CuGenDBv2

Gene ID	Sed0005872
Organism	Sechium edule (Chayote v1)
Description	phosphatidylinositol-glycan biosynthesis class F protein
Genome location	LG05:26854847..26855654
RNA-Seq Expression	Sed0005872
Synteny	Sed0005872
Gene Ontology terms	GO:0006506 - GPI anchor biosynthetic process (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0051377 - mannose-ethanolamine phosphotransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606849.1 Phosphatidylinositol-glycan biosynthesis class F protein, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-29

78.12

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME+EKKE A KAS  VS+AEAF V LIC LGLALAF IAR+ YS DLISDPS+  FLI + E PIVILLYSRYRTDREQCSYLKAVARGILGLL G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

XP_022949007.1 phosphatidylinositol-glycan biosynthesis class F protein [Cucurbita moschata]

3.2e-30

79.17

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME+EKKE ASKAS  VS+AEAF V LIC LGLALAF IAR+ YS DLISDPS+  FLI + E PIVILLYSRYRTDREQCSYLKAVARGILGLL G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

XP_022998495.1 phosphatidylinositol-glycan biosynthesis class F protein [Cucurbita maxima]

2.5e-30

78.12

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME+EKKE  SKAS PVS+AEAF V LIC LGLALAF IAR+ YS DLISDPS+  FLI + E PIVILLYSRYRTDREQCSYLKA+ARGILGLL G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

XP_023524788.1 phosphatidylinositol-glycan biosynthesis class F protein [Cucurbita pepo subsp. pepo]

1.1e-30

79.17

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME+EKKE  SKAS PVS+AEAF V LIC LGLALAF IAR+ YS DLISDPS+  FLI + E PIVILLYSRYRTDREQCSYLKAVARGILGLL G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

XP_038904140.1 phosphatidylinositol-glycan biosynthesis class F protein [Benincasa hispida]

3.0e-28

72.92

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME EKKE A +AS P+S++EAF + LIC+LGLALAFWIAR  YS DLISDPS+  FLI   E PIVILLYSRYRTDR+QCSYLKAVARG+LGL  G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T0F5 Glycosylphosphatidylinositol anchor biosynthesis protein 11

6.1e-27

69.79

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME EKKE ASK+S P+S+ EAF + LI +LGLALAFWIA   +S DLISDPS+  F I V + PIVILLYSRYRTDR QCSYLKAVARG+LGL  G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

A0A5A7TML7 Glycosylphosphatidylinositol anchor biosynthesis protein 11

1.4e-26

70.97

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGL
        ME EKKE ASK+S P+S+ EAF + LI +LGLALAFWIA   +S DLISDPS+  F I V + PIVILLYSRYRTDR QCSYLKAVARG+LGL
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGL

A0A6J1DKK8 phosphatidylinositol-glycan biosynthesis class F protein

2.0e-25

72.83

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Query:  KKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        +KE ASKA   VS+AEAF+V LIC LGLALA WIAR  YS DLIS+PS   FLI   E PIVILLYSRYR DREQCSYLKAV RGILGL  G
Subjt:  KKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

A0A6J1GAT8 phosphatidylinositol-glycan biosynthesis class F protein

1.6e-30

79.17

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME+EKKE ASKAS  VS+AEAF V LIC LGLALAF IAR+ YS DLISDPS+  FLI + E PIVILLYSRYRTDREQCSYLKAVARGILGLL G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

A0A6J1KCP2 phosphatidylinositol-glycan biosynthesis class F protein

1.2e-30

78.12

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Query:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        ME+EKKE  SKAS PVS+AEAF V LIC LGLALAF IAR+ YS DLISDPS+  FLI + E PIVILLYSRYRTDREQCSYLKA+ARGILGLL G
Subjt:  MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16040.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

9.0e-15

43.01

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Query:  EKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG
        EKK      S  +S   AF V +I  L L   F + RN YS+DLISDP+    L+ + E PIV+++YS +R + E+CSY +AV R ++GL+ G
Subjt:  EKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

Sequences

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CDS sequence

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ATGGAGTCGGAGAAGAAAGAAACGGCCAGTAAAGCTTCGAATCCCGTTTCGATGGCAGAGGCGTTCATTGTCCAGCTGATCTGCAGCCTCGGACTAGCCCTAGCTTTCTG
GATTGCTCGCAATGCTTACTCCATTGATCTCATCTCGGATCCTTCTCAGCCTCACTTCTTGATTCCGGTTGCTGAGCCTCCGATTGTGATTCTTCTCTACAGCCGCTATC
GTACGGATCGAGAGCAATGTTCGTACTTGAAAGCTGTGGCGCGAGGCATTCTTGGACTCCTTGTTGGTTAG

mRNA sequence

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GTGGACCATTTGCCGTATGAGCTGCGAAAAAAGAATACAGAAATGGAGTCGGAGAAGAAAGAAACGGCCAGTAAAGCTTCGAATCCCGTTTCGATGGCAGAGGCGTTCAT
TGTCCAGCTGATCTGCAGCCTCGGACTAGCCCTAGCTTTCTGGATTGCTCGCAATGCTTACTCCATTGATCTCATCTCGGATCCTTCTCAGCCTCACTTCTTGATTCCGG
TTGCTGAGCCTCCGATTGTGATTCTTCTCTACAGCCGCTATCGTACGGATCGAGAGCAATGTTCGTACTTGAAAGCTGTGGCGCGAGGCATTCTTGGACTCCTTGTTGGT
TAGTCGGAGAAAAAACTCGTTCTATTTGCCTGCATTTGATTTGTACTCGTTTAGTTAGCTTTGAGTGTTTTGAAGATGTTCTACGCCTGTTCTTTTAACTAAGTACATTG
AGGATTGGAATTTTGTGTGCGAAAATCGTACAGATGTTGATTTAAATTCATTGACTGCTTCTTGAAACGTGTATGGCTCAATTTGATATGAAATGAGACTTTAAATTTCG
TGATGTGAGAGATTTTCAATGTGTCCACGAGGAAGGATTCTAATAGTTGGAGCCATTTGGTG

Protein sequence

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MESEKKETASKASNPVSMAEAFIVQLICSLGLALAFWIARNAYSIDLISDPSQPHFLIPVAEPPIVILLYSRYRTDREQCSYLKAVARGILGLLVG

Sed0005872 (gene) of Chayote v1 genome