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Sed0005979 (gene) of Chayote v1 genome

Gene IDSed0005979
OrganismSechium edule (Chayote v1)
DescriptionProtein ALP1-like protein
Genome locationLG11:19890600..19893995
RNA-Seq ExpressionSed0005979
SyntenySed0005979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433792.1 hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]2.8e-4346.63Show/hide
Query:  MDELDGETYAKVLKLLHGNVTW------RKIFLDIPDAR-----------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCE
        MDE+DG++Y+K +KLLH +V          +F D  D                         +  L+  HDYV+ELLNG+++RC+DCFRM K  F+ FCE
Subjt:  MDELDGETYAKVLKLLHGNVTW------RKIFLDIPDAR-----------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCE

Query:  DLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSK
        +LK+KTNLK SR+++VQE+V                     FLL I HNERNR+VAERFQHSG+TISR FN VLK+VC LGVE+IC  N D +  EIR  
Subjt:  DLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSK

Query:  SKYFPFFK
         KY+PFFK
Subjt:  SKYFPFFK

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]1.2e-4142.54Show/hide
Query:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDAR-------------------------------------------------KRDLIYSHDYVIELLNGN
        MD+LD ++Y KVL+ LHG+V WR++F+D+P+ R                                                 +  ++  HDYV+E+LNG+
Subjt:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDAR-------------------------------------------------KRDLIYSHDYVIELLNGN

Query:  DTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKL
        + RC   FRMK   F+AFCE LK   NLK SRYL++QE+VC                    FLL I HNERNR+V ERFQHSG TIS  F+ VLK VCKL
Subjt:  DTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKL

Query:  GVEIICPPNGDNIPQEIRSKSKYFPFFK
        GV II PP+ D+IP +IR  +KYFPFFK
Subjt:  GVEIICPPNGDNIPQEIRSKSKYFPFFK

KAF7148819.1 hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]1.5e-4141.92Show/hide
Query:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDAR--------------------------------------------------KRDLIYSHDYVIELLNG
        MD+LD ++Y KVL+ LHG++ WR++F+D+P+ R                                                  +  ++  HDYV+E+LNG
Subjt:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDAR--------------------------------------------------KRDLIYSHDYVIELLNG

Query:  NDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCK
        ++ RC   FRMK   F+AFCE LK   NLK SRYL++QE+VC                    FLL I HNERNR+V ERFQHSG TIS  F+ VLK VCK
Subjt:  NDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCK

Query:  LGVEIICPPNGDNIPQEIRSKSKYFPFFK
        LGV II PP+ D+IP +IR  +KYFPFFK
Subjt:  LGVEIICPPNGDNIPQEIRSKSKYFPFFK

XP_028094390.1 uncharacterized protein LOC114294454 [Camellia sinensis]1.9e-3147.33Show/hide
Query:  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAER
        P   +  ++  HDYV+E+LNG++ R  + FRM+   F+  CE LK    L+ SRYL+VQE+VC                    FLL I HNERNR+V ER
Subjt:  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAER

Query:  FQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK
        FQHSGQTIS+ FN VLK VC+LG ++I PP+ D +P EIR   +++PFFK
Subjt:  FQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK

XP_028100667.1 uncharacterized protein LOC114300013 [Camellia sinensis]3.2e-3147.33Show/hide
Query:  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAER
        P   +  ++  HDYV+E+LNG++ R  + FRM+   F+  CE LK    L+ SRYL+VQE+VC                    FLL I HNERNR+V ER
Subjt:  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAER

Query:  FQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK
        FQHSGQTIS+ FN VLK VC+LG ++I PP+ D +P EIR   +++PFFK
Subjt:  FQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ7 Uncharacterized protein9.1e-4053.37Show/hide
Query:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNL-KASRYLSVQEKVC-----NS
        MD++DGE Y K+LKL HG                      HDYVIELLNGND+RCFDCFR ++VTFV FCEDLK+KTNL KASRYL+VQEKV       +
Subjt:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNL-KASRYLSVQEKVC-----NS

Query:  PGFHPGPHSGRVF------------TKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPN
          +        +F             K+  FLL+ISHNE NRIV ERFQHSG TIS  FN VL++VCKLG+EII PPN
Subjt:  PGFHPGPHSGRVF------------TKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPN

A0A1S3E695 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like1.3e-2242.75Show/hide
Query:  DYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVF
        ++V E+LNG++T CFD FRMKK  F+ FC +L+ K  L  SR + V+EKV                     FL +I HN R+R+ + RFQHS +TISR F
Subjt:  DYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVF

Query:  NIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK
          VL+ VC+LG E+I       +P+ I++ SKY+P+FK
Subjt:  NIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK

A0A2N9GND4 Uncharacterized protein3.5e-2341.22Show/hide
Query:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQH
        +++D    H+Y++E+LNG D+ C++ FRM+K  F++ C+ LK+   L+ SR++SVQEKV                     F+L I H+ RNR++ +RFQH
Subjt:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQH

Query:  SGQTISRVFNIVLKRVCKLGVEIICPPNG-DNIPQEIRSKSKYFPFFK
        SG+TISR FN VL  + KL  ++I P      IP  IR K KY+P+FK
Subjt:  SGQTISRVFNIVLKRVCKLGVEIICPPNG-DNIPQEIRSKSKYFPFFK

A0A3Q7Y331 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like1.3e-2242.75Show/hide
Query:  DYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVF
        ++V E+LNG++T CFD FRMKK  F+ FC +L+ K  L  SR + V+EKV                     FL +I HN R+R+ + RFQHS +TISR F
Subjt:  DYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVF

Query:  NIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK
          VL+ VC+LG E+I       +P+ I++ SKY+P+FK
Subjt:  NIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFK

A0A6A4KNZ4 Myb_DNA-bind_3 domain-containing protein (Fragment)1.4e-2743.75Show/hide
Query:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDL---------------IYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYL
        M++L  ++Y  VL+ LHG+V WR++FLD+P+ ++  L                  HDYV+E+LNG++ RC   FRMK   F+AFCE LK   NLK SRYL
Subjt:  MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDL---------------IYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYL

Query:  SVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVL
        ++QE+VC                    FLL I HNER+R+V E FQHSG TIS  F IV+
Subjt:  SVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G28730.1 unknown protein2.8e-0929.23Show/hide
Query:  NDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCK
        N+  C    RM    F   CE L  K  L++S  +S+ E V                     FL++ + N+  R +A RF H+ +TI R F+ VLK + +
Subjt:  NDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCK

Query:  LGVEIICPPNGDN---IPQEIRSKSKYFPF
        L VE I P   +    I   ++  ++Y+PF
Subjt:  LGVEIICPPNGDN---IPQEIRSKSKYFPF

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.0e-1130.95Show/hide
Query:  YVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFN
        +V ++LNG + +CF+ FRM K  F   C+ L+ +  L+ +  + ++                    +L  FL +I HN R R V E F +SG+TISR FN
Subjt:  YVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFN

Query:  IVLKRVCKLGVEIICP-PNGDNIPQE
         VL  V  +  +   P  N D +  +
Subjt:  IVLKRVCKLGVEIICP-PNGDNIPQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAAATGTTACTTGGAGAAAGATATTTTTGGACATACCCGATGCAAGGAAGAGAGATTT
GATTTATAGTCATGATTATGTGATTGAGTTATTAAATGGGAATGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGTTACATTCGTAGCTTTTTGTGAGGATTTAA
AGGCGAAGACGAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTTGTAACAGCCCAGGTTTTCATCCCGGACCCCATTCGGGTCGGGTCTTTACAAAGTTG
CCATTTTTTTTATTAGTCATATCACATAATGAGAGAAATCGTATAGTAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAG
AGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCAAATGGAGATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTTAAAGTAATATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAAATGTTACTTGGAGAAAGATATTTTTGGACATACCCGATGCAAGGAAGAGAGATTT
GATTTATAGTCATGATTATGTGATTGAGTTATTAAATGGGAATGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGTTACATTCGTAGCTTTTTGTGAGGATTTAA
AGGCGAAGACGAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTTGTAACAGCCCAGGTTTTCATCCCGGACCCCATTCGGGTCGGGTCTTTACAAAGTTG
CCATTTTTTTTATTAGTCATATCACATAATGAGAGAAATCGTATAGTAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAG
AGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCAAATGGAGATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTTAAAGTAATATCTTAA
Protein sequenceShow/hide protein sequence
MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKL
PFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFKVIS