CuGenDBv2

Gene ID	Sed0005916
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S3a
Genome location	LG04:33943237..33946289
RNA-Seq Expression	Sed0005916
Synteny	Sed0005916
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022930511.1 40S ribosomal protein S3a-like [Cucurbita moschata]

1.8e-136

97.32

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGK IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVV EEA EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

XP_022956208.1 40S ribosomal protein S3a-like [Cucurbita moschata]

5.9e-135

95.02

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV+RPADE   EEA EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

XP_022959011.1 40S ribosomal protein S3a-like [Cucurbita moschata]

2.6e-135

96.55

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVV E A EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

XP_023000239.1 40S ribosomal protein S3a-like [Cucurbita maxima]

2.8e-137

97.7

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVV EEA EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

XP_023006746.1 40S ribosomal protein S3a-like [Cucurbita maxima]

5.3e-136

96.93

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVV E A EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CAG4 40S ribosomal protein S3a

2.8e-135

96.55

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVV E A EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

A0A6J1ER42 40S ribosomal protein S3a

8.8e-137

97.32

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGK IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVV EEA EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

A0A6J1H3P8 40S ribosomal protein S3a

1.3e-135

96.55

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVV E A EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

A0A6J1KJB0 40S ribosomal protein S3a

1.4e-137

97.7

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVV EEA EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

A0A6J1KYM2 40S ribosomal protein S3a

2.6e-136

96.93

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVV E A EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

4.0e-126

87.36

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTD YTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V E   EV  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

P33444 40S ribosomal protein S3a

5.7e-125

87.4

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIM NQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVKE
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E V E
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVKE

P49397 40S ribosomal protein S3a

1.7e-124

88.8

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKG KKKTVDPFAKKDWYDIKAPSVFNV+N+GKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE+ AYRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD Y LR+FCIGFTKRRPNQVKRTCYAQ+SQIRQIRRKM EIMANQA+SCDLKELV KFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE
        TSSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY+ ED+G K+DRPA++
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE

Q285L8 40S ribosomal protein S3a

1.8e-126

86.59

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DP+AKKDWYDIKAPSVF++KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE V E   E+  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

Q8GTE3 40S ribosomal protein S3a

1.6e-127

88.51

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTD YTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE V E   E+  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

1.4e-123

83.97

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAPS+F  +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IM  +A+SCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEVVKEEAAEVTWA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE+  EE  E+  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEVVKEEAAEVTWA

AT4G34670.1 Ribosomal protein S3Ae

1.1e-123

84.73

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAP  F  +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIM  +A+SCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEVVKEEAAEVTWA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPADE + EE  E+  A
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEVVKEEAAEVTWA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGTCGGAAAGAACAAGAGGATTTCCAAAGGGAAGAAGGGAGGCAAGAAGAAGACTGTCGACCCATTTGCAAAGAAGGATTGGTATGACATCAAAGCACCTTCCGT
GTTCAATGTCAAGAACGTCGGGAAGACTCTCGTTACTCGCACGCAGGGTACCAAGATTGCTTCCGAGGGGCTCAAACATAGAGTGTTTGAGGTATCACTGGCTGACCTTC
AGGATGACGAGGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAATGTTCTGACTAATTTCTGGGGAATGAATTTCACCACTGATAAATTG
AGGTCATTGGTAAGGAAATGGCATACATTGATTGAAGCTCATGTGGATGTTAAGACGACTGACGCTTACACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCC
TAATCAGGTCAAGAGGACCTGCTATGCACAATCCAGTCAGATTAGACAGATTCGCCGGAAGATGAGGGAGATCATGGCCAACCAGGCAACTTCATGTGACCTGAAAGAGT
TGGTCCGTAAGTTTATTCCTGAATCAATTGGAAAGGAAATCGAGAAGGCAACATCCAGCATTTACCCTCTGCAAAATGTTTTCATTCGGAAGGTCAAGATCTTGAAAGCT
CCCAAGTTCGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCTGATGAAGTTGTTAAGGAGGAGGCCGCTGA
AGTTACATGGGCTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAACACGAAAAAAGACCGAGCAGCGGACCTATATAAAGAGACCAAATTAGGGTTTTTGGGACGGCCGTTCTTTCTCGCTGGTTCTTCATCCTCTGAAGCTGCTGCTC
AACAACGCTTCTCAACTGCTCCAACCATGGCGGTCGGAAAGAACAAGAGGATTTCCAAAGGGAAGAAGGGAGGCAAGAAGAAGACTGTCGACCCATTTGCAAAGAAGGAT
TGGTATGACATCAAAGCACCTTCCGTGTTCAATGTCAAGAACGTCGGGAAGACTCTCGTTACTCGCACGCAGGGTACCAAGATTGCTTCCGAGGGGCTCAAACATAGAGT
GTTTGAGGTATCACTGGCTGACCTTCAGGATGACGAGGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAATGTTCTGACTAATTTCTGGG
GAATGAATTTCACCACTGATAAATTGAGGTCATTGGTAAGGAAATGGCATACATTGATTGAAGCTCATGTGGATGTTAAGACGACTGACGCTTACACTCTGAGGATGTTC
TGCATTGGATTTACCAAGAGACGCCCTAATCAGGTCAAGAGGACCTGCTATGCACAATCCAGTCAGATTAGACAGATTCGCCGGAAGATGAGGGAGATCATGGCCAACCA
GGCAACTTCATGTGACCTGAAAGAGTTGGTCCGTAAGTTTATTCCTGAATCAATTGGAAAGGAAATCGAGAAGGCAACATCCAGCATTTACCCTCTGCAAAATGTTTTCA
TTCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTCGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCTGAT
GAAGTTGTTAAGGAGGAGGCCGCTGAAGTTACATGGGCTTGAAAATGGTTTACTTGAATCAACTTTCTTAAATTAAGTACTGTCTTTTTTATTTATTTTTTATTGCCCCT
TTGTTTAGTTATAGTTGTACTATGTTTTGCCAAGTTGAGAAATCAGAGATCATCAACGATTTTGACTATGAAAAATAGTTGCTGCTTATTACTCCTTATGAACCATTTGA
ATATTCTCGGATGGTGCCGTTTGTTCGCTTTACCAATTGACATCATATTGAATTTCTGTATTTGAAAGCCAACTTCTGGCACGGTATCAATCAGTTTTCTCTAGTGAAGT
GATACTTATAATTCATACTTCATTTAAAGCGCTAT

Protein sequence

Show/hide protein sequence

MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDAYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVDRPADEVVKEEAAEVTWA

Sed0005916 (gene) of Chayote v1 genome