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Sed0005813 (gene) of Chayote v1 genome

Gene IDSed0005813
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG01:1850518..1850811
RNA-Seq ExpressionSed0005813
SyntenySed0005813
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146170.1 auxin-responsive protein SAUR21-like [Momordica charantia]9.4e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSH EEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.7e-4593.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSH EE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]6.1e-4592.78Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRF+VPI+YLNHPSFQQLLSH EE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]9.4e-4693.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSH EEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022947577.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.7e-4592.78Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL H EEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like4.5e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSH EEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like1.3e-4593.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSH EE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G6U7 auxin-responsive protein SAUR21-like1.3e-4592.78Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL H EEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G772 auxin-responsive protein SAUR21-like4.5e-4693.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSH EEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like1.3e-4593.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSH EE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.5e-2263.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS  E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.6e-2260.71Show/hide
Query:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   ++        PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS  EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR205.2e-2358.89Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS  EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.0e-2257.78Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS  EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.0e-2358.89Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS  EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.6e-2759.18Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        M IR+   +  +KQ+LK   S + N + +PKGH+AVYVGE +Q++RFVVP+TYL+HP FQ+LL   EEEFGF HP GGLTIPC E  FIDL SRL  S
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family2.2e-2452.78Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFI
        MG+ + S +P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPI+YLNHP F++ L+  EEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFI

Query:  DLTSRLQV
         L +  Q+
Subjt:  DLTSRLQV

AT4G34810.1 SAUR-like auxin-responsive protein family1.4e-2656.19Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDL-
        MG+   +     KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPI++LNHPSF++ LS  EEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.4e-2658.76Show/hide
Query:  MGIRLLSFVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSR
        M IR+   +  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP++YL+ PSFQ LL   EEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLLSFVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family2.8e-2458.89Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS  EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATCACTTATCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGTCGAGGAGGAGTTTGGCTTCCATCACC
CACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATCACTTATCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGTCGAGGAGGAGTTTGGCTTCCATCACC
CACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHVEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS