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Sed0005922 (gene) of Chayote v1 genome

Gene IDSed0005922
OrganismSechium edule (Chayote v1)
Descriptionconserved peptide upstream open reading frame 35
Genome locationLG14:23813810..23816091
RNA-Seq ExpressionSed0005922
SyntenySed0005922
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647743.1 hypothetical protein Csa_002958 [Cucumis sativus]2.0e-1387.5Show/hide
Query:  MYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        MY+G+TGKR R V+E+GKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
Subjt:  MYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
KAG6642198.1 hypothetical protein CIPAW_09G126700 [Carya illinoinensis]6.3e-1283.33Show/hide
Query:  MYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        MY+GVT KRYR VKEVG++ MSVGIIAYYQ++QVCQAEYFRQLLKPVT
Subjt:  MYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
PPR97774.1 hypothetical protein GOBAR_AA22895 [Gossypium barbadense]6.3e-1278Show/hide
Query:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        VRMY+ VT KRYR +KEVGK+ MSVG+IAYY+++QVCQAEYFRQLLKPVT
Subjt:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
PQQ06331.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 2 [Prunus yedoensis var. nudiflora]1.2e-1875.34Show/hide
Query:  TSSLENYSSKCVRLVVFFQ----VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        TSS  NYS  CVRLVVFF+    VRM +GVT KRYR +KEVGK+ MSVG+IAYYQ+MQVCQAEYFRQLLKPVT
Subjt:  TSSLENYSSKCVRLVVFFQ----VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
XP_020417230.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 2 [Prunus persica]2.2e-1264.29Show/hide
Query:  MTSSLENYSSKCVRLVVFFQVRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        M  S +  +  C  +V    VRM +GVT KRYR +KEVGK+ MSVG+IAYYQ+MQVCQAEYFRQLLKPVT
Subjt:  MTSSLENYSSKCVRLVVFFQVRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
TrEMBL top hitse value%identityAlignment
A0A2P5X359 Uncharacterized protein3.1e-1278Show/hide
Query:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        VRMY+ VT KRYR +KEVGK+ MSVG+IAYY+++QVCQAEYFRQLLKPVT
Subjt:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
A0A314YMT4 PLASMODESMATA CALLOSE-BINDING PROTEIN 25.7e-1975.34Show/hide
Query:  TSSLENYSSKCVRLVVFFQ----VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        TSS  NYS  CVRLVVFF+    VRM +GVT KRYR +KEVGK+ MSVG+IAYYQ+MQVCQAEYFRQLLKPVT
Subjt:  TSSLENYSSKCVRLVVFFQ----VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
A0A5B6U445 Transcription factor bHLH1443.1e-1278Show/hide
Query:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        VRMY+ VT KRYR +KEVGK+ MSVG+IAYY+++QVCQAEYFRQLLKPVT
Subjt:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
A0A7J6ENW5 Uncharacterized protein3.1e-1278Show/hide
Query:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        VRM++ ++ KRYR VKEVGK+ MSVG+IAYYQ+MQVCQAEYFRQLLKPVT
Subjt:  VRMYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
F6HMI1 Uncharacterized protein6.8e-1283.33Show/hide
Query:  MYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        MY+ VT KRYR VKEVGK+ MSVGIIA+YQ+MQVCQAEYFRQLLKPVT
Subjt:  MYVGVTGKRYR-VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29951.1 conserved peptide upstream open reading frame 358.5e-0766.67Show/hide
Query:  VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        +KE+G   M+   IA YQ +QVCQAEYFRQLLKPVT
Subjt:  VKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
AT5G50011.1 conserved peptide upstream open reading frame 371.0e-0468.97Show/hide
Query:  NMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        N+ V +IA +Q +Q CQAEYFRQLLKPVT
Subjt:  NMSVGIIAYYQVMQVCQAEYFRQLLKPVT
AT5G64341.1 conserved peptide upstream open reading frame 406.7e-0448.78Show/hide
Query:  GKRYRVKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT
        G +Y      +  + V +I  YQ M  CQAEYFR LLKPVT
Subjt:  GKRYRVKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCCTCCTTAGAAAACTACAGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCAAGTGAGAATGTACGTTGGTGTAACGGGGAAGAGATACAGAGTCAAGGAAGT
TGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGGCTGAATATTTTCGCCAATTGTTAAAACCTGTCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATCCTCCTTAGAAAACTACAGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCAAGTGAGAATGTACGTTGGTGTAACGGGGAAGAGATACAGAGTCAAGGAAGT
TGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGGCTGAATATTTTCGCCAATTGTTAAAACCTGTCACGTAG
Protein sequenceShow/hide protein sequence
MTSSLENYSSKCVRLVVFFQVRMYVGVTGKRYRVKEVGKVNMSVGIIAYYQVMQVCQAEYFRQLLKPVT