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Sed0005749 (gene) of Chayote v1 genome

Gene IDSed0005749
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:40190645..40191107
RNA-Seq ExpressionSed0005749
SyntenySed0005749
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035234.1 hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa]3.5e-2267.44Show/hide
Query:  MAARCVPPSAPSTIVKP------DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPPAKSP
        M ARCVPPSAPSTIV+P      +A DYETV   L+N K+LVFGG E+K+CLPKGFRRSSAPSRFVNYHTSGGCS +  H    +P
Subjt:  MAARCVPPSAPSTIVKP------DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPPAKSP

KAE8646888.1 hypothetical protein Csa_020968, partial [Cucumis sativus]6.8e-2665.71Show/hide
Query:  MSMSSLLP--FLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-----DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCS
        M M+SL P  F+  LF LL+SSP  +M ARCVPPSAPSTIV+P     +A  YETV   L+N K+LVFGG E+K+CLPKGFRRSSAPSRFVNYHTSGGCS
Subjt:  MSMSSLLP--FLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-----DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCS

Query:  SSNTH
         +  H
Subjt:  SSNTH

KAF3961747.1 hypothetical protein CMV_013666 [Castanea mollissima]1.2e-1460Show/hide
Query:  LIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP---DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGG
        L+    LL+SS +  MAAR +P SAPSTIV+P   +A DY T +KPL   K  VF G E+K+CLPKGFR SSAPSRFVNYH  GG
Subjt:  LIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP---DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGG

KAG2674023.1 hypothetical protein I3760_13G116400 [Carya illinoinensis]4.6e-1454.37Show/hide
Query:  SSLLPFLIYLF---FLLVSSPNLTMAARCVPPSAPSTIVKP---DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYH--TSGGCSSS
        SS+  F + +F    L++SS +  MAAR +P SAPSTIV+P   +A  Y ++ KP  + K  VF G  LKNCLPKGFR SSAPSRFVNYH   S GC+SS
Subjt:  SSLLPFLIYLF---FLLVSSPNLTMAARCVPPSAPSTIVKP---DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYH--TSGGCSSS

Query:  NTH
        N H
Subjt:  NTH

KAG6570806.1 hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2974.26Show/hide
Query:  MSSLLPFLIY-LFFLLVSSPNLTMAARCVPPSAPSTIV----KPDAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNT
        M+SL PFL Y LF LL+SSP+ +MAARCVPPSAPSTIV     P+A DYETV KP LN K+LVFGG E+K+CLPKGFRRSSAPSRFVNYHTSGGCSS+  
Subjt:  MSSLLPFLIY-LFFLLVSSPNLTMAARCVPPSAPSTIV----KPDAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNT

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A0A0KDD3 Uncharacterized protein9.6e-2663.3Show/hide
Query:  MSSLLP--FLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-----DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSS
        M+SL P  F+  LF LL+SSP  +M ARCVPPSAPSTIV+P     +A  YETV   L+N K+LVFGG E+K+CLPKGFRRSSAPSRFVNYHTSGGCS +
Subjt:  MSSLLP--FLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-----DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSS

Query:  NTHPPAKSP
          H    +P
Subjt:  NTHPPAKSP

A0A2K3LET2 Uncharacterized protein3.8e-1457.14Show/hide
Query:  MAARCVPPSAPSTIVKP-DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPP
        MAAR +P SAPST+ +P  ++D ET LKP L+ K+  F G ++KNCLPKG+R +SAPSRFVNY T GGCS  ++  P
Subjt:  MAARCVPPSAPSTIVKP-DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPP

A0A5D3DGK4 Uncharacterized protein1.7e-2267.44Show/hide
Query:  MAARCVPPSAPSTIVKP------DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPPAKSP
        M ARCVPPSAPSTIV+P      +A DYETV   L+N K+LVFGG E+K+CLPKGFRRSSAPSRFVNYHTSGGCS +  H    +P
Subjt:  MAARCVPPSAPSTIVKP------DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPPAKSP

A0A6A4PGI3 Uncharacterized protein4.9e-1453.41Show/hide
Query:  FLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHT--SGGCS
        F++   FL ++S  +TMA R VPPSAPST+ +P  +++ ET +KP L+ K+ +F G E+K CLPKG R +SAPSRFVNY    SGGCS
Subjt:  FLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHT--SGGCS

V7AGA7 Uncharacterized protein4.9e-1449.51Show/hide
Query:  MSMSSLLPFLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHT--SGGCSSSNT
        MS  + +  L  L  L ++S ++ MAAR +P SAPST+ +P   ++ ET LKP L  K+ VF GG++KNCLPKG+R +SAPSRFVNY T  S GCS   +
Subjt:  MSMSSLLPFLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKP-DAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHT--SGGCSSSNT

Query:  HPP
          P
Subjt:  HPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGTCTTCTCTTTTGCCATTCCTTATCTACCTCTTCTTCCTACTTGTGTCCTCTCCCAATCTAACCATGGCTGCTCGGTGTGTCCCACCGAGCGCCCCTAGCAC
CATTGTTAAACCCGATGCTGCAGACTATGAGACTGTACTGAAGCCTCTGCTGAACCCAAAGAAGCTGGTTTTTGGTGGCGGTGAACTCAAAAACTGCCTCCCTAAAGGCT
TCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTCAACTACCATACCTCTGGCGGCTGTTCTTCTTCAAACACTCACCCCCCTGCTAAAAGTCCCTGA
mRNA sequenceShow/hide mRNA sequence
CTCGTTCTCAATCTTTATGTCGATGTCTTCTCTTTTGCCATTCCTTATCTACCTCTTCTTCCTACTTGTGTCCTCTCCCAATCTAACCATGGCTGCTCGGTGTGTCCCAC
CGAGCGCCCCTAGCACCATTGTTAAACCCGATGCTGCAGACTATGAGACTGTACTGAAGCCTCTGCTGAACCCAAAGAAGCTGGTTTTTGGTGGCGGTGAACTCAAAAAC
TGCCTCCCTAAAGGCTTCCGCCGCTCCTCTGCGCCTAGCCGCTTTGTCAACTACCATACCTCTGGCGGCTGTTCTTCTTCAAACACTCACCCCCCTGCTAAAAGTCCCTG
AGAATAACACAGCACATTCACTATGTTGTTCAAGTTTTGTCGTATATACTTTCTTTTTTTTTTTTTTTAATTTATATTTCGCATTTTCTTATATTCAATTTTTTGTTTCT
CCCTTTATAGAATTTGTTCACCG
Protein sequenceShow/hide protein sequence
MSMSSLLPFLIYLFFLLVSSPNLTMAARCVPPSAPSTIVKPDAADYETVLKPLLNPKKLVFGGGELKNCLPKGFRRSSAPSRFVNYHTSGGCSSSNTHPPAKSP