CuGenDBv2

Gene ID	Sed0005907
Organism	Sechium edule (Chayote v1)
Description	GPN-loop GTPase 1
Genome location	LG03:43474566..43475137
RNA-Seq Expression	Sed0005907
Synteny	Sed0005907
Gene Ontology terms	GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR004130 - GPN-loop GTPase

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008441779.1 PREDICTED: GPN-loop GTPase 1 [Cucumis melo]

3.1e-19

70.21

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDE-DDDYSRLMIE----YEDEDDEVARFSF
        +AE+DKR+ EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDDKSKTKMV++++ EI+EEDE DDDY R   E     EDED+EVARFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDE-DDDYSRLMIE----YEDEDDEVARFSF

XP_022929726.1 GPN-loop GTPase 1-like [Cucurbita moschata]

3.1e-19

71.28

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF
        +AE+DKRI EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDDKSKTKMV+ E+EEI+EE+EDD DY+R   E     EDED+EV RFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF

XP_022997330.1 GPN-loop GTPase 1-like [Cucurbita maxima]

3.1e-19

71.28

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF
        +AE+DKRI EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDD+SKTKMV+ E+EEI+EE+EDD DY+R   E     EDED+EVARFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF

XP_023546615.1 GPN-loop GTPase 1-like [Cucurbita pepo subsp. pepo]

1.1e-19

72.34

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF
        +AE+DKRI EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDDKSKTKMV+ E+EEI+EE+EDD DY+R   E     EDED+EVARFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF

XP_038890581.1 GPN-loop GTPase QQT2 [Benincasa hispida]

3.1e-19

69.15

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDE-DDDYSRLMIE----YEDEDDEVARFSF
        +AE+DKR+ EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDDK+KTK+V++++EEI+EEDE DDDY R   E     EDED+EVARFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDE-DDDYSRLMIE----YEDEDDEVARFSF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4V8 GPN-loop GTPase 1

1.5e-19

70.21

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDE-DDDYSRLMIE----YEDEDDEVARFSF
        +AE+DKR+ EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDDKSKTKMV++++ EI+EEDE DDDY R   E     EDED+EVARFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDE-DDDYSRLMIE----YEDEDDEVARFSF

A0A6J1ENZ1 GPN-loop GTPase 1-like

1.5e-19

71.28

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF
        +AE+DKRI EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDDKSKTKMV+ E+EEI+EE+EDD DY+R   E     EDED+EV RFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF

A0A6J1FI60 GPN-loop GTPase 1-like

7.5e-19

59.82

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Query:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDDDYSRLMIEY----
        VD   ++I +     +   +AE+DKRI EKQ+L EER REN+EKLRKDMESS+GQ VVLST LKD+K+KTKMV +E+EEI +ED DDDY R   E     
Subjt:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDDDYSRLMIEY----

Query:  EDEDDEVARFSF
        ED+D+EVARFSF
Subjt:  EDEDDEVARFSF

A0A6J1HRW8 GPN-loop GTPase 1-like

9.7e-19

59.82

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Query:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDDDYSRLMIEY----
        VD   ++I +     +   +AE+DKRI EKQ+L EER REN+EKLRKDMESS+GQ VVLST LKD+KSKTKMV +E+EEI +ED DDDY R   E     
Subjt:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDDDYSRLMIEY----

Query:  EDEDDEVARFSF
        ED+D+EV RFSF
Subjt:  EDEDDEVARFSF

A0A6J1K9A8 GPN-loop GTPase 1-like

1.5e-19

71.28

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Query:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF
        +AE+DKRI EKQ+L EER REN+EKLR+DMESSKGQ VVLST LKDD+SKTKMV+ E+EEI+EE+EDD DY+R   E     EDED+EVARFSF
Subjt:  QAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDD-DYSRLMIE----YEDEDDEVARFSF

SwissProt top hits

e value

%identity

Alignment

Q8W586 GPN-loop GTPase QQT2

1.1e-08

40.37

Show/hide

Query:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEE---IEEEDEDDDYSRLMIEYE
        +DG  ++I A     +   +A++D R  +K++L EER +  +EKLRKDMESS+G  VVL+T LKD  +  KM+  E++E   +E+E++ DD     I+ +
Subjt:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEE---IEEEDEDDDYSRLMIEYE

Query:  DEDDEVARF
        DEDDE   +
Subjt:  DEDDEVARF

Arabidopsis top hits

e value

%identity

Alignment

AT4G21800.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

8.2e-10

40.37

Show/hide

Query:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEE---IEEEDEDDDYSRLMIEYE
        +DG  ++I A     +   +A++D R  +K++L EER +  +EKLRKDMESS+G  VVL+T LKD  +  KM+  E++E   +E+E++ DD     I+ +
Subjt:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEE---IEEEDEDDDYSRLMIEYE

Query:  DEDDEVARF
        DEDDE   +
Subjt:  DEDDEVARF

AT4G21800.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein

8.2e-10

40.37

Show/hide

Query:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEE---IEEEDEDDDYSRLMIEYE
        +DG  ++I A     +   +A++D R  +K++L EER +  +EKLRKDMESS+G  VVL+T LKD  +  KM+  E++E   +E+E++ DD     I+ +
Subjt:  VDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEE---IEEEDEDDDYSRLMIEYE

Query:  DEDDEVARF
        DEDDE   +
Subjt:  DEDDEVARF

Sequences

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CDS sequence

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ATGTTAAAAAACAATTTGTTGCATGCAGTGGATGGAAGACTTCGAAGCATTGCTGCAGTTCGGATAGTTCTTCTTACACCTCAACAGGCCGAGATTGACAAGAGGATTTT
CGAGAAGCAGCAGTTGGGAGAAGAGCGCGGACGGGAAAACGTGGAGAAGTTAAGGAAAGATATGGAGAGCTCGAAGGGACAACCTGTGGTTTTGAGCACCAGTTTGAAGG
ATGACAAGAGTAAAACTAAGATGGTCAATAGTGAAAATGAAGAGATAGAAGAGGAAGATGAGGACGATGATTACAGCAGATTGATGATTGAATATGAGGATGAAGATGAT
GAGGTTGCAAGATTCTCCTTTTAG

mRNA sequence

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Protein sequence

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MLKNNLLHAVDGRLRSIAAVRIVLLTPQQAEIDKRIFEKQQLGEERGRENVEKLRKDMESSKGQPVVLSTSLKDDKSKTKMVNSENEEIEEEDEDDDYSRLMIEYEDEDD
EVARFSF

Sed0005907 (gene) of Chayote v1 genome