; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005741 (gene) of Chayote v1 genome

Gene IDSed0005741
OrganismSechium edule (Chayote v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationLG06:36377259..36379411
RNA-Seq ExpressionSed0005741
SyntenySed0005741
Gene Ontology termsGO:0043170 - macromolecule metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.2e-2654.24Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP ++ WV  DQLL+GWLYNSMT EVA QV     A +LW  +QE +G+Q+ A+ D+LR++ QQ RK +LKM D+L  MK  ADNL  AG PV    LIS
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V++GLDEEY P+   IQ
Subjt:  YVMVGLDEEYTPLAVVIQ

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]3.8e-2550Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP ++ W+ +D+LL+GWLYNSM  +VA QV   S + ELW  +QE +G+Q+ A+ D+L+++ QQ  K +L+M +YL  MK  ADNLALAG  V   DL+S
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V+ GLDEEY P+ V +Q
Subjt:  YVMVGLDEEYTPLAVVIQ

XP_038887140.1 uncharacterized protein LOC120077331 [Benincasa hispida]3.8e-2550Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP+++ W+ +DQLL+GWLYNSMT EV  QV  C  A +LW ++Q+ + LQ+  + D+LR + Q+ RK NLKM DYL  MK  ADNL  AG P+    L+S
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V++GLDEEY  +   IQ
Subjt:  YVMVGLDEEYTPLAVVIQ

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]2.5e-2448.31Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP+++ W+ +DQLL+GWLYNSMT EVA QV  C  A +LW ++ + +G+Q+  + D+LR + Q  RK NLKM +YL  MK   DNL  AG P+    L+S
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V++GLDEEY  +  +IQ
Subjt:  YVMVGLDEEYTPLAVVIQ

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]2.5e-2448.31Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP+++ W+ +DQLL+GWLYNSMT EVA QV  C  A +LW ++ + +G+Q+  + D+LR + Q  RK NLKM +YL  MK   DNL  AG P+    L+S
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V++GLDEEY  +  +IQ
Subjt:  YVMVGLDEEYTPLAVVIQ

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein1.1e-2250.85Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        N  F+ WV  D LL+GWLYNSMT +VA Q+   +   +LWD  Q+F+G+Q+ A+ D LR+MLQ  RK N KM +YL+ MK   DNL   G PV    LIS
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V++GLDE Y  + VVIQ
Subjt:  YVMVGLDEEYTPLAVVIQ

A0A6J1D5J0 uncharacterized protein LOC1110175015.7e-2754.24Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP ++ WV  DQLL+GWLYNSMT EVA QV     A +LW  +QE +G+Q+ A+ D+LR++ QQ RK +LKM D+L  MK  ADNL  AG PV    LIS
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V++GLDEEY P+   IQ
Subjt:  YVMVGLDEEYTPLAVVIQ

A0A6J1DCW4 uncharacterized protein LOC1110195981.8e-2550Show/hide
Query:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS
        NP ++ W+ +D+LL+GWLYNSM  +VA QV   S + ELW  +QE +G+Q+ A+ D+L+++ QQ  K +L+M +YL  MK  ADNLALAG  V   DL+S
Subjt:  NPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPVDNPDLIS

Query:  YVMVGLDEEYTPLAVVIQ
         V+ GLDEEY P+ V +Q
Subjt:  YVMVGLDEEYTPLAVVIQ

A0A803R2Q0 Uncharacterized protein1.6e-2143.51Show/hide
Query:  PSEDEPERLTFRNPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLAL
        P+ D P      NPE++ W+  DQLL+GWLY SMT  +A++V  C  AL LW+ L+E YG  + A  D LR  +Q  RK +  M +YL   + +AD+LAL
Subjt:  PSEDEPERLTFRNPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLAL

Query:  AGYPVDNPDLISYVMVGLDEEYTPLAVVIQN
        AG P     L+S V+ GLD EY  + V+I++
Subjt:  AGYPVDNPDLISYVMVGLDEEYTPLAVVIQN

A0A803R2Q2 Uncharacterized protein1.6e-2143.51Show/hide
Query:  PSEDEPERLTFRNPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLAL
        P+ D P      NPE++ W+  DQLL+GWLY SMT  +A++V  C  AL LW+ L+E YG  + A  D LR  +Q  RK +  M +YL   + +AD+LAL
Subjt:  PSEDEPERLTFRNPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLAL

Query:  AGYPVDNPDLISYVMVGLDEEYTPLAVVIQN
        AG P     L+S V+ GLD EY  + V+I++
Subjt:  AGYPVDNPDLISYVMVGLDEEYTPLAVVIQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTGATACTGCCAAGTGAAGATGAGCCTGAAAGACTCACTTTTCGTAACCCAGAATTTGACATTTGGGTTCAAATAGATCAACTGTTGGTAGGATGGCTATATAA
TTCTATGACAATCGAGGTAGCAGCACAAGTCCCCACATGTAGCTTAGCCCTTGAGTTGTGGGACACTTTGCAAGAATTCTACGGTCTCCAAGCATTTGCTCAAAGGGACC
ATCTTCGGCGAATGTTGCAACAAATAAGAAAGAACAACCTCAAAATGAATGACTACTTGATTTTCATGAAGGGATTTGCTGATAACCTAGCGCTAGCAGGATACCCGGTT
GACAATCCTGATCTCATCTCCTATGTCATGGTTGGACTAGATGAAGAATACACTCCTCTTGCTGTTGTTATTCAAAATGGAAATTTCTCGGGGCCAAAGTGCAGAACATG
CTCCTCACTTATGAGAACAGGTTAG
mRNA sequenceShow/hide mRNA sequence
AATTAATATAAATATGCAATGATTACATTAAAAAAAATTATATATCCTCTCTAAAACACAAATCTCCAAACAACTACATATTTCTAAATACTCAACTTTCTTTAATTCAT
ATTTCTAAATCACTCAACTTCTTTTTCCTCTTCTACCTATTAAGACATAAGTTCTTTGCCTGCTAGTCCTTTGCTTTGTTCGCTGGTTTTTTTCCTTCTTGGTGTATATT
TATTTCTTTGTTGTACCTTTGATTGACAAGCCCTTTGAAGAGATGAGAGCCCTATCTCTTTATTATTTTCTTATCTTCTCTTTAGTTGTATATAGGTGGTTGGTTTTCGG
AGTTAATGGCAGTGAGTTCATTGGGTACATTTTAAACCCATTCAAAGTTCTTTTCTCTTCAAGCTTTCTGAAACTCATTTTGGTATCAGAGCAATCTCAATGGCCAACGT
CGACCATTCATCTTCCTCTTCTCAAACCCCTATAACTCTTCGTGCGACTGAACAAACTGCTCCAACAAAGATGCCTTCCCACGATTCGTGGATCTAGCGTTGTTCATGGT
CAAAGATCAGCTGGACCAGTTTCCATCACCTCAGGTGGTGTCCCGGTATGCAACAACTCTTTTGCCACTCTTCTGTCCAATGTTATCCATGTTAAACTTGACAAGAACAA
TTTCCGGGTTTGGCAAAATATAGCGCTCCCAATCTTGAGGGGCTACAAACTTGATGAACACTTAGATGGGAGTAACCCATGTCCTGACCAGATGATAGTGATACTGCCAA
GTGAAGATGAGCCTGAAAGACTCACTTTTCGTAACCCAGAATTTGACATTTGGGTTCAAATAGATCAACTGTTGGTAGGATGGCTATATAATTCTATGACAATCGAGGTA
GCAGCACAAGTCCCCACATGTAGCTTAGCCCTTGAGTTGTGGGACACTTTGCAAGAATTCTACGGTCTCCAAGCATTTGCTCAAAGGGACCATCTTCGGCGAATGTTGCA
ACAAATAAGAAAGAACAACCTCAAAATGAATGACTACTTGATTTTCATGAAGGGATTTGCTGATAACCTAGCGCTAGCAGGATACCCGGTTGACAATCCTGATCTCATCT
CCTATGTCATGGTTGGACTAGATGAAGAATACACTCCTCTTGCTGTTGTTATTCAAAATGGAAATTTCTCGGGGCCAAAGTGCAGAACATGCTCCTCACTTATGAGAACA
GGTTAGAACATCTTCGTCAAACTGTTAAAGCTAACTTTGTGACAATCAATCAACCATCTGCTCAAGTGGCTTCCACTTATACCCGTCACTCAAATTCCAATCAGAACAAC
TACTCGAATAAAGGTCAGTCTAGCAACTCTCATAGGGGAGGAAGAGGTGGACGAGGCAGGGGTAAGTGGAAACTTTGTTGCAACCATTGTGGAAAAACTAGTCACACCAT
TGAAACTTGCTATTTCAAATCTGAAAGAGGGTACAACAACTCTAGAGGCAATAACCACAACACCAACAATTATTCCAATCATAACAACAACTCATCTGCCATGATAGCCA
CCCCTGAGCATGTGAGAGATAACTCTTGGTACCTGGATAGTGGAGCTAGCAATCACCTAACCTCTTAGCTGGGCAATCTCTCACTGAAATCTGAATACACAGGACAAGGC
CACGGGGAAGGAACTTCTGAGAATGAGCATTAGAGATGGGTCGTATCAACTTCCTGCTTTTGGGACTCTGAACTGTTGCAATGCTACTATGACTAAAGAGTCCAAACAAC
AACATTTTCTTTTTGTTGCAGTGGTATCTGAAGGAGGCAAGGCTGCTTCTGTTTTGTTGGCTTCACCATGAAGTCATTTAGTGTTATCTTGTACTAGGGATGTTTGGCAC
AATAAATTAGGTCACCTCTCTGCTAGAATTCTGTAAAAAATGTTGAAGCTATGTAAGGAAGTGAAGAATGTTAATGA
Protein sequenceShow/hide protein sequence
MIVILPSEDEPERLTFRNPEFDIWVQIDQLLVGWLYNSMTIEVAAQVPTCSLALELWDTLQEFYGLQAFAQRDHLRRMLQQIRKNNLKMNDYLIFMKGFADNLALAGYPV
DNPDLISYVMVGLDEEYTPLAVVIQNGNFSGPKCRTCSSLMRTG