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Sed0005967 (gene) of Chayote v1 genome

Gene IDSed0005967
OrganismSechium edule (Chayote v1)
DescriptionH15 domain-containing protein
Genome locationLG05:39179682..39180474
RNA-Seq ExpressionSed0005967
SyntenySed0005967
Gene Ontology termsGO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606947.1 hypothetical protein SDJN03_00289, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5174.66Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLA++  GST+N+RRRFWR+KISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+ HRP A AGS
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

KAG7036650.1 hypothetical protein SDJN02_00270, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-5174.66Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLA++  GST+N+RRRFWR+KISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+ HRP A AGS
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

XP_022949029.1 uncharacterized protein LOC111452494 [Cucurbita moschata]1.7e-5175.34Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLA++ LGST+N+RRRFWR+KISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+ HRP A AGS
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

XP_022997941.1 uncharacterized protein LOC111492739 [Cucurbita maxima]2.5e-5074.66Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLAQ+  GST+N+RRRFWRIKISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+ H P   AGS
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

XP_023525311.1 uncharacterized protein LOC111788948 [Cucurbita pepo subsp. pepo]3.8e-5175.86Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLAQ+  GST+N+RRRFWR KISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAG
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+VHRP A AG
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAG

TrEMBL top hitse value%identityAlignment
A0A0A0KTE2 Uncharacterized protein3.5e-5072.3Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFS---GV
        MDEDGVS KW++ L+RYW++  Y+KLN S+ RRRRRLAQVELGSTRN+RRRFWRIKISPK +F RK PSPKK L+RLRDAYV+MMLGFANSRVF+   G 
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFS---GV

Query:  GGAVCGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        G AVC G+ GFGQ  AKEYDEKMILEIYKS+VA QR+++HRP AA  +
Subjt:  GGAVCGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

A0A1S3BZ24 uncharacterized protein LOC1034947421.7e-4973.65Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFS---GV
        MDEDG S KW++ L  YW++  YEKLN S+ RRRRRLAQVELGSTRN+RRRFWRIKISPK +F RK PSPKK L+RLRDAYV+MMLGFANSRVF+   G 
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFS---GV

Query:  GGAVCGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        G AVC G+ GFGQ PAKEYDEKMILEIYKS+VA QR++ HRP A AGS
Subjt:  GGAVCGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

A0A5D3BW14 Putative carrier protein1.7e-4973.65Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFS---GV
        MDEDG S KW++ L  YW++  YEKLN S+ RRRRRLAQVELGSTRN+RRRFWRIKISPK +F RK PSPKK L+RLRDAYV+MMLGFANSRVF+   G 
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFS---GV

Query:  GGAVCGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        G AVC G+ GFGQ PAKEYDEKMILEIYKS+VA QR++ HRP A AGS
Subjt:  GGAVCGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

A0A6J1GBM5 uncharacterized protein LOC1114524948.3e-5275.34Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLA++ LGST+N+RRRFWR+KISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+ HRP A AGS
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

A0A6J1K8W9 uncharacterized protein LOC1114927391.2e-5074.66Show/hide
Query:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA
        MDE+GVS KWF+ ++ YW+K TY+KLN S+ RRRRRLAQ+  GST+N+RRRFWRIKISPKL+F RKFPSPKK LIRLRDAYV+MMLG ANSRVFSG G A
Subjt:  MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGA

Query:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS
        V C G+AGFG+ PAKEYDEK+ILEIYKSMVAAQRQ+ H P   AGS
Subjt:  V-CGGVAGFGQGPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47485.1 unknown protein7.5e-2151.56Show/hide
Query:  RYWEKTT-YEKLNTSTRRR---RRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQG
        RYW +   Y++L+ S ++    RR + +V++  TR  +RRFWRIKI PKL+  +K  SPKK L  LRDAYV+MML  ANSRV   VG +   G  G+G G
Subjt:  RYWEKTT-YEKLNTSTRRR---RRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQG

Query:  PA-KEYDEKMILEIYKSMVAAQRQLVHR
         A KEYDEK ++EIYKS++ AQ  LVHR
Subjt:  PA-KEYDEKMILEIYKSMVAAQRQLVHR

AT3G62650.1 unknown protein6.1e-2355.73Show/hide
Query:  KRYWEK-TTYEKLNTS--TRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQG
        KRYW +   YEKL+ S  T   RR+  +V++  TR  ++RFWRIKI PKL+   K  SPKKFL+ LRD+YV MM+  ANSRV   VG +  GG +GFG G
Subjt:  KRYWEK-TTYEKLNTS--TRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQG

Query:  PAKEYDEKMILEIYKS--MVAAQRQLVHRPT
          KEYDEKM++EIYKS  MV AQ  LVHR T
Subjt:  PAKEYDEKMILEIYKS--MVAAQRQLVHRPT

AT3G62650.2 unknown protein6.1e-2355.73Show/hide
Query:  KRYWEK-TTYEKLNTS--TRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQG
        KRYW +   YEKL+ S  T   RR+  +V++  TR  ++RFWRIKI PKL+   K  SPKKFL+ LRD+YV MM+  ANSRV   VG +  GG +GFG G
Subjt:  KRYWEK-TTYEKLNTS--TRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQG

Query:  PAKEYDEKMILEIYKS--MVAAQRQLVHRPT
          KEYDEKM++EIYKS  MV AQ  LVHR T
Subjt:  PAKEYDEKMILEIYKS--MVAAQRQLVHRPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGACGGAGTTTCAAACAAATGGTTCCGACGGCTAAAACGCTACTGGGAAAAAACAACCTACGAGAAGCTTAACACCTCGACGCGACGGCGGAGGCGGCGGCT
CGCCCAGGTGGAGCTCGGGTCGACCCGGAACTCACGGCGGCGCTTCTGGCGGATCAAGATCTCACCCAAACTCAAATTCTTTCGAAAATTCCCGTCGCCCAAGAAATTTC
TCATCCGCCTCCGTGATGCCTACGTCGACATGATGCTCGGCTTCGCTAATTCCCGGGTTTTCTCCGGCGTCGGCGGCGCCGTGTGCGGCGGAGTTGCCGGCTTCGGACAG
GGACCGGCGAAGGAGTACGACGAGAAGATGATCCTTGAGATCTACAAGTCTATGGTGGCGGCGCAGCGGCAGTTGGTCCACCGCCCCACCGCCGCTGCCGGATCGTAG
mRNA sequenceShow/hide mRNA sequence
CCCAAATTCATAATTCTAAAGAGAGAGAAAAAAGAAAAAGAAAAATGGACGAAGACGGAGTTTCAAACAAATGGTTCCGACGGCTAAAACGCTACTGGGAAAAAACAACC
TACGAGAAGCTTAACACCTCGACGCGACGGCGGAGGCGGCGGCTCGCCCAGGTGGAGCTCGGGTCGACCCGGAACTCACGGCGGCGCTTCTGGCGGATCAAGATCTCACC
CAAACTCAAATTCTTTCGAAAATTCCCGTCGCCCAAGAAATTTCTCATCCGCCTCCGTGATGCCTACGTCGACATGATGCTCGGCTTCGCTAATTCCCGGGTTTTCTCCG
GCGTCGGCGGCGCCGTGTGCGGCGGAGTTGCCGGCTTCGGACAGGGACCGGCGAAGGAGTACGACGAGAAGATGATCCTTGAGATCTACAAGTCTATGGTGGCGGCGCAG
CGGCAGTTGGTCCACCGCCCCACCGCCGCTGCCGGATCGTAGCTGAATTAAAGTCACTCCGACCAGGTGAAATATAGATATTTTAATTTTGGATATTTCTTGGTTTTTTT
ACAAAAATTTTAATCTTTGTTGTTTTATGTTTTTTTTAAAAAAATCATATCATTGTCGTGGATGAATGTTAAAATTATACGAATAGACATAAATTGGATTGTAAATAGAG
AGAATTTGAAATTTCTGTCAGAAAATAAAATCATTCGGCAACGAAAATGATATAATTTAAAACGTTGGATGTGATTAAAGAGGCTGAATTACGAAACTGTCAAGATTAAA
ACAAATTTGGTTGCAAAAATAAT
Protein sequenceShow/hide protein sequence
MDEDGVSNKWFRRLKRYWEKTTYEKLNTSTRRRRRRLAQVELGSTRNSRRRFWRIKISPKLKFFRKFPSPKKFLIRLRDAYVDMMLGFANSRVFSGVGGAVCGGVAGFGQ
GPAKEYDEKMILEIYKSMVAAQRQLVHRPTAAAGS