CuGenDBv2

Gene ID	Sed0005742
Organism	Sechium edule (Chayote v1)
Description	ribosomal RNA small subunit methyltransferase H
Genome location	LG13:25508264..25512907
RNA-Seq Expression	Sed0005742
Synteny	Sed0005742
Gene Ontology terms	GO:0070475 - rRNA base methylation (biological process) GO:0009507 - chloroplast (cellular component) GO:0071424 - rRNA (cytosine-N4-)-methyltransferase activity (molecular function)
InterPro domains	IPR002903 - Ribosomal RNA small subunit methyltransferase H IPR023397 - S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7037555.1 rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-196

82.26

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Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE
        MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKKTKN+K             +S KL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
         AVQFGDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF EDSDLKAYT+LKNFKYMKSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDGI MDLGMSSMQVDDPERGFSVLC+GPLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-
        LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N 
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-

Query:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
             EEWIKQ VKGS+G +LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Subjt:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

XP_022940206.1 uncharacterized protein LOC111445901 [Cucurbita moschata]

5.3e-197

82.48

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE
        MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKKTKN+K             +S KL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
         AVQFGDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF EDSDLKAYT+LKNFKYMKSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDGI MDLGMSSMQVDDPERGFSVLC+GPLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-
        LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N 
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-

Query:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
             EEWIKQ VKGSKG +LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Subjt:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

XP_022982487.1 uncharacterized protein LOC111481293 [Cucurbita maxima]

2.0e-196

82.71

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE
        MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD  KK +K KQKKTKN+K             +S KL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
         AVQFGDT+AHIPVMLAEVLDVF   SGRSLRSFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDP+ALDKAQDRISDLF EDSDLK YT+LKNFKYMK L
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PLEPGVDGI MDLGMSSMQVDDPERGFSVL +GPLDMRMDPQASLKAEDILN+WP++EVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIIN-PKTE---ENEVTNIDDEN-
        LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYS FECLAPGGRLAVISFHSLEDRVVKQTFL+IIN PKTE   E EV  ++D+N 
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIIN-PKTE---ENEVTNIDDEN-

Query:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
             EEWIKQTVKGSKG +LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Subjt:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

XP_023524199.1 uncharacterized protein LOC111788179 [Cucurbita pepo subsp. pepo]

2.4e-197

82.71

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE
        MA RSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKKTKN+K             +S KL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
         AVQFGDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF EDSDLKAYT+LKNFKYMKSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PLEPGVDGI MDLGMSSMQVDDPERGFSVLC+GPLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-
        LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N 
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-

Query:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
             EEWIKQTVKGSKG +LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Subjt:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

XP_038896155.1 ribosomal RNA small subunit methyltransferase H [Benincasa hispida]

1.6e-193

81.12

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Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE
        MAFRSSMAK SLFS SP QSLR +H + T +TPP RIFRCCSI+T  D + KA+KEK+K +KNLK              SSKL L KEKRRTRSTK+FDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
        NA+Q GDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDP+ALDKAQDRIS LFSEDSDLKAY +LKNFKY+KSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDGI MDLGMSSMQVDDPERGF VL +GPLDMRMDPQASLKAEDILN+WP+IEVGRI+RVYGEESNWYSLQN+IVKARSQGGLHST+E
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTE----ENEVTNIDDENE
        LVDLIRKST G KGGRQGWIKTATRVFQALRIAVNDEL VLED+LY+CF+CLAPGGRLAVISFHSLEDRVVKQTFL+IINPKT+    E ++T I +ENE
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTE----ENEVTNIDDENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
         WIKQTV GSKGTVLTKRPITPSEEEE LNRRSRSAKLRVIQK N
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDT0 Uncharacterized protein

8.6e-193

80.86

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE
        MAFRSS+AK SLFS S  QSL  +H   T +TPPPRIFR CSIST +  + KA+KEKQKK+KNLK              SSKL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
        NA+  GDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDP+ALDKAQDRISD FSEDSDLKAY +LKNFKY+KSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDG+ MDLGMSSMQVDDPERGF VL +GPLDMRMDPQASLKAEDILNNWP+ EVGRI+RVYGEESNWYSLQN+IVKARSQGGLHST++
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEEN----EVTNIDDENE
        L+DLIRKST G KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+CF+CLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTE +    EVT I +ENE
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEEN----EVTNIDDENE

Query:  EWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKN
        EWIKQTVKG KGTVLTKRPITPSEEEE LNRRSRSAKLRVIQKN
Subjt:  EWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKN

A0A1S3CR02 ribosomal RNA small subunit methyltransferase H

2.9e-193

81.59

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE
        MAFRSS+AK SLFS S  QSL   HL  T +TPPPRIFR CSIST +  + K +KEK KK+KNLK              SSKL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
        NA+  GDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDP+ALDKAQDRISD FSEDSDLKAY +LKNFKY+KSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDGI MDLGMSSMQVDDPERGF VL +GPLDMRMDPQASLKAEDILNNWP+IEVGRI+R YGEESNWYSLQN+IVKARSQGGLHST++
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIK
        L+DLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+CF+CLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTE +EV  I DE EEWIK
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIK

Query:  QTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKN
        QTVKGSKG VLTKRPITPSEEEE LNRRSRSAKLRVIQKN
Subjt:  QTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKN

A0A5A7T697 Ribosomal RNA small subunit methyltransferase H

2.9e-193

81.59

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE
        MAFRSS+AK SLFS S  QSL   HL  T +TPPPRIFR CSIST +  + K +KEK KK+KNLK              SSKL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELN-----------SSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
        NA+  GDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDP+ALDKAQDRISD FSEDSDLKAY +LKNFKY+KSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDGI MDLGMSSMQVDDPERGF VL +GPLDMRMDPQASLKAEDILNNWP+IEVGRI+R YGEESNWYSLQN+IVKARSQGGLHST++
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIK
        L+DLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+CF+CLAPGGRLAVISFHSLEDRVVKQTFL+IINPKTE +EV  I DE EEWIK
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIK

Query:  QTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKN
        QTVKGSKG VLTKRPITPSEEEE LNRRSRSAKLRVIQKN
Subjt:  QTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKN

A0A6J1FNN0 uncharacterized protein LOC111445901

2.6e-197

82.48

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE
        MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKKTKN+K             +S KL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
         AVQFGDT+AHIPVMLAEVLDVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF EDSDLKAYT+LKNFKYMKSL
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PL+PGVDGI MDLGMSSMQVDDPERGFSVLC+GPLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-
        LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAVISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N 
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN-

Query:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
             EEWIKQ VKGSKG +LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Subjt:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

A0A6J1IWR1 uncharacterized protein LOC111481293

9.8e-197

82.71

Show/hide

Query:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE
        MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD  KK +K KQKKTKN+K             +S KL L KEKRRTRSTKEFDE
Subjt:  MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDE

Query:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL
         AVQFGDT+AHIPVMLAEVLDVF   SGRSLRSFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDP+ALDKAQDRISDLF EDSDLK YT+LKNFKYMK L
Subjt:  NAVQFGDTSAHIPVMLAEVLDVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSL

Query:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE
        LADSDE+PLEPGVDGI MDLGMSSMQVDDPERGFSVL +GPLDMRMDPQASLKAEDILN+WP++EVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Subjt:  LADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE

Query:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIIN-PKTE---ENEVTNIDDEN-
        LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYS FECLAPGGRLAVISFHSLEDRVVKQTFL+IIN PKTE   E EV  ++D+N 
Subjt:  LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIIN-PKTE---ENEVTNIDDEN-

Query:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN
             EEWIKQTVKGSKG +LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Subjt:  -----EEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNN

SwissProt top hits

e value

%identity

Alignment

B0TGB2 Ribosomal RNA small subunit methyltransferase H

3.6e-55

41.72

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Query:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV
        HIPV+L +VL+V   R    ++D TVG GGHS+AI+Q        +G+D DP AL  A  +++  F +    +   +  NF+++ +++A   E  L   +
Subjt:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV

Query:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK
        DGI +D+G+SS Q+D+ ERGF+   + PLDMRM+P+++L A  +LN  P+ E+ RI+R YGEE     +   IVK R+   L  T ELVD+IR + P + 
Subjt:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK

Query:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK
          RQ     A R FQALRIAVNDEL  LE++L +  E LAPGGRLAVISFHSLEDR+VK  F           +       N   +K         ++TK
Subjt:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK

Query:  RPITPSEEEEGLNRRSRSAKLRVIQK
        +P+  S+EE   N R++SAKLR  +K
Subjt:  RPITPSEEEEGLNRRSRSAKLRVIQK

C6D563 Ribosomal RNA small subunit methyltransferase H

1.2e-55

39.7

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Query:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLE--P
        HI V+L E +D  + +    +VDCT+G  GHS  I+         +  D D  ALD A+ R++      + +K+     NF+Y++ +L   D   ++  P
Subjt:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLE--P

Query:  GVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPG
         VDGI  DLG+SS Q+D+ ERGFS   + PLDMRMD   +L A DI+N+W + E+ RI+ VYGEE    S+  +IV+AR    + +T EL +L++   P 
Subjt:  GVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPG

Query:  SKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKG--T
        +   R+     A R FQALRIAVNDEL   ED+L    +C+ PGGR++VI+FHSLEDR+ KQ F + +   T   +             + V G  G   
Subjt:  SKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKG--T

Query:  VLTKRPITPSEEEEGLNRRSRSAKLRVIQK
        ++ ++PI P+E+E  +N RSRSAKLRV +K
Subjt:  VLTKRPITPSEEEEGLNRRSRSAKLRVIQK

Q65JY8 Ribosomal RNA small subunit methyltransferase H

1.2e-55

38.96

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Query:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV
        H  V+L E +D  + +   ++VDCT+G  GHS  ++    E    +  D D  AL  A+++++D   +   +K+     NF+Y+K  L +         V
Subjt:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV

Query:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK
        DG+  DLG+SS Q+D PERGFS   + PLDMRMD  A L A++++N WP  ++ +I   YGEE     +  +I KAR Q  + +T +LVD+I+++ P   
Subjt:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK

Query:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK
          R+     A R+FQA+RIAVNDEL+V E++L    E L PGGR++VI+FHSLEDR+ K TF ++ +P    + +  I  E E  +K         ++ +
Subjt:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK

Query:  RPITPSEEEEGLNRRSRSAKLRVIQK
        +PIT SEEE   N R+RSAKLR+ +K
Subjt:  RPITPSEEEEGLNRRSRSAKLRVIQK

Q6MEG4 Ribosomal RNA small subunit methyltransferase H

3.3e-56

40.49

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Query:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV
        H  V+L EV++ F    L+ F+D T+GAGGH+ AI++ HPE++ Y+G+D DP AL+ A  R+ + + +   LK     +   ++K +   S        +
Subjt:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV

Query:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK
        DG+ +DLG+SSMQ+D PERGFS   +GPLDMRM+P+  L A DI+N W + ++G+I R YGEE  W      IV+AR    + +T++L +L++   P   
Subjt:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK

Query:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK
           +  I   T +FQALRI VN EL VLE  +   F+ L PGGR+AVISFHSLEDR+VK       + K    E T +        K   K     ++ +
Subjt:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK

Query:  RPITPSEEEEGLNRRSRSAKLRVIQK
        +PI P E+E   N RSRSAK R+ +K
Subjt:  RPITPSEEEEGLNRRSRSAKLRVIQK

Q8GE08 Ribosomal RNA small subunit methyltransferase H (Fragment)

1.8e-54

41.41

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Query:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV
        HIPV+L EVL+    R    ++D TVG GGHS+AI++        +G+D DP AL  A+ ++ + F++   L    +  NF+ + S++   +E   +  +
Subjt:  HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGV

Query:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK
        DGI +D+G+SS Q+D+ ERGF+     PLDMRM+P  ++ A  ILN +P+ E+ RI+  YGEE     +   IV  R++  L ST++LVD+IR + P + 
Subjt:  DGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSK

Query:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK
          RQ     A R FQALRIAVNDEL  L+++L +  + LAP GRLAVISFHSLEDR+VK  F       T   ++          +    K ++  ++T+
Subjt:  GGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK

Query:  RPITPSEEEEGLNRRSRSAKLRVIQK
        +PIT SEEE  +N RS+SAKLRV QK
Subjt:  RPITPSEEEEGLNRRSRSAKLRVIQK

Arabidopsis top hits

e value

%identity

Alignment

AT5G10910.1 mraW methylase family protein

1.3e-129

61.95

Show/hide

Query:  PPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-ELNSSKLGLAKEKRRTRSTKEFDENAVQFGD--TSAHIPVMLAEVLDVFSGRSLRSFVDCTVGAGGH
        P R     + + ++ + KK  KEK+K+ K ++ E  +++  + KEKRRTRS++ ++   +  GD   S+H+PVML EVLD+FS   LRSFVDCT+GA GH
Subjt:  PPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-ELNSSKLGLAKEKRRTRSTKEFDENAVQFGD--TSAHIPVMLAEVLDVFSGRSLRSFVDCTVGAGGH

Query:  SSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDM
        SS+IIQ+H ELK ++GMDVDPVA       I  L      LKA  +LKNFKY+KS++AD+    L+ GVDGI MDLGMSSMQV++PERGFSVL  GPLDM
Subjt:  SSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDM

Query:  RMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDS
        RMDPQA+L AEDI+N+WP+ E+GR++R YGEESNWY LQNRIVKAR  GGLHST ELVDLIR ++P S+GGRQGWIKTATRVFQ LRIAVNDELK L++S
Subjt:  RMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDS

Query:  LYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTE---------------ENEVTNIDDENEEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRS
        LYS F+ LAPGGRLAVISFHSLEDRVVKQTFL+I+  + E               E  V     E EEWIKQTV  SKG +LTKRPITPSEEEE LNRR+
Subjt:  LYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTE---------------ENEVTNIDDENEEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRS

Query:  RSAKLRVIQK
        RSAKLRVIQK
Subjt:  RSAKLRVIQK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTCAGATCATCAATGGCGAAGCTCTCTTTGTTCTCTCCATCTCCGTTGCAATCTCTCCGTTTACGCCATTTGATCTCCACCAGCTCTACTCCGCCGCCGAGAAT
TTTCCGGTGCTGCTCCATTTCCACGGATACTGATGATCGGAAGAAGGCGAGGAAGGAGAAGCAGAAGAAAACGAAGAATCTCAAGGAATTGAATTCTTCGAAATTAGGTT
TGGCGAAGGAGAAGAGGAGGACTCGTTCCACTAAGGAGTTTGACGAGAACGCTGTTCAGTTTGGAGATACTTCTGCTCATATTCCAGTGATGCTTGCGGAAGTATTGGAC
GTGTTTTCTGGAAGATCGCTGCGCTCATTCGTGGATTGCACCGTCGGTGCCGGTGGACATTCTTCTGCTATTATTCAAGCGCATCCGGAGTTGAAATTTTACATGGGAAT
GGATGTCGATCCAGTTGCACTTGATAAGGCTCAAGATCGGATCAGTGATCTCTTCAGTGAGGATTCTGATTTGAAAGCATATACAATCCTGAAGAACTTCAAATACATGA
AATCTCTACTTGCTGACTCAGATGAGAGACCTTTAGAGCCTGGAGTGGATGGGATTTTTATGGATTTGGGAATGTCATCCATGCAGGTGGACGACCCTGAAAGGGGATTT
AGTGTTCTTTGCAATGGTCCTCTTGATATGCGAATGGATCCTCAGGCAAGTTTAAAAGCAGAGGACATTTTGAACAACTGGCCGGACATAGAAGTGGGGCGTATCATGCG
GGTTTATGGAGAAGAAAGCAACTGGTATTCACTCCAAAACAGAATCGTCAAAGCTCGATCACAGGGTGGATTGCATTCCACCAGCGAATTAGTTGATCTTATCCGGAAAT
CTACGCCTGGTTCTAAAGGAGGAAGACAAGGATGGATAAAGACGGCAACGAGGGTATTCCAAGCTCTAAGGATTGCTGTCAATGACGAACTGAAGGTATTGGAAGACTCC
CTTTACAGTTGTTTTGAGTGTCTCGCTCCCGGAGGTCGACTCGCGGTCATCTCATTCCACAGTTTAGAGGACAGGGTTGTGAAACAAACATTTCTAAACATCATTAATCC
GAAAACGGAAGAAAATGAGGTAACGAATATCGATGACGAAAACGAAGAATGGATTAAGCAAACTGTAAAGGGTTCAAAAGGTACAGTCCTCACGAAAAGGCCAATAACTC
CATCTGAAGAGGAAGAAGGATTAAATCGGCGGTCCAGAAGTGCTAAGCTCAGGGTCATTCAGAAGAACAATGATATTTATAATGTTAGAATGCGAATGGAAAACCACTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVLD
VFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGF
SVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDS
LYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNNDIYNVRMRMENH

Sed0005742 (gene) of Chayote v1 genome