; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0005832 (gene) of Chayote v1 genome

Gene IDSed0005832
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG06:41631860..41633502
RNA-Seq ExpressionSed0005832
SyntenySed0005832
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034267.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa]1.6e-5378.26Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLCGF
        MGLSNFPPSAEG LLLPVLVM+TV SM FLKN VRSVIQMM   GN S  EEE+DWENGRERRIS TQFKTL QSFNG T           ECCVCLC F
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLCGF

Query:  EADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        EADEE+SELSCKHFFHK CLSKWFDNKHFTCPLCRSI+
Subjt:  EADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

KAG6601543.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5478.42Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKNLVRSVIQMM   GNPS  EEE DWENGRERRIS TQFK+L QSFN G             ECCVCLCG
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG

Query:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        FEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI+
Subjt:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

XP_022957080.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]1.9e-5478.42Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKNLVRSVIQMM   GNPS  EEE DWENGRERRIS TQFK+L QSFN G             ECCVCLCG
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG

Query:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        FEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI+
Subjt:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

XP_022984317.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]3.8e-5579.14Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKNLVRSVIQMM   GNPS  EEEFDWENGRERRIS TQFK+L QSFN G             ECCVCLCG
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG

Query:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        FEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI+
Subjt:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

XP_023523084.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]3.8e-5579.14Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKNLVRSVIQMM   GNPS  EEEFDWENGRERRIS TQFK+L QSFN G             ECCVCLCG
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG

Query:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        FEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI+
Subjt:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

TrEMBL top hitse value%identityAlignment
A0A0A0KTI8 RING-type domain-containing protein1.7e-5378.26Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLCGF
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKN VRSVIQMM   GN S  EEE+DWEN RERRIS TQFKTL QSFNG T           ECCVCLC F
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLCGF

Query:  EADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        EADEE+SELSCKHFFHK CLSKWFDNKHFTCPLCRSI+
Subjt:  EADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

A0A5A7SYA9 Putative E3 ubiquitin-protein ligase XERICO7.8e-5478.26Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLCGF
        MGLSNFPPSAEG LLLPVLVM+TV SM FLKN VRSVIQMM   GN S  EEE+DWENGRERRIS TQFKTL QSFNG T           ECCVCLC F
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLCGF

Query:  EADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        EADEE+SELSCKHFFHK CLSKWFDNKHFTCPLCRSI+
Subjt:  EADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

A0A6J1DFU2 probable E3 ubiquitin-protein ligase XERICO4.7e-5176.26Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIG--NPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLC
        MGLSNFPP AEG LLLPVL+MNTV SM FLK+LVRSVIQMM   G  +PS  EEE+D EN RERRIS TQFK+LRQSFNGGT           ECCVCLC
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIG--NPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGT-----------ECCVCLC

Query:  GFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSI
        GFEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI
Subjt:  GFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSI

A0A6J1GZI7 probable E3 ubiquitin-protein ligase XERICO9.2e-5578.42Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKNLVRSVIQMM   GNPS  EEE DWENGRERRIS TQFK+L QSFN G             ECCVCLCG
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG

Query:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        FEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI+
Subjt:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

A0A6J1J1V9 probable E3 ubiquitin-protein ligase XERICO1.8e-5579.14Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG
        MGLSNFPPSAEG LLLPVLVMNTV SM FLKNLVRSVIQMM   GNPS  EEEFDWENGRERRIS TQFK+L QSFN G             ECCVCLCG
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGG------------TECCVCLCG

Query:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID
        FEADEE+SELSCKHFFHK CLSKWFDNKH TCPLCRSI+
Subjt:  FEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRSID

SwissProt top hitse value%identityAlignment
O64763 E3 ubiquitin-protein ligase ATL91.4e-0751.02Show/hide
Query:  GGTECCVCLCGFEADEEISEL-SCKHFFHKGCLSKWFDNKHFTCPLCRS
        GG EC VCLC FE DE +  +  C H FH  C+  W  ++H TCPLCR+
Subjt:  GGTECCVCLCGFEADEEISEL-SCKHFFHKGCLSKWFDNKHFTCPLCRS

Q7ZW78 E3 ubiquitin-protein ligase RNF1813.6e-0834.58Show/hide
Query:  NFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSF----------NGGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKH
        N L  L RS++Q +       D     DW    ++R+     K + QS           + G +C VCL  FE  E + E+ CKH FH GC+  W  NK 
Subjt:  NFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSF----------NGGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKH

Query:  FTCPLCR
         +CPLCR
Subjt:  FTCPLCR

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO1.4e-1535.14Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNP--------------SDYEEEFDWE--------NGRERRISNTQFKTL-RQSFN
        MGLS+ P  +EG  +L V+++NT  S++ +K +VRS + ++G   +P              S   E FD+              R    +F++L R    
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNP--------------SDYEEEFDWE--------NGRERRISNTQFKTL-RQSFN

Query:  GGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS
           EC VCL  F+ D EI++L C H FHK CL KW D  + TCPLCR+
Subjt:  GGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS

Q9XF92 Brassinosteroid-responsive RING protein 17.3e-0931.58Show/hide
Query:  LLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDY-EEEFDWEN--GRERRISNTQ--FKTL-----------RQSFNGGTE----CCVCLCGFEADE
        + LP L + T++ + F++ +V S+ + +G     SD+ E +  W +      RI  T+  F  L            +  N G +    C VCL  FE ++
Subjt:  LLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDY-EEEFDWEN--GRERRISNTQ--FKTL-----------RQSFNGGTE----CCVCLCGFEADE

Query:  EISEL-SCKHFFHKGCLSKWFDNKHFTCPLCRS
        EI  L +C+H FH+ CL +W D+   TCPLCR+
Subjt:  EISEL-SCKHFFHKGCLSKWFDNKHFTCPLCRS

Q9ZU51 E3 ubiquitin-protein ligase RHA2B1.1e-0947.17Show/hide
Query:  RQSFNGGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS
        R S N  ++C VCL   +  EE+ +L C+H FHK CL  W  + +F CPLCRS
Subjt:  RQSFNGGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein8.0e-2754.78Show/hide
Query:  MNTVTSMNFLKNLVRSVIQMMGTIGNPS---DYEEEFDWENGRERRISNTQFKTLRQSF-----NGGTECCVCLCGFEADEEISEL-SCKHFFHKGCLSK
        MNTV S+  LKN+VRSV Q++ +    S   D E E D+     RRIS TQFK+L ++        G ECCVCLCGF+ +EE+SEL SCKHFFH+ CL  
Subjt:  MNTVTSMNFLKNLVRSVIQMMGTIGNPS---DYEEEFDWENGRERRISNTQFKTLRQSF-----NGGTECCVCLCGFEADEEISEL-SCKHFFHKGCLSK

Query:  WFDNKHFTCPLCRSI
        WF N H TCPLCRSI
Subjt:  WFDNKHFTCPLCRSI

AT1G67856.1 RING/U-box superfamily protein3.1e-3150.75Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPS-DYEEEFDWENG-RERRISNTQFKTLRQSFNGGTE-----CCVCLCGFEADE
        MG+S++P ++EG  ++P+LVMNTV S++ +KN+VRSV+ M+ +  N + + E++ D E+  R RRIS T F++L ++     E     CCVCLCGF+ +E
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPS-DYEEEFDWENG-RERRISNTQFKTLRQSFNGGTE-----CCVCLCGFEADE

Query:  EISEL-SCKHFFHKGCLSKWFDNKHFTCPLCRSI
        E+SEL SCKH+FH  CL KWF N H TCPLCRSI
Subjt:  EISEL-SCKHFFHKGCLSKWFDNKHFTCPLCRSI

AT2G01150.1 RING-H2 finger protein 2B8.0e-1147.17Show/hide
Query:  RQSFNGGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS
        R S N  ++C VCL   +  EE+ +L C+H FHK CL  W  + +F CPLCRS
Subjt:  RQSFNGGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS

AT2G04240.1 RING/U-box superfamily protein9.8e-1735.14Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNP--------------SDYEEEFDWE--------NGRERRISNTQFKTL-RQSFN
        MGLS+ P  +EG  +L V+++NT  S++ +K +VRS + ++G   +P              S   E FD+              R    +F++L R    
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNP--------------SDYEEEFDWE--------NGRERRISNTQFKTL-RQSFN

Query:  GGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS
           EC VCL  F+ D EI++L C H FHK CL KW D  + TCPLCR+
Subjt:  GGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS

AT2G04240.2 RING/U-box superfamily protein9.8e-1735.14Show/hide
Query:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNP--------------SDYEEEFDWE--------NGRERRISNTQFKTL-RQSFN
        MGLS+ P  +EG  +L V+++NT  S++ +K +VRS + ++G   +P              S   E FD+              R    +F++L R    
Subjt:  MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNP--------------SDYEEEFDWE--------NGRERRISNTQFKTL-RQSFN

Query:  GGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS
           EC VCL  F+ D EI++L C H FHK CL KW D  + TCPLCR+
Subjt:  GGTECCVCLCGFEADEEISELSCKHFFHKGCLSKWFDNKHFTCPLCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTGTCAAATTTTCCGCCATCAGCCGAAGGGGCGTTGCTGTTGCCAGTTCTAGTGATGAACACAGTGACATCGATGAATTTCTTGAAGAACTTGGTGAGATCTGT
GATTCAAATGATGGGTACGATTGGGAATCCCTCGGATTATGAGGAGGAATTTGATTGGGAAAATGGAAGAGAAAGGAGAATCTCAAATACCCAGTTCAAAACCTTGCGGC
AGAGCTTCAATGGCGGAACAGAGTGCTGTGTTTGTCTTTGTGGGTTTGAAGCTGATGAGGAAATTAGTGAGTTATCTTGTAAGCATTTTTTTCATAAGGGTTGTCTTTCT
AAGTGGTTTGATAATAAGCATTTTACTTGCCCTCTTTGTCGCTCCATTGATTAG
mRNA sequenceShow/hide mRNA sequence
CCAAAACCCTGAACGGATTAGACTGAAAAACAGAAAAAAGAGCTCAAAATCTTGAAGATTTTTGAAGATGGGTCTGTCAAATTTTCCGCCATCAGCCGAAGGGGCGTTGC
TGTTGCCAGTTCTAGTGATGAACACAGTGACATCGATGAATTTCTTGAAGAACTTGGTGAGATCTGTGATTCAAATGATGGGTACGATTGGGAATCCCTCGGATTATGAG
GAGGAATTTGATTGGGAAAATGGAAGAGAAAGGAGAATCTCAAATACCCAGTTCAAAACCTTGCGGCAGAGCTTCAATGGCGGAACAGAGTGCTGTGTTTGTCTTTGTGG
GTTTGAAGCTGATGAGGAAATTAGTGAGTTATCTTGTAAGCATTTTTTTCATAAGGGTTGTCTTTCTAAGTGGTTTGATAATAAGCATTTTACTTGCCCTCTTTGTCGCT
CCATTGATTAGAGTTTTGTGGGAAACTTTTGGTTTTGTTTCTACATTTTTTTTAGTTTTTTAGTTTTGTTTTCTTTTTGTTTTGGGTGACGAGGGTGAAATTTTTGTTGT
ATCTTCACTTTCCCTTTACATATGGTGGTGTATAATGGATTGTTTGGGAGTGAAAGTGCTTTTAGGTGAATCATTCCTAGTTTTTCTTCACTGTTTTATTAAGCACCCTA
AAACAAGGAGAATTGAGTACCATTATGAGGAATGAGAATGAGGGGAAAATAGGTATATGATGAATAGTTTGTGTTTGAGGTTCAGAAGAATCTGTTATCTATATTTGGAA
TCTGTTTGTTTGTTAAGGGGGAAGAGTGATTATGAAAAAATTGTTATCTGTGTTTGGAGCATCTTAAGGCCTTGTTTGGTTTTCCATTTGGAATCCGAGGAACTTGTAAC
CATTGATTCCGGGAGTTTGGAATCTGGGGATATAAAAATCTAAACAAACCAAACAACATTCTTTATTTTGGAGTATCAATACAACAAACCAAACACCGAATTTGATTACG
GTACTGGATTCCGGGGAATTTGGATCCCAACTCGCAAACCAAACCAGGCCTAAATGATTATGTATTTGAGGTGAAGTGAATCTTACGAAAGAAATGTTATCTGTGTTTGG
AGTGTCGAAGAATGAATAGTCATTATGGAGAAATGATACGGGTAAGTTGAATGGTCTAATTTGATCACTCCTCCCCAAACACTCCCTTTACAATTCAAAAACACATCTGT
GGGGCTTTCTCTGTTCTTATCAGTAAATTAGCTCAATGGACTTGGAAGAAGAAGCACAAAACTAGTTTGCAATCAAAGCAAGTAGCTTTAAATGGCAGAGAGCAACTGAG
CCTCAACAGTCGGAACAAGCAGAGCTTTAAATGGCTTAGAGCAGTTGGGCAGTAGTAGCTTAAAAGAAGAAGAAGAATCACAGAATTGAGAACAGTAAAGGCGAGCAGCT
TTAAATGGATTGGAGTGGTTGTGCAGTCAATTTCAATGTGGGACCTTTCTTCAGTGCAAAATTTGGTTCCAATGTCATTCAATACAAGAAAACTTCTCTCTGCTTGGCAA
ATTTGATGGCTTAAATTTTAGTTTGTTAGTTTTTCTTTCTGTCACAAATATTTGTAAGTTGTCTGTACTACTAGTTAGTATTTATATTGAAGGTTGAAGAAGG
Protein sequenceShow/hide protein sequence
MGLSNFPPSAEGALLLPVLVMNTVTSMNFLKNLVRSVIQMMGTIGNPSDYEEEFDWENGRERRISNTQFKTLRQSFNGGTECCVCLCGFEADEEISELSCKHFFHKGCLS
KWFDNKHFTCPLCRSID