CuGenDBv2

Gene ID	Sed0005811
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG11:1572140..1572753
RNA-Seq Expression	Sed0005811
Synteny	Sed0005811
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_016901708.1 PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo]

3.7e-35

76.15

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD
        MAADGLLRPVYEACIAG DSEIHRRPYHRNC CALHKSRRQP HCSHS   SKSI+YP+RRSWSEGCL+L  A    SPS+SPV GK+S P  A   DDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIAR
        DDAPI  AR
Subjt:  DDAPIQIAR

XP_022938303.1 uncharacterized protein LOC111444438 [Cucurbita moschata]

2.4e-34

72.73

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLV----AASPSSSPVAGKSSLPPPADLSDDD
        MAADG+LRPVYEACIAG DSEIHRRPYHRNCGCALH+SRRQ SHC HS    KS++YP+RRSWSEGCLTL     ++SPSSSPV GKSS P  A   DDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLV----AASPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIARN
        DDAP+Q  R+
Subjt:  DDAPIQIARN

XP_022946869.1 uncharacterized protein LOC111450804 [Cucurbita moschata]

2.4e-34

76.36

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD
        MAADGLLRPVYEACIAG D+EI RRPYHRNCGCALHKSRRQ   CSHS   SKSI YP+RRSWSEGCL L  A    SPSSSPV GK+S P  A LSDDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIARN
        DDAP+Q+ARN
Subjt:  DDAPIQIARN

XP_022965412.1 uncharacterized protein LOC111465326 [Cucurbita maxima]

1.5e-36

78.3

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPADLSDDDDDAP
        MAADG+LRPVYEACIAG DSEIHRRPYHRNCGCALH+SRRQ SHC HS    KS+ YP+RRSWSEGCLTL  ASPSSSPV GKSS  P A LSDDDDDAP
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPADLSDDDDDAP

Query:  IQIARN
        +Q  R+
Subjt:  IQIARN

XP_038889376.1 uncharacterized protein LOC120079294 [Benincasa hispida]

1.3e-37

79.09

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD
        MAADGLLRPVYEACIAG DSEIHRRPYHRNCGCALHKSRRQP HCSHS   SKSI+YP+RRSWSEGCLTLV A    SPSSSPV GK+S P  A   DDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIARN
        DD PI  ARN
Subjt:  DDAPIQIARN

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E0F4 uncharacterized protein LOC103499614

1.8e-35

76.15

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD
        MAADGLLRPVYEACIAG DSEIHRRPYHRNC CALHKSRRQP HCSHS   SKSI+YP+RRSWSEGCL+L  A    SPS+SPV GK+S P  A   DDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIAR
        DDAPI  AR
Subjt:  DDAPIQIAR

A0A6J1FII0 uncharacterized protein LOC111444438

1.1e-34

72.73

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLV----AASPSSSPVAGKSSLPPPADLSDDD
        MAADG+LRPVYEACIAG DSEIHRRPYHRNCGCALH+SRRQ SHC HS    KS++YP+RRSWSEGCLTL     ++SPSSSPV GKSS P  A   DDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLV----AASPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIARN
        DDAP+Q  R+
Subjt:  DDAPIQIARN

A0A6J1G546 uncharacterized protein LOC111450804

1.1e-34

76.36

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD
        MAADGLLRPVYEACIAG D+EI RRPYHRNCGCALHKSRRQ   CSHS   SKSI YP+RRSWSEGCL L  A    SPSSSPV GK+S P  A LSDDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIARN
        DDAP+Q+ARN
Subjt:  DDAPIQIARN

A0A6J1HKA0 uncharacterized protein LOC111465326

7.2e-37

78.3

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPADLSDDDDDAP
        MAADG+LRPVYEACIAG DSEIHRRPYHRNCGCALH+SRRQ SHC HS    KS+ YP+RRSWSEGCLTL  ASPSSSPV GKSS  P A LSDDDDDAP
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPADLSDDDDDAP

Query:  IQIARN
        +Q  R+
Subjt:  IQIARN

A0A6J1KE46 uncharacterized protein LOC111493529

2.0e-34

74.55

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD
        MAADGLLRPVYEACIAG D+EI RRPYHRNCGCALHKSRRQ   CSHS   SKSI YP+RRSWSEGCL L  A    SPSSSPV GK+S P  A   DDD
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAA----SPSSSPVAGKSSLPPPADLSDDD

Query:  DDAPIQIARN
        DDAP+Q+ARN
Subjt:  DDAPIQIARN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G46490.1 unknown protein

4.3e-18

44.25

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Query:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALH---------KSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPAD
        MAADG+ R ++E CI+G DS I RRPYH+NCGCALH         +++R+P  C    S S+SI++P+RRSWSEG +  +    SSS  +   SL   + 
Subjt:  MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALH---------KSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPAD

Query:  LSDDDDDAPIQIA
        LS+   D P+  A
Subjt:  LSDDDDDAPIQIA

AT5G35110.1 unknown protein

8.4e-14

44.44

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Query:  DGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRR---QPSHCSHSSSTSKSIAYPVRRSWSEG-CLTLVAASPSSS----PVAGKSSLPPPADLSD-
        DG+ R ++E CI+  DS I RRPYH+NCGCALH+  R     + C H    S+ + +P++RSWSEG  L L  AS SSS     ++  SS+   A LS  
Subjt:  DGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRR---QPSHCSHSSSTSKSIAYPVRRSWSEG-CLTLVAASPSSS----PVAGKSSLPPPADLSD-

Query:  -DDDDAPI
          D D+PI
Subjt:  -DDDDAPI

Sequences

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CDS sequence

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ATGGCCGCCGACGGGCTCCTCCGCCCCGTCTACGAGGCCTGCATCGCCGGTGCCGACTCCGAGATCCACCGCCGCCCCTACCACCGAAACTGCGGCTGCGCTCTCCACAA
ATCCCGCCGTCAGCCGTCGCACTGCTCACATTCATCCTCCACTTCCAAATCCATCGCCTATCCTGTTCGCCGATCATGGAGCGAAGGCTGCTTGACGCTCGTCGCCGCCT
CTCCTTCCTCCTCCCCTGTCGCCGGTAAGTCCTCTCTGCCTCCTCCCGCCGATTTGAGCGACGACGACGACGACGCTCCTATTCAGATCGCAAGGAATTGA

mRNA sequence

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AAATACCCCAATTTCTCTCTCACGCATTTCTTCAAACACCTTCCATGGCCGCCGACGGGCTCCTCCGCCCCGTCTACGAGGCCTGCATCGCCGGTGCCGACTCCGAGATC
CACCGCCGCCCCTACCACCGAAACTGCGGCTGCGCTCTCCACAAATCCCGCCGTCAGCCGTCGCACTGCTCACATTCATCCTCCACTTCCAAATCCATCGCCTATCCTGT
TCGCCGATCATGGAGCGAAGGCTGCTTGACGCTCGTCGCCGCCTCTCCTTCCTCCTCCCCTGTCGCCGGTAAGTCCTCTCTGCCTCCTCCCGCCGATTTGAGCGACGACG
ACGACGACGCTCCTATTCAGATCGCAAGGAATTGAAATGTAAATTCTGTTATTGTTCTTCTTCTTCTTCTTCCTTGATCTCTCGATTTCTCGATTTTGACGGTTTTTCTG
ACCTAGATGTTGAATGTTTTGGGAACTAGATGAGATGAGATCTATAATTGTGATTATCTTTCTTTTTCTTCGAGTTTTGTGATCTGAAAAACATTATTATTGGATTTTTT
CATGTTTGTGAGTCGCGGATTGCAAAATTTGTATTCTCTGTGTTTGAAGAACAGCTGCTGGTGA

Protein sequence

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MAADGLLRPVYEACIAGADSEIHRRPYHRNCGCALHKSRRQPSHCSHSSSTSKSIAYPVRRSWSEGCLTLVAASPSSSPVAGKSSLPPPADLSDDDDDAPIQIARN

Sed0005811 (gene) of Chayote v1 genome