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Sed0005869 (gene) of Chayote v1 genome

Gene IDSed0005869
OrganismSechium edule (Chayote v1)
DescriptionStress induced protein
Genome locationLG08:4283603..4284223
RNA-Seq ExpressionSed0005869
SyntenySed0005869
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587852.1 hypothetical protein SDJN03_16417, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2859.09Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ +Q  L D DEAVPSNGC CF+L G  F+R  +YE+          EEE W+V   KKLKEV EMVAGPKWKNFI K  G    KKQ+NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD
        YALNF    D EDD   IGFSSRFAVP  SR+
Subjt:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD

XP_011648475.1 uncharacterized protein LOC105434480 [Cucumis sativus]3.2e-2858.21Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKLK---EVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ QQ DL DID+++ SNGCGCF+L G   +R  +YE        Q  EEESW+VK+LK   EV EMVAGPKWKNFI K  G    KK++NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKLK---EVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNFD-----EEDDGF-SIGFSSRFAVPFPSRD
        YALNFD     EEDD    IGFSSRFAVP  SR+
Subjt:  YALNFD-----EEDDGF-SIGFSSRFAVPFPSRD

XP_022927019.1 uncharacterized protein LOC111433973 [Cucurbita moschata]2.5e-2858.33Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ +Q  L D DEA+PSNGC CF+L G  F+R  +YE+          EEE W+V   KKLKEV EMVAGPKWKNFI K  G    KKQ+NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD
        YALNF    D EDD   IGFSSRFAVP  SR+
Subjt:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD

XP_023003195.1 uncharacterized protein LOC111496880 [Cucurbita maxima]4.2e-2858.33Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ +Q  L D DEAVPSNGC CF+L G  F+R  +YE+          EEE W+V   KKLKEV EMVAGPKWKNFI K  G    +KQ+NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD
        YALNF    D EDD   IGFSSRFAVP  SR+
Subjt:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD

XP_038876901.1 uncharacterized protein LOC120069255 [Benincasa hispida]3.1e-3161.19Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ QQ DL D+DEAVPSNGCGCFRL G  F+R  +YE        Q  EEESW+V   KK+KEV EMVAGPKWKNF+ K  G    KKQ+NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNFD-----EEDDGF-SIGFSSRFAVPFPSRD
        YALNFD     EED+    IGFSSRFAVP  SR+
Subjt:  YALNFD-----EEDDGF-SIGFSSRFAVPFPSRD

TrEMBL top hitse value%identityAlignment
A0A0A0LTG0 Uncharacterized protein1.6e-2858.21Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKLK---EVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ QQ DL DID+++ SNGCGCF+L G   +R  +YE        Q  EEESW+VK+LK   EV EMVAGPKWKNFI K  G    KK++NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKLK---EVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNFD-----EEDDGF-SIGFSSRFAVPFPSRD
        YALNFD     EEDD    IGFSSRFAVP  SR+
Subjt:  YALNFD-----EEDDGF-SIGFSSRFAVPFPSRD

A0A1S3B8N4 uncharacterized protein LOC1034873832.7e-2859.26Show/hide
Query:  PPMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKL---KEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPV
        P    QQ DL DID+++ SNGCGCF+L G   +R  +YE        Q  EEESW+VKKL   KEV EMVAGPKWKNFI K  G    KKQ+NRFQYDP 
Subjt:  PPMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKL---KEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPV

Query:  SYALNFD-----EEDDGF-SIGFSSRFAVPFPSRD
        SYALNFD     EEDD    IGFSSRFAVP  SR+
Subjt:  SYALNFD-----EEDDGF-SIGFSSRFAVPFPSRD

A0A5A7U6Q0 Uncharacterized protein2.7e-2859.26Show/hide
Query:  PPMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKL---KEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPV
        P    QQ DL DID+++ SNGCGCF+L G   +R  +YE        Q  EEESW+VKKL   KEV EMVAGPKWKNFI K  G    KKQ+NRFQYDP 
Subjt:  PPMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYE--------QVEEEESWIVKKL---KEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPV

Query:  SYALNFD-----EEDDGF-SIGFSSRFAVPFPSRD
        SYALNFD     EEDD    IGFSSRFAVP  SR+
Subjt:  SYALNFD-----EEDDGF-SIGFSSRFAVPFPSRD

A0A6J1EGU0 uncharacterized protein LOC1114339731.2e-2858.33Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ +Q  L D DEA+PSNGC CF+L G  F+R  +YE+          EEE W+V   KKLKEV EMVAGPKWKNFI K  G    KKQ+NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD
        YALNF    D EDD   IGFSSRFAVP  SR+
Subjt:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD

A0A6J1KR34 uncharacterized protein LOC1114968802.0e-2858.33Show/hide
Query:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS
        P++ +Q  L D DEAVPSNGC CF+L G  F+R  +YE+          EEE W+V   KKLKEV EMVAGPKWKNFI K  G    +KQ+NRFQYDP S
Subjt:  PMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQ--------VEEEESWIV---KKLKEVLEMVAGPKWKNFIIKKMGI---KKQKNRFQYDPVS

Query:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD
        YALNF    D EDD   IGFSSRFAVP  SR+
Subjt:  YALNF----DEEDDGFSIGFSSRFAVPFPSRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)1.2e-0427.16Show/hide
Query:  MSSQQPDL------DDIDEAV-PSNGCGCFRLCGLR------------FDREADYEQVEEEESWIV---KKLKEVLEMVAGPKWKNFIIK----------
        MS Q P +      DD+ EA+    GC CF +  L             + R    +++E +E W +   ++++E  E+VAGP+WK +I +          
Subjt:  MSSQQPDL------DDIDEAV-PSNGCGCFRLCGLR------------FDREADYEQVEEEESWIV---KKLKEVLEMVAGPKWKNFIIK----------

Query:  --KMG-------------IKKQKNRFQYDPVSYALNFDEE------DDGFSI-GFSSRFAVP
          ++G                 + +F+YD +SY+LNFD+       DD F    +S RFA P
Subjt:  --KMG-------------IKKQKNRFQYDPVSYALNFDEE------DDGFSI-GFSSRFAVP

AT3G48020.1 unknown protein1.1e-0538.2Show/hide
Query:  EEESWIVK---KLKEVLEMVAGPKWKNFIIKKMGIKKQ------KNRFQYDPVSYALNFDEE----DDGFSIG----FSSRFA-VPFPS
        +E  W V+   K++E  E+VAGP+WK FI +     ++       ++F+YDPVSY L+F++E    DD   +G    FS R+A VP  S
Subjt:  EEESWIVK---KLKEVLEMVAGPKWKNFIIKKMGIKKQ------KNRFQYDPVSYALNFDEE----DDGFSIG----FSSRFA-VPFPS

AT5G14890.1 NHL domain-containing protein1.4e-0538.3Show/hide
Query:  EQVEEEESWIVK---KLKEVLEMVAGPKWKNFIIK-------KMGIKKQKNR-----FQYDPVSYALNFDE-------EDDGFSIGFSSRFAVP
        +++E +E W V    K++E  E+VAGPKWK FI +         GI    NR     F+YD  SY+LNFD+       ED+     +S RFA P
Subjt:  EQVEEEESWIVK---KLKEVLEMVAGPKWKNFIIK-------KMGIKKQKNR-----FQYDPVSYALNFDE-------EDDGFSIGFSSRFAVP

AT5G25240.1 unknown protein3.6e-0938.1Show/hide
Query:  DDIDEAVPSNGCGCFRLCGLRFDREADYE-----------QVEEEESW---IVKKLKEVLEMVAGPKWKNFIIKKMGIKKQKNR---FQYDPVSYALNFD
        DD +E     GCG FR       R  D E           Q E   +W    +K LKE+ E +AGPKWKNFI      +K+  R   F YD  +Y+LNFD
Subjt:  DDIDEAVPSNGCGCFRLCGLRFDREADYE-----------QVEEEESW---IVKKLKEVLEMVAGPKWKNFIIKKMGIKKQKNR---FQYDPVSYALNFD

Query:  EEDDG
        +  DG
Subjt:  EEDDG

AT5G62865.1 unknown protein3.4e-0740.96Show/hide
Query:  EEESWIVK---KLKEVLEMVAGPKWKNFIIKKMGIKKQKNR-------FQYDPVSYALNF---DEEDDGFSIG----FSSRFA
        +E  W ++   K++E  E+VAGP+WK F I++     ++ R       FQYDP+SY+LNF   DEED+   +G    FS+RFA
Subjt:  EEESWIVK---KLKEVLEMVAGPKWKNFIIKKMGIKKQKNR-------FQYDPVSYALNF---DEEDDGFSIG----FSSRFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACAAACTCCCATCAGTATCAACAAAATCCCCATTTACTTCAGAAAAACATCCCTCCCATGTCGAGCCAACAACCAGACCTCGACGACATCGACGAAGCCGT
TCCCTCGAACGGGTGCGGCTGTTTTCGCCTTTGCGGGTTGAGGTTCGATCGGGAGGCCGACTACGAGCAGGTGGAGGAAGAGGAATCTTGGATAGTGAAGAAGCTGAAGG
AGGTTTTGGAAATGGTGGCTGGACCCAAATGGAAGAATTTCATTATTAAAAAAATGGGAATCAAAAAACAGAAGAACAGGTTTCAGTATGATCCTGTAAGCTATGCTTTG
AATTTCGATGAAGAAGACGATGGTTTCTCTATTGGATTTTCTTCTAGATTTGCTGTGCCTTTTCCTTCGAGGGACTAA
mRNA sequenceShow/hide mRNA sequence
TTATGAGTCATAAGAATTATTTTTCAATTTTTGAGAGAAAAAACCAAAGGGGCTTTGAGCATAATTCAAAGTTTCTGCGATATTTCGTATCTCCTTTATATATCCCCTTC
AAATGGCTTCCACAAACTCCCATCAGTATCAACAAAATCCCCATTTACTTCAGAAAAACATCCCTCCCATGTCGAGCCAACAACCAGACCTCGACGACATCGACGAAGCC
GTTCCCTCGAACGGGTGCGGCTGTTTTCGCCTTTGCGGGTTGAGGTTCGATCGGGAGGCCGACTACGAGCAGGTGGAGGAAGAGGAATCTTGGATAGTGAAGAAGCTGAA
GGAGGTTTTGGAAATGGTGGCTGGACCCAAATGGAAGAATTTCATTATTAAAAAAATGGGAATCAAAAAACAGAAGAACAGGTTTCAGTATGATCCTGTAAGCTATGCTT
TGAATTTCGATGAAGAAGACGATGGTTTCTCTATTGGATTTTCTTCTAGATTTGCTGTGCCTTTTCCTTCGAGGGACTAATAGTTTGAAGAATTGATTAATTCTAATTAT
GATGCTAATTATGTACAAGTGTTTCATGTGTTATTTGTTCATTAGTGTGTATATATGGAGATGTTTTTATT
Protein sequenceShow/hide protein sequence
MASTNSHQYQQNPHLLQKNIPPMSSQQPDLDDIDEAVPSNGCGCFRLCGLRFDREADYEQVEEEESWIVKKLKEVLEMVAGPKWKNFIIKKMGIKKQKNRFQYDPVSYAL
NFDEEDDGFSIGFSSRFAVPFPSRD