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Sed0005835 (gene) of Chayote v1 genome

Gene IDSed0005835
OrganismSechium edule (Chayote v1)
Descriptioncoiled-coil domain-containing glutamate-rich protein 1
Genome locationLG11:33975920..33976381
RNA-Seq ExpressionSed0005835
SyntenySed0005835
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578611.1 hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4369.23Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFT---SNDGSYSEIQTQE---PIKQNNIKTREF
        M RAEE++RE+K  EVEDKDS+ T LLS GT L MAACLK+AVVLFLVEQWRIWVFL+LNLILVAIFFT   S+  SYSE QTQE    IKQ  I+ RE 
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFT---SNDGSYSEIQTQE---PIKQNNIKTREF

Query:  KEIEKVQKVEIQQLE-----------IEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG
        KE EKV+K+EI+  E            EE+EE EEEEEIGLSKEELNERVEAFIVMFKKQLI DAR+GG
Subjt:  KEIEKVQKVEIQQLE-----------IEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG

KAG7016160.1 hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4368.42Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFT---SNDGSYSEIQTQE---PIKQNNIKTREF
        M RAEE++RE+K  EVEDKDS+ T LLS GT L MAACLK+AVVLFLVEQWRIWVFL+LNLILVAIFFT   S+  SYSE QTQE    IKQ  I+ RE 
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFT---SNDGSYSEIQTQE---PIKQNNIKTREF

Query:  KEIEKVQKVEIQQL-------------EIEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG
        KE EKV+K+EI+               E EE+EE EEEEEIGLSKEELNERVEAFIVMFKKQLI DAR+GG
Subjt:  KEIEKVQKVEIQQL-------------EIEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG

XP_022134128.1 coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia]8.4e-4167.46Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPI---KQNNIKTREFKEI
        M +AEEN+RETK GEVEDKDS+ T LLS GT L MAACLK+AVVLFLVEQWR+WVFLVLNLI+VAIFFTS+  +Y E  +Q+P    KQ  IK RE K  
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPI---KQNNIKTREFKEI

Query:  -EKVQKV-----------EIQQLEIEEQEEIEEEE--EIGLSKEELNERVEAFIVMFKKQLILDARKGG
         EKV+KV           EI++ EIEE+EE EEEE  ++GLSKEELNERVEAFIVMFK+QLILDARKGG
Subjt:  -EKVQKV-----------EIQQLEIEEQEEIEEEE--EIGLSKEELNERVEAFIVMFKKQLILDARKGG

XP_022959957.1 uncharacterized protein LOC111460852 [Cucurbita moschata]1.7e-4171.15Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEK
        M RAEE  RE+K GEVEDKD  S G+LS GT L MAACLK+AVVL FLVEQWRIWVFL LNLILV IFFTS+  SYSE QTQEP K+  I++    E EK
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEK

Query:  VQKVEIQQLEIEEQEEIEEEEE---IGLSKEELNERVEAFIVMFKKQLILDARKGG
        V++VEI+Q E++++EEIEE+EE   IGLSKEELNERVEAFIVMFKKQLI DARK G
Subjt:  VQKVEIQQLEIEEQEEIEEEEE---IGLSKEELNERVEAFIVMFKKQLILDARKGG

XP_038890929.1 uncharacterized protein LOC120080357 [Benincasa hispida]1.8e-4374.34Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEKV
        M RAEE++RE K GEVEDKDS+   LLS GT L MAACLKKAVV+FLVEQWRIWVFLVLNLILVAIFFTS+  SYSE Q +E  KQ  IK RE KE EK 
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEKV

Query:  QKVEIQQLEIEE-QEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKG
        +  E +++E EE +EE EEEEEIGLSKEELNERVEAFIVMFKKQLI DARKG
Subjt:  QKVEIQQLEIEE-QEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKG

TrEMBL top hitse value%identityAlignment
A0A0A0KVE3 Uncharacterized protein1.8e-3360.8Show/hide
Query:  MLRAEENHRETKL-GEVEDKDSLSTGLLSVGTVLFMAACLKK-AVVLFLVEQWRIWVFLVLNLILVAIFFTS---NDGSYSEIQTQEPIKQNNIKTREFK
        M R EE +RE K  GE EDKDS+   LLS GT L MA CLKK AVV+FLVEQWRIWVFLVLNLILVAIFFTS   N  +YSE Q QE   +  +K  E +
Subjt:  MLRAEENHRETKL-GEVEDKDSLSTGLLSVGTVLFMAACLKK-AVVLFLVEQWRIWVFLVLNLILVAIFFTS---NDGSYSEIQTQEPIKQNNIKTREFK

Query:  EIE---------KVQKVEIQQL--------EIEEQEEI--EEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG
        E+E         K +K+E +++        EI+E++EI  EEEEEI LSKEELNERVEAFIVMFKKQLI DARKGG
Subjt:  EIE---------KVQKVEIQQL--------EIEEQEEI--EEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG

A0A1S3C9Q4 ABC transporter F family member 41.2e-3764.71Show/hide
Query:  MLRAEENHRETKL-GEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPI------KQNNIKTRE
        M R EE +RE K  GE EDKDS+   LLS GT L MA CLKKAVV+FLVEQWRIWVFL LNLILVAIFFTSN  +YSE Q QE        K  NI+ +E
Subjt:  MLRAEENHRETKL-GEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPI------KQNNIKTRE

Query:  FKEIE---KVQKVEIQQL--------EIEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG
         K+ E   K +K E ++         EIEE+EE EEEEEIGLSKEELNERVEAFIVMFKKQLI DARKGG
Subjt:  FKEIE---KVQKVEIQQL--------EIEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGG

A0A6J1C149 coiled-coil domain-containing glutamate-rich protein 14.1e-4167.46Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPI---KQNNIKTREFKEI
        M +AEEN+RETK GEVEDKDS+ T LLS GT L MAACLK+AVVLFLVEQWR+WVFLVLNLI+VAIFFTS+  +Y E  +Q+P    KQ  IK RE K  
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPI---KQNNIKTREFKEI

Query:  -EKVQKV-----------EIQQLEIEEQEEIEEEE--EIGLSKEELNERVEAFIVMFKKQLILDARKGG
         EKV+KV           EI++ EIEE+EE EEEE  ++GLSKEELNERVEAFIVMFK+QLILDARKGG
Subjt:  -EKVQKV-----------EIQQLEIEEQEEIEEEE--EIGLSKEELNERVEAFIVMFKKQLILDARKGG

A0A6J1H605 uncharacterized protein LOC1114608528.2e-4271.15Show/hide
Query:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEK
        M RAEE  RE+K GEVEDKD  S G+LS GT L MAACLK+AVVL FLVEQWRIWVFL LNLILV IFFTS+  SYSE QTQEP K+  I++    E EK
Subjt:  MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEK

Query:  VQKVEIQQLEIEEQEEIEEEEE---IGLSKEELNERVEAFIVMFKKQLILDARKGG
        V++VEI+Q E++++EEIEE+EE   IGLSKEELNERVEAFIVMFKKQLI DARK G
Subjt:  VQKVEIQQLEIEEQEEIEEEEE---IGLSKEELNERVEAFIVMFKKQLILDARKGG

A0A6J1JR04 uncharacterized protein LOC1114870562.3e-2871.09Show/hide
Query:  MAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEKVQKVEIQQLEIEEQEEI---EEEEEIGLSKE---
        MAACLK+AVVL FLVEQWRIWVFLVLNLILV IFFTS+  SYSE Q QEP K+  I+     E EKV++VEI+Q EI ++EEI   EEEEEIGLSKE   
Subjt:  MAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEKVQKVEIQQLEIEEQEEI---EEEEEIGLSKE---

Query:  ---ELNERVEAFIVMFKKQLILDARKGG
           ELNERVEAFIVMFKKQLI DARK G
Subjt:  ---ELNERVEAFIVMFKKQLILDARKGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28420.1 Putative membrane lipoprotein1.4e-0933.89Show/hide
Query:  DKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTS---NDGSYSEIQTQE-------PIKQNNIKTR---------------
        +++++ T LL+   VL MA     + V +L+EQWR  VFL+LN++L+A++FTS   N G   + +T+          K+N IK +               
Subjt:  DKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTS---NDGSYSEIQTQE-------PIKQNNIKTR---------------

Query:  ---EFKEI------------------EKVQKVEIQQLEIEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKG
           E KE+                  E V+     + EIE   E +E E   LS EELNERVEAFI  F++ L+LDAR+G
Subjt:  ---EFKEI------------------EKVQKVEIQQLEIEEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGGCAGAAGAAAATCACAGAGAAACCAAGCTTGGAGAGGTTGAAGATAAAGATTCTTTAAGCACAGGTTTGCTGTCAGTTGGAACTGTATTGTTTATGGCAGC
TTGTTTGAAAAAGGCTGTGGTTTTGTTCTTGGTTGAGCAATGGAGGATTTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACTTCTAATGATGGAA
GTTATAGTGAAATCCAAACCCAAGAGCCAATAAAGCAGAACAACATAAAAACCAGAGAGTTTAAGGAGATTGAAAAAGTACAAAAGGTTGAGATTCAACAGCTAGAAATT
GAAGAACAAGAGGAAATTGAAGAAGAGGAGGAAATTGGGTTGTCAAAAGAGGAGTTGAATGAGAGAGTTGAAGCTTTTATTGTGATGTTTAAGAAGCAATTGATTTTAGA
TGCAAGAAAAGGGGGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGGCAGAAGAAAATCACAGAGAAACCAAGCTTGGAGAGGTTGAAGATAAAGATTCTTTAAGCACAGGTTTGCTGTCAGTTGGAACTGTATTGTTTATGGCAGC
TTGTTTGAAAAAGGCTGTGGTTTTGTTCTTGGTTGAGCAATGGAGGATTTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACTTCTAATGATGGAA
GTTATAGTGAAATCCAAACCCAAGAGCCAATAAAGCAGAACAACATAAAAACCAGAGAGTTTAAGGAGATTGAAAAAGTACAAAAGGTTGAGATTCAACAGCTAGAAATT
GAAGAACAAGAGGAAATTGAAGAAGAGGAGGAAATTGGGTTGTCAAAAGAGGAGTTGAATGAGAGAGTTGAAGCTTTTATTGTGATGTTTAAGAAGCAATTGATTTTAGA
TGCAAGAAAAGGGGGGAAATAG
Protein sequenceShow/hide protein sequence
MLRAEENHRETKLGEVEDKDSLSTGLLSVGTVLFMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSNDGSYSEIQTQEPIKQNNIKTREFKEIEKVQKVEIQQLEI
EEQEEIEEEEEIGLSKEELNERVEAFIVMFKKQLILDARKGGK