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Sed0005960 (gene) of Chayote v1 genome

Gene IDSed0005960
OrganismSechium edule (Chayote v1)
Descriptiondormancy-associated protein homolog 3-like isoform X2
Genome locationLG04:3503012..3504155
RNA-Seq ExpressionSed0005960
SyntenySed0005960
Gene Ontology termsNA
InterPro domainsIPR008406 - Dormancy/auxin associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022316.1 Dormancy-associated protein-like 3 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1865.91Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

XP_022925438.1 dormancy-associated protein homolog 3-like isoform X1 [Cucurbita moschata]2.6e-1865.91Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

XP_022925449.1 dormancy-associated protein homolog 3-like isoform X2 [Cucurbita moschata]2.6e-1865.91Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

XP_038878371.1 dormancy-associated protein homolog 3-like isoform X1 [Benincasa hispida]2.0e-1864.37Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPA----AFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP     + + KESN KSYEEGT     S E  VRVSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPA----AFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

XP_038878372.1 dormancy-associated protein homolog 3-like isoform X2 [Benincasa hispida]2.0e-1864.37Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPA----AFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP     + + KESN KSYEEGT     S E  VRVSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPA----AFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

TrEMBL top hitse value%identityAlignment
A0A0A0LWE4 Uncharacterized protein9.1e-1759.55Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHP-----AAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPT-GYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP     +A   + SN K YEEG   S  S E +V+VSRRIM VKP  GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHP-----AAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPT-GYQYGCLLLFPVVST

A0A6J1EC77 dormancy-associated protein homolog 3-like isoform X21.3e-1865.91Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

A0A6J1EF66 dormancy-associated protein homolog 3-like isoform X11.3e-1865.91Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG   + P  S+
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

A0A6J1HZS2 dormancy-associated protein homolog 3-like isoform X21.7e-1871.79Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYG
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYG

A0A6J1I2Y2 dormancy-associated protein homolog 3-like isoform X11.7e-1871.79Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYG
        +GLLDQLWDDTLAGP PDSGLGKL KHP +FTS     KESN KSYEEGT   P S E  ++VSRRIM VKP GYQYG
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTS-----KESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYG

SwissProt top hitse value%identityAlignment
F4HV65 Dormancy-associated protein homolog 43.4e-0542.42Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVK
        +G L +LWD+T+AGP PD+GLGKL KH +  T +             SPPS  +  +V+R IM  K
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVK

Q8LD26 Dormancy-associated protein homolog 31.4e-1146.51Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLD LWDDT+AGP P++GLGKL KH        S N   E G+A S   +   E  V+V+R IM +KP GYQ       P  ST
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

Arabidopsis top hitse value%identityAlignment
AT1G54070.1 Dormancy/auxin associated family protein2.4e-0642.42Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVK
        +G L +LWD+T+AGP PD+GLGKL KH +  T +             SPPS  +  +V+R IM  K
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVK

AT1G56220.1 Dormancy/auxin associated family protein1.0e-1246.51Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLD LWDDT+AGP P++GLGKL KH        S N   E G+A S   +   E  V+V+R IM +KP GYQ       P  ST
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

AT1G56220.2 Dormancy/auxin associated family protein1.0e-1246.51Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLD LWDDT+AGP P++GLGKL KH        S N   E G+A S   +   E  V+V+R IM +KP GYQ       P  ST
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

AT1G56220.3 Dormancy/auxin associated family protein1.0e-1246.51Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLD LWDDT+AGP P++GLGKL KH        S N   E G+A S   +   E  V+V+R IM +KP GYQ       P  ST
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST

AT1G56220.4 Dormancy/auxin associated family protein1.0e-1246.51Show/hide
Query:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST
        +GLLD LWDDT+AGP P++GLGKL KH        S N   E G+A S   +   E  V+V+R IM +KP GYQ       P  ST
Subjt:  LGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSE---ETTVRVSRRIMTVKPTGYQYGCLLLFPVVST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGTTGTTTGGCGCTGGGGCTACTCGACCAGCTTTGGGACGACACGCTTGCCGGACCGGCACCCGACTCCGGTCTCGGCAAGCTCCTCAAGCATCCTGCGGCCTT
CACTTCCAAGGAGTCGAACAATAAGAGTTACGAGGAAGGAACAGCGGAATCGCCGCCGTCGGAGGAGACGACGGTAAGAGTTTCGAGAAGGATTATGACGGTAAAGCCAA
CGGGATACCAGTATGGCTGCCTTCTCCTTTTTCCGGTAGTTTCCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGTTGTTTGGCGCTGGGGCTACTCGACCAGCTTTGGGACGACACGCTTGCCGGACCGGCACCCGACTCCGGTCTCGGCAAGCTCCTCAAGCATCCTGCGGCCTT
CACTTCCAAGGAGTCGAACAATAAGAGTTACGAGGAAGGAACAGCGGAATCGCCGCCGTCGGAGGAGACGACGGTAAGAGTTTCGAGAAGGATTATGACGGTAAAGCCAA
CGGGATACCAGTATGGCTGCCTTCTCCTTTTTCCGGTAGTTTCCACGTGA
Protein sequenceShow/hide protein sequence
MGGCLALGLLDQLWDDTLAGPAPDSGLGKLLKHPAAFTSKESNNKSYEEGTAESPPSEETTVRVSRRIMTVKPTGYQYGCLLLFPVVST