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Sed0006011 (gene) of Chayote v1 genome

Gene IDSed0006011
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin domain-containing protein
Genome locationLG05:37248918..37252814
RNA-Seq ExpressionSed0006011
SyntenySed0006011
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8124679.1 hypothetical protein FH972_019544 [Carpinus fangiana]1.1e-5394.59Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDG VKKIRKPKPWKHPQPITKT L+Q+RDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

XP_004146021.1 ubiquitin domain-containing protein 1 [Cucumis sativus]1.1e-5393.69Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDG VKKIRKPKPWK+PQPITKTDLV+MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NL+
Subjt:  KYVLSEPSNLI

XP_008463752.1 PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo]8.2e-5494.59Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDG VKKIRKPKPWK+PQPITKTDLV+MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

XP_022144511.1 ubiquitin domain-containing protein 1-like [Momordica charantia]9.7e-5596.4Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDGPVKKIRKPK WKHPQPITKT+LVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

XP_038898666.1 ubiquitin domain-containing protein 1-like [Benincasa hispida]1.3e-5495.5Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA G+GPVKKIRKPKPWKHPQPI+KTDLV+MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

TrEMBL top hitse value%identityAlignment
A0A0A0KZH7 UBD domain-containing protein5.2e-5493.69Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDG VKKIRKPKPWK+PQPITKTDLV+MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NL+
Subjt:  KYVLSEPSNLI

A0A1S3CJZ5 ubiquitin domain-containing protein 1-like4.0e-5494.59Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDG VKKIRKPKPWK+PQPITKTDLV+MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

A0A5N6RSN1 UBD domain-containing protein5.2e-5494.59Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDG VKKIRKPKPWKHPQPITKT L+Q+RDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

A0A6J1CTM1 ubiquitin domain-containing protein 1-like4.7e-5596.4Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDGPVKKIRKPK WKHPQPITKT+LVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

A0A6J1IYX4 ubiquitin domain-containing protein 1-like1.5e-5393.69Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGSSQA GDGPVKKIRKPK WKHPQPITKTDL +MRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
        KYVLSEP+NLI
Subjt:  KYVLSEPSNLI

SwissProt top hitse value%identityAlignment
Q5EAE3 Ubiquitin domain-containing protein 21.7e-2251.35Show/hide
Query:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A+G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
         Y L+ P N+I
Subjt:  KYVLSEPSNLI

Q640W6 Ubiquitin domain-containing protein 13.0e-2251.35Show/hide
Query:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A+G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
         Y L+ P N+I
Subjt:  KYVLSEPSNLI

Q6DG43 Ubiquitin domain-containing protein 24.6e-2352.25Show/hide
Query:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A+G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA+A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
         Y LS P N+I
Subjt:  KYVLSEPSNLI

Q6PGH0 Ubiquitin domain-containing protein 21.7e-2251.35Show/hide
Query:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A+G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
         Y L+ P N+I
Subjt:  KYVLSEPSNLI

Q8WUN7 Ubiquitin domain-containing protein 21.7e-2251.35Show/hide
Query:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        G+  A+G     K  KPK WK   P+T   L   RDEFWDTAP + GRKEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G +Y+LP
Subjt:  GSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNLI
         Y L+ P N+I
Subjt:  KYVLSEPSNLI

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein4.8e-4473.21Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGAKYEL
        MGC+ SS+ I +G  +KIR+PK WKHPQPI++ +L QMR+EFWDTAPHYGG+KEIWDALRAAAE  DL+LAQ I++SAGVIVQ+ DLTICYDE+G+KYEL
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGAKYEL

Query:  PKYVLSEPSNLI
        PKYVL +PSNLI
Subjt:  PKYVLSEPSNLI

AT1G53400.1 Ubiquitin domain-containing protein4.8e-5283.64Show/hide
Query:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP
        MGCAGS+Q+  DG VKKIRKPKPWKH QPITK +L+++R+EFWDTAPHYGGRKEIWDALRAAAEAD++LAQAIVDSAGVIVQ+ DLT+CYDERGAKYELP
Subjt:  MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELP

Query:  KYVLSEPSNL
        KYVLSEP+NL
Subjt:  KYVLSEPSNL

AT5G45740.1 Ubiquitin domain-containing protein2.2e-4472.57Show/hide
Query:  MGCAGSSQAIGDGPV--KKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYE
        MGC GSSQA  +G    KKI KPKPW H +PIT+  L  MR+EFWDT+PHYGG++EIW+ALRAAAEADL LAQ IVDSAGVIVQ+ DLT+C+DERGA+YE
Subjt:  MGCAGSSQAIGDGPV--KKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYE

Query:  LPKYVLSEPSNLI
        LP+YVLSEP+NLI
Subjt:  LPKYVLSEPSNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTGCCGGATCTTCACAGGCCATCGGCGATGGGCCTGTGAAAAAAATTAGGAAGCCTAAACCTTGGAAGCATCCCCAGCCTATAACAAAGACAGATCTTGTTCA
GATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGAGGCAGAAAAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTG
TTGATAGTGCAGGGGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAAATACGAATTGCCCAAGTATGTTTTGAGTGAACCAAGCAACCTG
ATTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTGTAAATAAATAAATAATAATAATAAAACCTGAGAGGCTCTAAGCTTCGGCTTTAGACTTTTTGGACTCTCAGCCAAAGATTCTTCGCTCTGTTCACTTTCTCTTCC
AAATCTGCATTCCCCTTCTCTTCTCCCTTAATCCTTCTTTCTTTCTTTCTTTCTTTCTTCTTTTCAGTTTTGCAGTCTTTAATGGGTTGTGCCGGATCTTCACAGGCCAT
CGGCGATGGGCCTGTGAAAAAAATTAGGAAGCCTAAACCTTGGAAGCATCCCCAGCCTATAACAAAGACAGATCTTGTTCAGATGCGTGATGAATTTTGGGATACTGCAC
CTCATTATGGAGGCAGAAAAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACGCTAGCACAAGCAATTGTTGATAGTGCAGGGGTCATTGTACAAAGT
GCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAAATACGAATTGCCCAAGTATGTTTTGAGTGAACCAAGCAACCTGATTTGAAGTAAGTAAATTGCAGAGAGAGA
TGAGGAAATGTATGTTTTGGTGTTGAAAATTGATTGTAAATCATGTATATTACAATGTTACTCCCTTTCAAATGTTTCATACCGTCTGCCGCCTTTCAAACATTCCCTAA
CTTGCTGTGTAGTTTGTTTTGATCAAATCAAATCTCTATTTGGAGTTCTCACTTGTTGTAGATGCTA
Protein sequenceShow/hide protein sequence
MGCAGSSQAIGDGPVKKIRKPKPWKHPQPITKTDLVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPSNL
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