAG6583309.1 hypothetical protein SDJN03_19241, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0450Show/hide
Query:  TSFPPKRGRIKAQIFQSLANSAAVAAF-LSDQILSRLFRHLVAAAYP----PPPLFSDGGSIVT
        +S PP+RGRIKA+IF+SL NSAA+  F +   ++S    H V    P    PPPL  DGGS+VT
Subjt:  TSFPPKRGRIKAQIFQSLANSAAVAAF-LSDQILSRLFRHLVAAAYP----PPPLFSDGGSIVT
KAG6583472.1 hypothetical protein SDJN03_19404, partial [Cucurbita argyrosperma subsp. sororia]3.0e-0547.89Show/hide
Query:  TSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAAY------------PPPPLFSDGGSIVT
        +S PP+RGRIKA+IF+SL NSAA+       IL ++ R+LV++A             PPPPL  DGGS+VT
Subjt:  TSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAAY------------PPPPLFSDGGSIVT
TrEMBL top hitse value%identityAlignment
A0A0A0LS06 Uncharacterized protein6.4e-0650.77Show/hide
Query:  SFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAA----------YPPPPLFSDGGS
        + PPKRGRIKAQI +SL NSAA+A F++++IL R  R LV +A           PPPPL   G S
Subjt:  SFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAA----------YPPPPLFSDGGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAAGCTTTCCCCCAAAACGGGGTCGTATCAAGGCTCAGATTTTTCAGAGCCTTGCGAATTCCGCCGCCGTCGCCGCCTTCCTCTCCGACCAGATACTCTCCAG
ACTCTTCCGACACCTCGTCGCCGCCGCCTATCCGCCGCCTCCTCTTTTCTCCGATGGAGGCTCCATTGTCACGTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAGGCATATAAATCCACACATAATTTTAACCTTTCCTCTTCCATCTTTCCTTGTGGGTGCTGTTGTTGTTGATTGAGCCATGGCTACAAGCTTTCCCCCAAAACGG
GGTCGTATCAAGGCTCAGATTTTTCAGAGCCTTGCGAATTCCGCCGCCGTCGCCGCCTTCCTCTCCGACCAGATACTCTCCAGACTCTTCCGACACCTCGTCGCCGCCGC
CTATCCGCCGCCTCCTCTTTTCTCCGATGGAGGCTCCATTGTCACGTGATTCAATGGGTTGGAGATTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTGGTTAAAGT
TTGGAATTTTGTGTGTGGAGTGTACTGAATTTCTCAAAGCTTGAGGC
Protein sequenceShow/hide protein sequence
MATSFPPKRGRIKAQIFQSLANSAAVAAFLSDQILSRLFRHLVAAAYPPPPLFSDGGSIVT