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Sed0005982 (gene) of Chayote v1 genome

Gene IDSed0005982
OrganismSechium edule (Chayote v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG09:10505657..10506079
RNA-Seq ExpressionSed0005982
SyntenySed0005982
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593852.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3156.96Show/hide
Query:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL
        MD +KLG +S+SSSEEQSDR + ED S+SF  + SYGC+FCK GFTNAQALGGHMNIHRKDRANK+K++  F  +P SKQ++ STF+    FEPLL  S 
Subjt:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL

Query:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP
        V+Y  S S P G       LNM+ WG DL L+  PSK         G+DLELRLG+ P
Subjt:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]1.2e-3056.33Show/hide
Query:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL
        MD +KLG +S+SSS EQSDR + ED S+SF  + SYGC+FCK GFTNAQALGGHMNIHRKDRANK+K++  F  +P SKQ++ STF+    FEPLL  S 
Subjt:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL

Query:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP
        V+Y  S S P G       LNM+ WG DL L+  PSK         G+DLELRLG+ P
Subjt:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP

XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]3.8e-3258.23Show/hide
Query:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL
        MD +KL  +S+SSSEEQSDR + ED S+SF  + SYGC+FCK GFTNAQALGGHMNIHRKDRANK+K++  F  +P SKQ + STF+    FEPLL  S 
Subjt:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL

Query:  VNYEESTSKP------HGLLNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP
        V+YE S S P      HG LNM+LWG DL L+  PSK         G+DLELRLG+ P
Subjt:  VNYEESTSKP------HGLLNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]5.0e-3257.59Show/hide
Query:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL
        MD +KLG +S+SSSEEQSDR + ED S+SF  + SYGC+FCK GFTNAQALGGHMNIHRKDRANK+K++  F  +P SKQ++ STF+    FEPLL  S 
Subjt:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL

Query:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP
        V+Y  S S P G       LNM+LWG DL L+  PSK         G+DLELRLG+ P
Subjt:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]5.0e-2450Show/hide
Query:  KKLGIN-SDSSSE-EQSDRSSREDKSNSFAN---RSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQV-----DQSTFIYFEPLL
        +KLG + S+SSSE EQS+    +D S+SF N   + SY C+FCK GFTNAQALGGHMNIHRKDR NK  K+   SS   S Q+     + ++  YF PLL
Subjt:  KKLGIN-SDSSSE-EQSDRSSREDKSNSFAN---RSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQV-----DQSTFIYFEPLL

Query:  FSSLVNYEESTSKPHGL------LNMDLWGLDLCLKNGPS---------KGVDLELRLGYDP
          S VNY+ S+S  HG        NM+LWG DL L+ GP+          GVDLELRLG+ P
Subjt:  FSSLVNYEESTSKPHGL------LNMDLWGLDLCLKNGPS---------KGVDLELRLGYDP

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein6.2e-2044.44Show/hide
Query:  INSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTY-FSSIPISKQVDQSTFI----------YFEPLLFSS
        + + +  +   D  +  D  N    + SY C+FCK GFTNAQALGGHMNIHRKDR NK  K ++ FSS   S  +  +  I          YF PLL  S
Subjt:  INSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTY-FSSIPISKQVDQSTFI----------YFEPLLFSS

Query:  LVNYEESTSKPHG-LLNMDLWGLDLCLKNGPSK----------GVDLELRLGY
         VNY+ STS  HG   NM+LWG DL L+ G +           GVDLELRLG+
Subjt:  LVNYEESTSKPHG-LLNMDLWGLDLCLKNGPSK----------GVDLELRLGY

A0A6A6LQU5 C2H2-type domain-containing protein4.3e-1342.76Show/hide
Query:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIP-ISKQVDQSTFIYFE--PLLFSSLVNYEESTS
        +  S SEE++DRS  E  ++      SY C+FCK GFT AQALGGHMNIHRKDRA         SS+P IS +VD    + F   P + S   +Y  +  
Subjt:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIP-ISKQVDQSTFIYFE--PLLFSSLVNYEESTS

Query:  KPHGLLN--MDLWGLDLCLKNGPS-----KG----------VDLELRLGYDP
          H LLN   + W  +L L+ GPS     KG          +DLELRLG+DP
Subjt:  KPHGLLN--MDLWGLDLCLKNGPS-----KG----------VDLELRLGYDP

A0A6J1CE07 transcriptional regulator TAC1-like4.6e-2347.9Show/hide
Query:  KKLGINSDSSSEEQ-SDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSS-------IPISKQVDQSTFIYFEPLLFS
        K LG +SDSSSEEQ S+   + D      N+ SYGC+FCK GFTNAQALGGHMNIHRKDRANK K++T  SS       +P SKQ++ S F+    L F 
Subjt:  KKLGINSDSSSEEQ-SDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSS-------IPISKQVDQSTFIYFEPLLFS

Query:  -SLVNYEESTSKPHGLL--------NMDLWGLDLCLKNGPSK--------------GVDLELRLGYD
           V++EES S P G            +LWG DL L+  PSK              G+DLELRLG+D
Subjt:  -SLVNYEESTSKPHGLL--------NMDLWGLDLCLKNGPSK--------------GVDLELRLGYD

A0A6J1EX07 probable transcriptional regulator RABBIT EARS6.0e-3156.33Show/hide
Query:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL
        MD +KLG +S+SSS EQSDR + ED S+SF  + SYGC+FCK GFTNAQALGGHMNIHRKDRANK+K++  F  +P SKQ++ STF+    FEPLL  S 
Subjt:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL

Query:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP
        V+Y  S S P G       LNM+ WG DL L+  PSK         G+DLELRLG+ P
Subjt:  VNYEESTSKPHGL------LNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP

A0A6J1KKB3 zinc finger protein GIS-like1.9e-3258.23Show/hide
Query:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL
        MD +KL  +S+SSSEEQSDR + ED S+SF  + SYGC+FCK GFTNAQALGGHMNIHRKDRANK+K++  F  +P SKQ + STF+    FEPLL  S 
Subjt:  MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI---YFEPLLFSSL

Query:  VNYEESTSKP------HGLLNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP
        V+YE S S P      HG LNM+LWG DL L+  PSK         G+DLELRLG+ P
Subjt:  VNYEESTSKP------HGLLNMDLWGLDLCLKNGPSK---------GVDLELRLGYDP

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.6e-0449.09Show/hide
Query:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRA
        N +SS EE +   + +D + S     SY C FC+  F +AQALGGHMN+HR+DRA
Subjt:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRA

Q38895 Transcriptional regulator SUPERMAN2.4e-0546.3Show/hide
Query:  SYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFIY
        SY C FCK  F +AQALGGHMN+HR+DRA    + +  SS   S       + Y
Subjt:  SYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFIY

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.4e-0541.77Show/hide
Query:  SYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQST----FIYFEPLLFSSLVNYEESTSKPHG
        SY C FC   F +AQALGGHMN+HR+DRA   ++    SS       DQ+T        + L   S V  +E T KP+G
Subjt:  SYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQST----FIYFEPLLFSSLVNYEESTSKPHG

Q9SR34 Transcriptional regulator TAC12.9e-0640.51Show/hide
Query:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI
        N+D  S+  S ++S +   +S     SY C FC  GF+NAQALGGHMNIHR+DRA   +K+   +   +  + D S  +
Subjt:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator12.0e-0740.51Show/hide
Query:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI
        N+D  S+  S ++S +   +S     SY C FC  GF+NAQALGGHMNIHR+DRA   +K+   +   +  + D S  +
Subjt:  NSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFI

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.7e-0646.3Show/hide
Query:  SYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFIY
        SY C FCK  F +AQALGGHMN+HR+DRA    + +  SS   S       + Y
Subjt:  SYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFIY

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.8e-0839.53Show/hide
Query:  SNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDR----ANKSKKMTYFSSIPI-SKQVDQSTFIYFEPLLFSSLVNYEESTSKP
        S S  NR +Y C  CK GFTN QALGGH NIHR++R    ++ S   ++  S+P+ S+    ST     P  F ++ +Y    S+P
Subjt:  SNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDR----ANKSKKMTYFSSIPI-SKQVDQSTFIYFEPLLFSSLVNYEESTSKP

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein3.5e-0763.41Show/hide
Query:  REDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRA
        R   S S +    Y C FC+ GF+NAQALGGHMNIHRKDRA
Subjt:  REDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRA

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein7.5e-1058.33Show/hide
Query:  NSDSSSEEQSDRSSREDKSN-SFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSK
        +S +SSE  + R  R   S+ S   R  Y C FCK GFTNAQALGGHMNIHR+DR NK+K
Subjt:  NSDSSSEEQSDRSSREDKSN-SFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGAAAAAATTAGGTATCAACTCGGATAGTTCGAGCGAAGAACAATCAGATCGATCGTCAAGAGAAGACAAATCGAATTCTTTTGCAAATAGAAGTTCATATGG
GTGCATGTTTTGCAAGCACGGATTCACCAACGCTCAAGCTCTTGGAGGGCACATGAATATCCATAGAAAAGATCGAGCCAATAAATCTAAGAAAATGACCTATTTTTCTT
CTATTCCAATTAGCAAGCAAGTTGACCAATCAACTTTCATCTATTTTGAGCCACTTTTGTTTAGTTCTTTGGTGAATTATGAAGAATCAACTTCAAAGCCACATGGCCTT
TTGAATATGGACCTTTGGGGTTTAGATTTGTGCCTCAAAAATGGACCAAGCAAGGGAGTGGATTTGGAGCTTCGACTTGGCTATGATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGAAAAAATTAGGTATCAACTCGGATAGTTCGAGCGAAGAACAATCAGATCGATCGTCAAGAGAAGACAAATCGAATTCTTTTGCAAATAGAAGTTCATATGG
GTGCATGTTTTGCAAGCACGGATTCACCAACGCTCAAGCTCTTGGAGGGCACATGAATATCCATAGAAAAGATCGAGCCAATAAATCTAAGAAAATGACCTATTTTTCTT
CTATTCCAATTAGCAAGCAAGTTGACCAATCAACTTTCATCTATTTTGAGCCACTTTTGTTTAGTTCTTTGGTGAATTATGAAGAATCAACTTCAAAGCCACATGGCCTT
TTGAATATGGACCTTTGGGGTTTAGATTTGTGCCTCAAAAATGGACCAAGCAAGGGAGTGGATTTGGAGCTTCGACTTGGCTATGATCCTTAA
Protein sequenceShow/hide protein sequence
MDLKKLGINSDSSSEEQSDRSSREDKSNSFANRSSYGCMFCKHGFTNAQALGGHMNIHRKDRANKSKKMTYFSSIPISKQVDQSTFIYFEPLLFSSLVNYEESTSKPHGL
LNMDLWGLDLCLKNGPSKGVDLELRLGYDP