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Sed0005851 (gene) of Chayote v1 genome

Gene IDSed0005851
OrganismSechium edule (Chayote v1)
DescriptionSialidase-like isoform X3
Genome locationLG11:2367912..2368785
RNA-Seq ExpressionSed0005851
SyntenySed0005851
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33904.1 hypothetical protein [Cucumis melo subsp. melo]2.1e-3346.67Show/hide
Query:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------
        MADFRYGFF R         PEE  + GH  + KS+   +D   R++P  +LP TRYV   E +TEEV           H KKYEP+K+ D         
Subjt:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------

Query:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE
              FNKL+AK   +   PK+++  LSEPMNDI KAIE  KE VNL  SK    +  +  K   TKTID   AARRYG FGA   V  AN ATI+CKE
Subjt:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE

Query:  AARKYKGATV
        AARKY GA V
Subjt:  AARKYKGATV

KAA0063635.1 hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa]7.1e-3447.14Show/hide
Query:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------
        MADFRYGFF R         PEE  + GH  + KS+   +DA  R++P  +LP TRYV   E +TEEV           H KKYEP+K+ D         
Subjt:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------

Query:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE
              FNKL+AK   +   PK+++  LSEPMNDI KAIE  KE VNL  SK    +  +  K   TKTID   AARRYG FGA   V  AN ATI+CKE
Subjt:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE

Query:  AARKYKGATV
        AARKY GA V
Subjt:  AARKYKGATV

KAG6599284.1 putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4552.58Show/hide
Query:  MADFRYGFFRRP---------EENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVK----HHD-----
        MADFRYGFF RP         EE   T H  D K +   VDA  RR P  VLP  RYV TTETYTEE   +SRD   +SH K  EPVK    HHD     
Subjt:  MADFRYGFFRRP---------EENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVK----HHD-----

Query:  -----------FNKLIAKVPRDASQPKHDVSLSEPMNDIHKAIEFFKEVVNL-HTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVAT
                   FN+L+ KV  +  Q KH++ +S+PMNDI KAIEFFKE VNL +     C   DHPKK  +TKTID + AARR+GNFG PPPV  AN AT
Subjt:  -----------FNKLIAKVPRDASQPKHDVSLSEPMNDIHKAIEFFKEVVNL-HTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVAT

Query:  IDCKEAARKYKGA
        I+CKEAARKYK +
Subjt:  IDCKEAARKYKGA

KDO53349.1 hypothetical protein CISIN_1g043550mg [Citrus sinensis]3.9e-0842.39Show/hide
Query:  DVSLSEPMNDIHKAIEFFKE------VVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV
        D SLS P NDI+ A+ + +E      V     S+     T  P++ D+ +TID   AARRYGN G+ P        TID +EAARKY+G TV
Subjt:  DVSLSEPMNDIHKAIEFFKE------VVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV

KGN60838.1 hypothetical protein Csa_019431 [Cucumis sativus]1.5e-3951.18Show/hide
Query:  MADFRYGFFRRPEENR----------KTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD--------
        MADFRYGFF RP+  +          K GH  D KS+   +DA  R+QPI +LP TRYV   E YTEEV           H KKYEPVK+ D        
Subjt:  MADFRYGFFRRPEENR----------KTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD--------

Query:  -------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCK
               FNKL+A V ++A  PK+++  LSEPM DI KAIE  KEVVNL  SK         +K   TKTID   AARRYG FGAP PV  ANVATIDCK
Subjt:  -------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCK

Query:  EAARKYKGATV
        EAARKY GA V
Subjt:  EAARKYKGATV

TrEMBL top hitse value%identityAlignment
A0A067EDT6 Uncharacterized protein1.9e-0842.39Show/hide
Query:  DVSLSEPMNDIHKAIEFFKE------VVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV
        D SLS P NDI+ A+ + +E      V     S+     T  P++ D+ +TID   AARRYGN G+ P        TID +EAARKY+G TV
Subjt:  DVSLSEPMNDIHKAIEFFKE------VVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV

A0A0A0LG87 Uncharacterized protein7.1e-4051.18Show/hide
Query:  MADFRYGFFRRPEENR----------KTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD--------
        MADFRYGFF RP+  +          K GH  D KS+   +DA  R+QPI +LP TRYV   E YTEEV           H KKYEPVK+ D        
Subjt:  MADFRYGFFRRPEENR----------KTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD--------

Query:  -------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCK
               FNKL+A V ++A  PK+++  LSEPM DI KAIE  KEVVNL  SK         +K   TKTID   AARRYG FGAP PV  ANVATIDCK
Subjt:  -------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCK

Query:  EAARKYKGATV
        EAARKY GA V
Subjt:  EAARKYKGATV

A0A5A7VCJ6 Uncharacterized protein3.4e-3447.14Show/hide
Query:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------
        MADFRYGFF R         PEE  + GH  + KS+   +DA  R++P  +LP TRYV   E +TEEV           H KKYEP+K+ D         
Subjt:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------

Query:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE
              FNKL+AK   +   PK+++  LSEPMNDI KAIE  KE VNL  SK    +  +  K   TKTID   AARRYG FGA   V  AN ATI+CKE
Subjt:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE

Query:  AARKYKGATV
        AARKY GA V
Subjt:  AARKYKGATV

E5GBR2 Uncharacterized protein9.9e-3446.67Show/hide
Query:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------
        MADFRYGFF R         PEE  + GH  + KS+   +D   R++P  +LP TRYV   E +TEEV           H KKYEP+K+ D         
Subjt:  MADFRYGFFRR---------PEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHD---------

Query:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE
              FNKL+AK   +   PK+++  LSEPMNDI KAIE  KE VNL  SK    +  +  K   TKTID   AARRYG FGA   V  AN ATI+CKE
Subjt:  ------FNKLIAKVPRDASQPKHDVS-LSEPMNDIHKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKE

Query:  AARKYKGATV
        AARKY GA V
Subjt:  AARKYKGATV

V4T4K4 Uncharacterized protein1.9e-0842.39Show/hide
Query:  DVSLSEPMNDIHKAIEFFKE------VVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV
        D SLS P NDI+ A+ + +E      V     S+     T  P++ D+ +TID   AARRYGN G+ P        TID +EAARKY+G TV
Subjt:  DVSLSEPMNDIHKAIEFFKE------VVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTTTCGATACGGTTTCTTTCGTCGACCTGAAGAAAATAGGAAAACAGGCCATGCCCTTGATCACAAATCAAGGCTAGGTCGTGTCGATGCAGAAGAAAGGCG
ACAACCTATCACTGTTTTGCCTGGAACAAGGTACGTTATGACAACCGAGACGTATACCGAAGAAGTTTGCTTAAGTTCAAGAGATGAGTCCCCACATAGCCATGCCAAGA
AGTATGAACCAGTGAAGCATCATGATTTCAATAAGCTCATAGCCAAAGTCCCAAGAGATGCAAGCCAGCCAAAACATGACGTGAGCTTAAGTGAACCAATGAATGATATT
CATAAGGCCATAGAGTTTTTCAAAGAAGTTGTAAATCTTCACACTAGCAAGTACCCTTGTGCTACAACAGATCATCCTAAGAAATATGACCACACGAAAACTATTGACCA
TGACGGAGCGGCTCGAAGATACGGGAATTTCGGTGCACCACCCCCGGTGCTAGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGCAA
CAGTGTGA
mRNA sequenceShow/hide mRNA sequence
CAGGTCCCTATATAAACCATTCAGAAGCAAAGAAAAAAAGCCACAAAGGTCTCTAAGGCATAAAGAGTAAATCGCACTCATTACCCCATGGCTGATTTTCGATACGGTTT
CTTTCGTCGACCTGAAGAAAATAGGAAAACAGGCCATGCCCTTGATCACAAATCAAGGCTAGGTCGTGTCGATGCAGAAGAAAGGCGACAACCTATCACTGTTTTGCCTG
GAACAAGGTACGTTATGACAACCGAGACGTATACCGAAGAAGTTTGCTTAAGTTCAAGAGATGAGTCCCCACATAGCCATGCCAAGAAGTATGAACCAGTGAAGCATCAT
GATTTCAATAAGCTCATAGCCAAAGTCCCAAGAGATGCAAGCCAGCCAAAACATGACGTGAGCTTAAGTGAACCAATGAATGATATTCATAAGGCCATAGAGTTTTTCAA
AGAAGTTGTAAATCTTCACACTAGCAAGTACCCTTGTGCTACAACAGATCATCCTAAGAAATATGACCACACGAAAACTATTGACCATGACGGAGCGGCTCGAAGATACG
GGAATTTCGGTGCACCACCCCCGGTGCTAGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCAAGGAAGTATAAAGGTGCAACAGTGTGAAACCAAGTGAAAGAG
GATGCTTTGTTATGTAATGATAAGACAAGGTTTGAAAATGTAGCTACTGTTTCAAGACTCAATAGTGTTTCTTGCTTTTGTTTGCAGCCATCAATAAAGTTTAGTAAAGG
TGTGAAATTATAAGTTTAGCTAAATCTATCAACTTTCAATTTTGTGTGCAATAAGGTGATTTTTTTAAAGATGCCTGATAATTTTATTAATTTTCAATATCCAC
Protein sequenceShow/hide protein sequence
MADFRYGFFRRPEENRKTGHALDHKSRLGRVDAEERRQPITVLPGTRYVMTTETYTEEVCLSSRDESPHSHAKKYEPVKHHDFNKLIAKVPRDASQPKHDVSLSEPMNDI
HKAIEFFKEVVNLHTSKYPCATTDHPKKYDHTKTIDHDGAARRYGNFGAPPPVLGANVATIDCKEAARKYKGATV