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Sed0006005 (gene) of Chayote v1 genome

Gene IDSed0006005
OrganismSechium edule (Chayote v1)
DescriptionProto-oncogene c-Ski
Genome locationLG03:11749094..11749815
RNA-Seq ExpressionSed0006005
SyntenySed0006005
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TIA96569.1 hypothetical protein E3P95_03202 [Wallemia ichthyophaga]1.9e-0642.86Show/hide
Query:  VDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKL-ETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEK
        V+  +EKI E  + K+ + P+ K  +VP+ K+ +    K+ EVPI KI EK+ E P+ K+ E+PIEK+    V KV E P+ K  E PIEK
Subjt:  VDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKL-ETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEK

WP_098695020.1 non-ribosomal peptide synthetase [Nocardia terpenica]5.4e-0943.02Show/hide
Query:  ASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPI
        A + ++G AS+G+VG AP+G+VG   +R+VG    G+VG  P+GK+G      +G+V   PI +VG  PVG++G A IG+   A I
Subjt:  ASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPI

XP_029683558.1 ski oncogene isoform X1 [Takifugu rubripes]9.5e-0642.72Show/hide
Query:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQL
        +EK+G   L KVG  P+ KVG +P+ KVG     KVG +P+ K G     P+ KV  LP+EKVG  P+ KVG  P+ K    P+EK     L+K     L
Subjt:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQL

Query:  EKL
        EK+
Subjt:  EKL

XP_029683562.1 ski oncogene isoform X5 [Takifugu rubripes]4.3e-0645.35Show/hide
Query:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEK
        +EK+G   L KVG  P+ KVG +P+ KVG     KVG +P+ K G     P+ KV  LP+EKVG  P+ KVG  P+ K    P+EK
Subjt:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEK

XP_034340960.1 testis-specific gene A8 protein-like [Arvicanthis niloticus]9.2e-0937.17Show/hide
Query:  DASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGK-----IGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQL
        +A + K  EA + KV +AP+ KV + P+ K  +    K  E P+ K     + +  E P+ KVEE P+ KV + PV KV EAP+ K  EAP+ K E+  +
Subjt:  DASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGK-----IGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQL

Query:  KKREKRQLEKLEK
         K E+  + K+E+
Subjt:  KKREKRQLEKLEK

TrEMBL top hitse value%identityAlignment
A0A199V498 Uncharacterized protein8.7e-0544.23Show/hide
Query:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQL
        I K+ E  + KV   PI KV   PI KV +    KV   PI K+    E PI KVEE PI KV  PP+ KV E PI K  E PI K E   + K E   +
Subjt:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQL

Query:  EKLE
         K+E
Subjt:  EKLE

A0A291RKR0 Mycobactin synthetase protein B2.6e-0943.02Show/hide
Query:  ASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPI
        A + ++G AS+G+VG AP+G+VG   +R+VG    G+VG  P+GK+G      +G+V   PI +VG  PVG++G A IG+   A I
Subjt:  ASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPI

A0A4V4M1W7 Uncharacterized protein7.9e-0636.36Show/hide
Query:  VDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEK-LETPIGKVEELPIEKVGKPP----VGKVGEAPIGKAREAPIEKAEKDQ
        V+  +EKI E  + K+ + P+ K  +VP+ K+ +    K+ EVPI KI EK +E P+ K+ E+P+EK+ + P    V KV E P+ K  E P+EK  +  
Subjt:  VDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEK-LETPIGKVEELPIEKVGKPP----VGKVGEAPIGKAREAPIEKAEKDQ

Query:  LKKREKRQLE
        ++K  ++ +E
Subjt:  LKKREKRQLE

A0A674MVY4 Proto-oncogene c-Ski4.6e-0642.72Show/hide
Query:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQL
        +EK+G   L KVG  P+ KVG +P+ KVG     KVG +P+ K G     P+ KV  LP+EKVG  P+ KVG  P+ K    P+EK     L+K     L
Subjt:  IEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQL

Query:  EKL
        EK+
Subjt:  EKL

R9AHB5 Anucleate primary sterigmata protein A1.0e-0536.21Show/hide
Query:  VDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEK-LETPIGKVEELPIEKVGKPP----VGKVGEAPIGKAREAPIEKAEKDQ
        V+  +EKI E  + K+ + P+ K  +VP+ K+ +    K+ EVPI KI EK +E P+ K+ E+P+EK+ + P    V KV E P+ K  E P+EK  +  
Subjt:  VDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEK-LETPIGKVEELPIEKVGKPP----VGKVGEAPIGKAREAPIEKAEKDQ

Query:  LKKREKRQLE-KLEKV
        ++K  ++ +E  +EK+
Subjt:  LKKREKRQLE-KLEKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31290.1 ARGONAUTE 34.3e-0433.78Show/hide
Query:  IGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIG
        +G+  +G VG   +G VG+  +  VG  G G VG+V +G +G   +  +G V +  +  VG+  VG VG   +G
Subjt:  IGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTGACGCGTCAATTGAGAAAATTGGAGAAGCGTCACTTGGAAAAGTTGGTGATGCGCCAATTGGGAAAGTTGGAAAAGTGCCAATTAGAAAAGTCGGAGACAC
GGGCACTGGGAAAGTTGGAGAAGTGCCAATTGGAAAAATTGGAGAAAAGTTAGAGACGCCAATTGGGAAAGTTGAAGAACTGCCAATTGAAAAAGTTGGAAAACCGCCAG
TTGGGAAAGTCGGAGAAGCACCAATCGGAAAAGCTAGAGAAGCACCAATCGAGAAAGCTGAAAAAGACCAATTGAAAAAGCGGGAGAAAAGGCAATTGGAAAAGTTGGAA
AAGGTCGATTGGAGGAGCTGGTTCAATTGGGAAAGTTGGAGAAGAAGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTGACGCGTCAATTGAGAAAATTGGAGAAGCGTCACTTGGAAAAGTTGGTGATGCGCCAATTGGGAAAGTTGGAAAAGTGCCAATTAGAAAAGTCGGAGACAC
GGGCACTGGGAAAGTTGGAGAAGTGCCAATTGGAAAAATTGGAGAAAAGTTAGAGACGCCAATTGGGAAAGTTGAAGAACTGCCAATTGAAAAAGTTGGAAAACCGCCAG
TTGGGAAAGTCGGAGAAGCACCAATCGGAAAAGCTAGAGAAGCACCAATCGAGAAAGCTGAAAAAGACCAATTGAAAAAGCGGGAGAAAAGGCAATTGGAAAAGTTGGAA
AAGGTCGATTGGAGGAGCTGGTTCAATTGGGAAAGTTGGAGAAGAAGCAACTGA
Protein sequenceShow/hide protein sequence
MDVDASIEKIGEASLGKVGDAPIGKVGKVPIRKVGDTGTGKVGEVPIGKIGEKLETPIGKVEELPIEKVGKPPVGKVGEAPIGKAREAPIEKAEKDQLKKREKRQLEKLE
KVDWRSWFNWESWRRSN