; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006013 (gene) of Chayote v1 genome

Gene IDSed0006013
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationLG07:38149677..38151100
RNA-Seq ExpressionSed0006013
SyntenySed0006013
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655851.1 cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus]5.9e-3868.94Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-------DHGGV-TPKERI---DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF-
        MST LDLRRT LEI RRP + LQ+PPPT +       DHGGV   K+R+   D  AEEL CRTPTSAENKIPAV QCPPAPRKR+R P+CRRRL+ELEF 
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-------DHGGV-TPKERI---DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF-

Query:  --VRREEIEPYLASGFEHEDRVKKSAKRSFCE
          V R+EIEPYL S F+HEDRV+KSAKRSFCE
Subjt:  --VRREEIEPYLASGFEHEDRVKKSAKRSFCE

XP_022957068.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]1.1e-3974.22Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---
        MST LDLRRT LE+ RRPA+ LQ+P P    AADHGGV   KERID+    AEELCCRTPTSAENKIP VLQCPPAPRKR+R PTCRRRLIELEFV    
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---

Query:  REEIEPYLASGFEHEDRVKKSAKRSFCE
        REEIEPY  S F+HE+RVKKSAK SFCE
Subjt:  REEIEPYLASGFEHEDRVKKSAKRSFCE

XP_022992922.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]5.3e-3973.44Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---
        MST LDLRRT LE+ RRPA+ LQ+P P    AADHGGV   KERID+     EELCCRTPTSAENKIP VLQCPPAPRKR+R PTCRRRLIELEFV    
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---

Query:  REEIEPYLASGFEHEDRVKKSAKRSFCE
        REEIEPY  S F+HE+RVKKSAK SFCE
Subjt:  REEIEPYLASGFEHEDRVKKSAKRSFCE

XP_023531359.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]1.4e-3974.22Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKER---IDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---
        MST LDLRRT LE+ RRPA+ LQ+P P    AADHGGV   KER   ID  AEELCCRTPTSAENKIP VLQCPPAPRKR+R PTCRRRLIELEFV    
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKER---IDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---

Query:  REEIEPYLASGFEHEDRVKKSAKRSFCE
        REEIEPY  S F+HE+RVKKSAK SFCE
Subjt:  REEIEPYLASGFEHEDRVKKSAKRSFCE

XP_038893025.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]2.4e-3972.8Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPPT---AADHGGV-TPKERIDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF---VRREE
        MST LDLRRT LEI RRP + LQ+P P+   A DHGGV   K+RI    EELCCRTPTSAENKIPAV+QCPPAPRKR+R P+CRRRL+ELEF   V REE
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPPT---AADHGGV-TPKERIDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF---VRREE

Query:  IEPYLASGFEHEDRVKKSAKRSFCE
        IEPYL S F+HEDRV+KSAKRSFCE
Subjt:  IEPYLASGFEHEDRVKKSAKRSFCE

TrEMBL top hitse value%identityAlignment
A0A0A0KRI0 Uncharacterized protein2.8e-3868.94Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-------DHGGV-TPKERI---DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF-
        MST LDLRRT LEI RRP + LQ+PPPT +       DHGGV   K+R+   D  AEEL CRTPTSAENKIPAV QCPPAPRKR+R P+CRRRL+ELEF 
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-------DHGGV-TPKERI---DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF-

Query:  --VRREEIEPYLASGFEHEDRVKKSAKRSFCE
          V R+EIEPYL S F+HEDRV+KSAKRSFCE
Subjt:  --VRREEIEPYLASGFEHEDRVKKSAKRSFCE

A0A1S3BFF9 cyclin-dependent protein kinase inhibitor SMR1-like1.4e-3768.7Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-----DHGGV-TPKERI----DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF--
        MST LDLRRT LEI RRP + LQ+P P+ A     D GGV   K+RI    D  AEELCCRTPTSAENKIPAV+QCPPAPRKR+R P+CRRRL+ELEF  
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-----DHGGV-TPKERI----DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF--

Query:  -VRREEIEPYLASGFEHEDRVKKSAKRSFCE
         V R+EIEPYL + F+HEDRV+KSAKRSFCE
Subjt:  -VRREEIEPYLASGFEHEDRVKKSAKRSFCE

A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like1.4e-3768.7Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-----DHGGV-TPKERI----DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF--
        MST LDLRRT LEI RRP + LQ+P P+ A     D GGV   K+RI    D  AEELCCRTPTSAENKIPAV+QCPPAPRKR+R P+CRRRL+ELEF  
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPPTAA-----DHGGV-TPKERI----DSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEF--

Query:  -VRREEIEPYLASGFEHEDRVKKSAKRSFCE
         V R+EIEPYL + F+HEDRV+KSAKRSFCE
Subjt:  -VRREEIEPYLASGFEHEDRVKKSAKRSFCE

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like5.2e-4074.22Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---
        MST LDLRRT LE+ RRPA+ LQ+P P    AADHGGV   KERID+    AEELCCRTPTSAENKIP VLQCPPAPRKR+R PTCRRRLIELEFV    
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---

Query:  REEIEPYLASGFEHEDRVKKSAKRSFCE
        REEIEPY  S F+HE+RVKKSAK SFCE
Subjt:  REEIEPYLASGFEHEDRVKKSAKRSFCE

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like2.6e-3973.44Show/hide
Query:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---
        MST LDLRRT LE+ RRPA+ LQ+P P    AADHGGV   KERID+     EELCCRTPTSAENKIP VLQCPPAPRKR+R PTCRRRLIELEFV    
Subjt:  MSTHLDLRRTFLEIARRPALHLQVPPP---TAADHGGV-TPKERIDS---AAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVR---

Query:  REEIEPYLASGFEHEDRVKKSAKRSFCE
        REEIEPY  S F+HE+RVKKSAK SFCE
Subjt:  REEIEPYLASGFEHEDRVKKSAKRSFCE

SwissProt top hitse value%identityAlignment
Q29Q81 Cyclin-dependent protein kinase inhibitor SMR64.0e-0548Show/hide
Query:  EELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVRREEIE
        EE C  TPT+ E KIP +L+CPPAPRKRR    CR  ++   F    ++E
Subjt:  EELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVRREEIE

Arabidopsis top hitse value%identityAlignment
AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS9.1e-0531.96Show/hide
Query:  TPKERIDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLP-------------TCRRRLIELE---FVRREEIEPYLASGFEHEDRVKKSAKRSF
        T K+  D   ++L C TPTS E+KIPAV+  PP P ++ R P             +C+R+L+       + REEI+ + +S + +E       +RS+
Subjt:  TPKERIDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLP-------------TCRRRLIELE---FVRREEIEPYLASGFEHEDRVKKSAKRSF

AT5G40460.1 unknown protein2.8e-0648Show/hide
Query:  EELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVRREEIE
        EE C  TPT+ E KIP +L+CPPAPRKRR    CR  ++   F    ++E
Subjt:  EELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVRREEIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACACACCTCGATCTCCGACGAACATTCCTCGAAATCGCCCGCCGTCCTGCGCTCCACCTTCAGGTTCCGCCTCCCACGGCGGCCGATCACGGCGGCGTAACTCC
AAAAGAGCGAATCGATTCCGCCGCAGAGGAGTTGTGCTGCCGCACGCCGACCTCCGCCGAGAACAAAATTCCGGCGGTGCTGCAATGTCCGCCGGCGCCGAGAAAGCGGA
GGCGGCTTCCGACGTGTAGGCGGAGATTGATCGAGCTCGAGTTCGTGCGAAGAGAAGAGATCGAACCGTATTTAGCTTCCGGTTTCGAGCACGAAGATAGAGTTAAGAAA
TCTGCAAAAAGAAGCTTCTGCGAGTTAGAGAAATTGGGTGATCTGTCTGGTAGTTTTGACAATTTTCATGTTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACACACCTCGATCTCCGACGAACATTCCTCGAAATCGCCCGCCGTCCTGCGCTCCACCTTCAGGTTCCGCCTCCCACGGCGGCCGATCACGGCGGCGTAACTCC
AAAAGAGCGAATCGATTCCGCCGCAGAGGAGTTGTGCTGCCGCACGCCGACCTCCGCCGAGAACAAAATTCCGGCGGTGCTGCAATGTCCGCCGGCGCCGAGAAAGCGGA
GGCGGCTTCCGACGTGTAGGCGGAGATTGATCGAGCTCGAGTTCGTGCGAAGAGAAGAGATCGAACCGTATTTAGCTTCCGGTTTCGAGCACGAAGATAGAGTTAAGAAA
TCTGCAAAAAGAAGCTTCTGCGAGTTAGAGAAATTGGGTGATCTGTCTGGTAGTTTTGACAATTTTCATGTTGAGTGA
Protein sequenceShow/hide protein sequence
MSTHLDLRRTFLEIARRPALHLQVPPPTAADHGGVTPKERIDSAAEELCCRTPTSAENKIPAVLQCPPAPRKRRRLPTCRRRLIELEFVRREEIEPYLASGFEHEDRVKK
SAKRSFCELEKLGDLSGSFDNFHVE