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Sed0006019 (gene) of Chayote v1 genome

Gene IDSed0006019
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:332184..332540
RNA-Seq ExpressionSed0006019
SyntenySed0006019
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR032238 - Putative ATP-synthase-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048855.1 putative permease/transmembrane protein [Cucumis melo var. makuwa]4.1e-1144.44Show/hide
Query:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH
        G E    +K E ++K+ +N K   +   V + + S+ G  + GWW  +FH + +Q WMVPFSL+LMIAPIFV++SV I+S FC+SMD  S+  + S DH
Subjt:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH

KAF3973370.1 hypothetical protein CMV_003195 [Castanea mollissima]1.4e-1146.74Show/hide
Query:  KEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDHV
        KEE   +R E +KS ++ +W  M   SM+GGL+ GWWE+++H TNRQLWMVPF L+L+I P FV  S+ + S +CSS   ++  T  +S  V
Subjt:  KEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDHV

KAG6582696.1 hypothetical protein SDJN03_22698, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2157.01Show/hide
Query:  QTWRFGSGGEEAGSAVKEERKEKRHENLKSSMMGAW-VSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFF-----CSSM
        +TW F  GGEEAG  ++   K    EN+KS  M  W VSMAV SM+GG+VFGWWEF+FH TNRQLWMVPF LILM  P+FV+MS+LI++F       +SM
Subjt:  QTWRFGSGGEEAGSAVKEERKEKRHENLKSSMMGAW-VSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFF-----CSSM

Query:  DHNSTWT
        D N   T
Subjt:  DHNSTWT

KGN56384.1 hypothetical protein Csa_011278 [Cucumis sativus]5.0e-3368.8Show/hide
Query:  MDQTWRFGSGG-EEAG----SAVKEE-RKEKRHENLKSSMMGAWV-SMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFC
        MDQTWRF  GG EEAG    SA+KEE R +KR+ N+KS  +  WV SM VA + GGLVFGWW FQFH TNRQLWMVPFSL+LMIAPIFVMMS+LI S FC
Subjt:  MDQTWRFGSGG-EEAG----SAVKEE-RKEKRHENLKSSMMGAWV-SMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFC

Query:  SSMDHNSTWTLPSSDHVIQQSIETR
        +SMD  +T   PSSDHVIQQS++TR
Subjt:  SSMDHNSTWTLPSSDHVIQQSIETR

KGN56386.1 hypothetical protein Csa_010779 [Cucumis sativus]7.0e-1144.44Show/hide
Query:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH
        G E    +K E ++K+ +N K   +   V + + S+ G  + GWW  +FH + +Q WMVPFSL+LMIAPIFV++SV I+S FC+SMD  S+  + S DH
Subjt:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH

TrEMBL top hitse value%identityAlignment
A0A0A0L5S1 Uncharacterized protein2.4e-3368.8Show/hide
Query:  MDQTWRFGSGG-EEAG----SAVKEE-RKEKRHENLKSSMMGAWV-SMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFC
        MDQTWRF  GG EEAG    SA+KEE R +KR+ N+KS  +  WV SM VA + GGLVFGWW FQFH TNRQLWMVPFSL+LMIAPIFVMMS+LI S FC
Subjt:  MDQTWRFGSGG-EEAG----SAVKEE-RKEKRHENLKSSMMGAWV-SMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFC

Query:  SSMDHNSTWTLPSSDHVIQQSIETR
        +SMD  +T   PSSDHVIQQS++TR
Subjt:  SSMDHNSTWTLPSSDHVIQQSIETR

A0A0A0L8F5 Uncharacterized protein3.4e-1144.44Show/hide
Query:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH
        G E    +K E ++K+ +N K   +   V + + S+ G  + GWW  +FH + +Q WMVPFSL+LMIAPIFV++SV I+S FC+SMD  S+  + S DH
Subjt:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH

A0A2N9FJR8 Uncharacterized protein5.8e-1145.57Show/hide
Query:  KEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMD
        ++E  +++ E +K+ ++ +W  M   SM+GGL F WWEF++H TN QLWMVPFSLIL++ P+FV  S+ ++    S MD
Subjt:  KEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMD

A0A5D3DB24 Putative permease/transmembrane protein2.0e-1144.44Show/hide
Query:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH
        G E    +K E ++K+ +N K   +   V + + S+ G  + GWW  +FH + +Q WMVPFSL+LMIAPIFV++SV I+S FC+SMD  S+  + S DH
Subjt:  GEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDH

A0A7N2MCB4 Uncharacterized protein1.7e-1048.05Show/hide
Query:  KEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSS
        +EE   +R E +K+ ++ +W    + SM+GGL  GWWE+++HSTN QLWMVPF L+L+I P+FV  S+ + S  CSS
Subjt:  KEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAACATGGAGATTTGGAAGTGGTGGAGAAGAAGCTGGATCAGCAGTGAAGGAAGAAAGAAAAGAGAAGAGGCATGAGAACCTAAAGAGTTCTATGATGGGAGC
TTGGGTTTCAATGGCAGTGGCAAGCATGATGGGAGGGCTGGTGTTTGGTTGGTGGGAGTTTCAGTTTCATTCAACAAATAGACAACTGTGGATGGTACCATTTAGTCTTA
TTTTGATGATTGCACCCATTTTTGTTATGATGTCTGTTCTTATCACTAGTTTCTTCTGTTCTTCCATGGATCACAATTCTACTTGGACACTTCCATCATCAGACCATGTG
ATCCAACAATCTATTGAAACTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAACATGGAGATTTGGAAGTGGTGGAGAAGAAGCTGGATCAGCAGTGAAGGAAGAAAGAAAAGAGAAGAGGCATGAGAACCTAAAGAGTTCTATGATGGGAGC
TTGGGTTTCAATGGCAGTGGCAAGCATGATGGGAGGGCTGGTGTTTGGTTGGTGGGAGTTTCAGTTTCATTCAACAAATAGACAACTGTGGATGGTACCATTTAGTCTTA
TTTTGATGATTGCACCCATTTTTGTTATGATGTCTGTTCTTATCACTAGTTTCTTCTGTTCTTCCATGGATCACAATTCTACTTGGACACTTCCATCATCAGACCATGTG
ATCCAACAATCTATTGAAACTAGATGA
Protein sequenceShow/hide protein sequence
MDQTWRFGSGGEEAGSAVKEERKEKRHENLKSSMMGAWVSMAVASMMGGLVFGWWEFQFHSTNRQLWMVPFSLILMIAPIFVMMSVLITSFFCSSMDHNSTWTLPSSDHV
IQQSIETR