; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006052 (gene) of Chayote v1 genome

Gene IDSed0006052
OrganismSechium edule (Chayote v1)
DescriptionPUM-HD domain-containing protein
Genome locationLG07:9588419..9591382
RNA-Seq ExpressionSed0006052
SyntenySed0006052
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD7223018.1 unnamed protein product [Cyprideis torosa]8.3e-1224.89Show/hide
Query:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEW
        R  Q +    P  Q +EL+ E       L     G   +Q  I   D    + ++      +  L  H  G   ++ +   CTQ+Q+  +LE L  N E 
Subjt:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEW

Query:  AFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTS
            +  + +GN +IQHV++  +     +++  + G    L+ ++F S VV+KC+++  Q+E  ++VEE  N+   L  + +D F +YV+   L+     
Subjt:  AFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTS

Query:  GTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
               +LV  +   +S+LK++ Y K +  K+
Subjt:  GTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI

KAF8410157.1 hypothetical protein HHK36_002679 [Tetracentron sinense]1.4e-1128.31Show/hide
Query:  LLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFV---RALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDL
        LL    D   E+  +  GC  LQ  +    G  RE ++A +  +  IL     G   V    AL   C     D +   +F  N   F  I      N +
Subjt:  LLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFV---RALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDL

Query:  IQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGIN
        +Q++++  I  +T+ ++  L G F  L+MN+FGS VV+K L+   + +  +I++E   SC  +L + +  +G+YV+  AL    + G I  ++ LV  + 
Subjt:  IQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGIN

Query:  RQVSTLKRHVYRKKVIEKI
        R +  L+ H   K+V++KI
Subjt:  RQVSTLKRHVYRKKVIEKI

KAG6789744.1 hypothetical protein POTOM_005868 [Populus tomentosa]1.6e-1027.86Show/hide
Query:  TSQQRDLLNPEQNRTLCVQIQETIAERFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAF
        T +QR LL P   R   +  +        Q   +  P   I+ L+ E  +   ++AM   GC  L   +    G +++ +L    A+  +L         
Subjt:  TSQQRDLLNPEQNRTLCVQIQETIAERFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAF

Query:  VRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSC
                         +S FG  + ++F +   +  N ++QHV+D  I+  T  I+E L G F  L+MN+FGS VV+KCL    +     I+EEF NS 
Subjt:  VRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSC

Query:  EQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYEL
           + + R+ FG+YV+  ALE   + G IR  + LV  IN     L   +  K+V+ K  ++
Subjt:  EQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYEL

XP_022149262.1 pumilio homolog 12-like [Momordica charantia]3.7e-2026.35Show/hide
Query:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNE
        R  Q ST  +     Q  L +  D VS  A++  GC +LQ  +  E +   ++ I+  V  DLPILM+H  GSAF + LF +C +QQ+  +L S+   NE
Subjt:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNE

Query:  WAFFHICNNY------------------------------------------------------------------------------------------
          F  +C++Y                                                                                          
Subjt:  WAFFHICNNY------------------------------------------------------------------------------------------

Query:  ----------------------HGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGH
                              HGN ++Q  I + I  V + I E L GRF DL+ +  GS VV+KCLR CE +EV KIVEE   +   +  + +D FG+
Subjt:  ----------------------HGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGH

Query:  YVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYELKRHS
        +V+  ALE ++  G ++ +H LV+ I  Q   L  H Y +KV  KI +L   +
Subjt:  YVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYELKRHS

XP_031126758.1 putative pumilio homolog 8, chloroplastic [Ipomoea triloba]2.0e-1027.44Show/hide
Query:  LLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQH
        +L+   D   ++A    GC  LQ  +   DG  RE ++A + A+  +L  H                                         +GN ++Q+
Subjt:  LLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQH

Query:  VIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQV
        ++   I  VT  I++ L G F  L+MN++GS VV+KCL+  E  + +++VEE  +S    L + +D +G+YV   AL      G+ R  H +V  IN   
Subjt:  VIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQV

Query:  STLKRHVYRKKVIEK
        + L  H Y K+V+ K
Subjt:  STLKRHVYRKKVIEK

TrEMBL top hitse value%identityAlignment
A0A067L7Q5 PUM-HD domain-containing protein9.8e-1127.91Show/hide
Query:  LLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQH
        LL E      ++AM   GC  LQ  +    G V+E ++A +  +  +L  H                                         +GN ++Q 
Subjt:  LLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQH

Query:  VIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQV
        V+D NI      ++E L G F  L+MN++GS VV+KCL+ C +     I+EE  +S    L + +D FG+YV+  AL  + + G +   H LV  IN   
Subjt:  VIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQV

Query:  STLKRHVYRKKVIEK
          L  H++ KKV+ +
Subjt:  STLKRHVYRKKVIEK

A0A183BLU7 PUM-HD domain-containing protein6.2e-1324.36Show/hide
Query:  NLTSQQRDLLNPEQNRTLC----VQIQETIAE--------RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAA
        N   Q+  LLN  +N+ +     + + + + E        RF +         +  +L+ E R  V  LA+   GC  +++ + + D   +  I+  + A
Subjt:  NLTSQQRDLLNPEQNRTLC----VQIQETIAE--------RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAA

Query:  DLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQ
         + +L +H  GS  +R +   C +QQ   VLE L GN       +  + +G+ +I+HVI+  +    + IV +L      L+++++GS V+   L +C +
Subjt:  DLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQ

Query:  NEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYE
         +   ++E+       L  +  D +G YV+   LEH    G       +VR +  Q+++L  H Y  +VI ++ E
Subjt:  NEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYE

A0A183C2L7 Uncharacterized protein5.8e-1125.64Show/hide
Query:  TSQQRDLLNP-EQNRTLCVQI-----------QETIAERFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADL
        T+Q+  LLN    NR   +Q+           Q+    RF Q         +  +L+ E R  +  LA+   G   +Q+ + + D   +  I+  ++A +
Subjt:  TSQQRDLLNP-EQNRTLCVQI-----------QETIAERFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADL

Query:  PILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNE
         +L +H  GS  +R +   CT+QQ   VLE L GN       +  + +G  +IQHV++  +    +RIV  L      L  +++GS V++  +++    +
Subjt:  PILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNE

Query:  VVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYE
           IV       E +L +  D +G++V+   LEH    G       +VR +   V TL    Y   VI+ + E
Subjt:  VVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYE

A0A6J1D7G3 pumilio homolog 12-like1.8e-2026.35Show/hide
Query:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNE
        R  Q ST  +     Q  L +  D VS  A++  GC +LQ  +  E +   ++ I+  V  DLPILM+H  GSAF + LF +C +QQ+  +L S+   NE
Subjt:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNE

Query:  WAFFHICNNY------------------------------------------------------------------------------------------
          F  +C++Y                                                                                          
Subjt:  WAFFHICNNY------------------------------------------------------------------------------------------

Query:  ----------------------HGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGH
                              HGN ++Q  I + I  V + I E L GRF DL+ +  GS VV+KCLR CE +EV KIVEE   +   +  + +D FG+
Subjt:  ----------------------HGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGH

Query:  YVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYELKRHS
        +V+  ALE ++  G ++ +H LV+ I  Q   L  H Y +KV  KI +L   +
Subjt:  YVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYELKRHS

A0A7R8W5E8 Hypothetical protein4.0e-1224.89Show/hide
Query:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEW
        R  Q +    P  Q +EL+ E       L     G   +Q  I   D    + ++      +  L  H  G   ++ +   CTQ+Q+  +LE L  N E 
Subjt:  RFHQVSTNRTPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEW

Query:  AFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTS
            +  + +GN +IQHV++  +     +++  + G    L+ ++F S VV+KC+++  Q+E  ++VEE  N+   L  + +D F +YV+   L+     
Subjt:  AFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTS

Query:  GTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
               +LV  +   +S+LK++ Y K +  K+
Subjt:  GTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI

SwissProt top hitse value%identityAlignment
O74438 Meiotic coiled-coil protein 28.3e-0722.75Show/hide
Query:  GSAFVRALFLACTQQQMDTVLESLFGNNEWAFFH---ICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIV
        GS  V+ +F  C ++     +E +        FH   I     GN ++QH+++       KR+++AL+ R  + +++QF S V++K +++  +N +   +
Subjt:  GSAFVRALFLACTQQQMDTVLESLFGNNEWAFFH---ICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIV

Query:  EEFTN-----SCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKV
        ++ TN     + + L+ IA D +G+Y+    ++ +   G     + ++  I + + +L+   Y +KV
Subjt:  EEFTN-----SCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKV

P0DN95 Pumilio homolog 153.7e-0723.89Show/hide
Query:  ILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQK
        +L ++  +   + +   G   ++ L    +++  D +++ +          +C N +GN ++Q+++      VT  + + L G +  L+ +++GS VVQK
Subjt:  ILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQK

Query:  CLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
        CL + E +   +I+ E  +  + LL    D +G YV+  A   + +   +RH   L+  INR V  ++ +VY +K+++K+
Subjt:  CLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI

Q09829 Pumilio domain-containing protein C4G8.03c3.6e-1026.78Show/hide
Query:  TPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNY
        T N QI  LL      ++ LA    G   LQ  IA       E +   +  +L  L  +  G   ++     C  +    + E L  +   +   +  N 
Subjt:  TPNVQIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNY

Query:  HGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTN--SCEQLLGIARDYFGHYVL
        +GN L+QHV++ NI+  T+RI+E   G  C L++ +F S  +++C+R    +   ++++EF +  + EQLL    D + +YV+
Subjt:  HGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTN--SCEQLLGIARDYFGHYVL

Q10238 Meiotic PUF family protein 13.7e-0723.3Show/hide
Query:  VHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKI
        V  +GS  V+ +F  C ++   T L+ +  N +     IC  + GN +IQH+I+   E   +RI+ +L+      + N++ S VV++ LR C      + 
Subjt:  VHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKI

Query:  VEEFTNSCEQ-----LLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYELK
        V+E T    +     L  IA + +G+Y+    ++++    T    + +   + + + +L+ H Y +++   + + K
Subjt:  VEEFTNSCEQ-----LLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKIYELK

Q9LVC3 Pumilio homolog 129.8e-0829.92Show/hide
Query:  GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLV
        GN ++Q+V +  ++  T  I+E L G + +L+M +  S VV+KCL+  +     +I+ E  N   +L  +  D +G+YV+  AL+   + G +     LV
Subjt:  GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLV

Query:  RGINRQVSTLKRHVYRKKVIEKIYELK
          I   +S+L+ + Y KKV+  +   K
Subjt:  RGINRQVSTLKRHVYRKKVIEKIYELK

Arabidopsis top hitse value%identityAlignment
AT4G25880.1 pumilio 65.9e-0822.6Show/hide
Query:  LMVHNIGSAFVRALFLACTQQQM-----DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLR---
        L +H  G   ++ L   C+         + +LES+          +  + +GN + QHV++       +RI   L G    L++++F S V++KCL    
Subjt:  LMVHNIGSAFVRALFLACTQQQM-----DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLR---

Query:  NCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
          E++ ++K +     S   LL + +D +G+YV    ++ ++ + T      L   +    S LK++ Y K ++ ++
Subjt:  NCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI

AT4G25880.2 pumilio 65.9e-0822.6Show/hide
Query:  LMVHNIGSAFVRALFLACTQQQM-----DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLR---
        L +H  G   ++ L   C+         + +LES+          +  + +GN + QHV++       +RI   L G    L++++F S V++KCL    
Subjt:  LMVHNIGSAFVRALFLACTQQQM-----DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLR---

Query:  NCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
          E++ ++K +     S   LL + +D +G+YV    ++ ++ + T      L   +    S LK++ Y K ++ ++
Subjt:  NCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI

AT4G25880.3 pumilio 65.9e-0822.6Show/hide
Query:  LMVHNIGSAFVRALFLACTQQQM-----DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLR---
        L +H  G   ++ L   C+         + +LES+          +  + +GN + QHV++       +RI   L G    L++++F S V++KCL    
Subjt:  LMVHNIGSAFVRALFLACTQQQM-----DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLR---

Query:  NCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
          E++ ++K +     S   LL + +D +G+YV    ++ ++ + T      L   +    S LK++ Y K ++ ++
Subjt:  NCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI

AT5G09610.1 pumilio 211.0e-0729.91Show/hide
Query:  DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGH
        D + E +  N +W  F    + +G  ++Q+++       T  I E L G F  LAM + GS VV+KCL++    +  +++EEF  + ++ + +  D FG+
Subjt:  DTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGH

Query:  YVLVCAL
        +V+  AL
Subjt:  YVLVCAL

AT5G56510.1 pumilio 127.0e-0929.92Show/hide
Query:  GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLV
        GN ++Q+V +  ++  T  I+E L G + +L+M +  S VV+KCL+  +     +I+ E  N   +L  +  D +G+YV+  AL+   + G +     LV
Subjt:  GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLV

Query:  RGINRQVSTLKRHVYRKKVIEKIYELK
          I   +S+L+ + Y KKV+  +   K
Subjt:  RGINRQVSTLKRHVYRKKVIEKIYELK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGAAAACAGAACAATAATCAAAATCAAAATCAAAATCAAAAACAAAATGAGCAGAGATCTAATCACAATCCAAACTCCTCCTCCTCCAGTAATCCCGACTCTCT
GTTTCGAAACGCAACACTCGGCCGCAACATCGCGATCGGAGGCGATCGGGTGAATTCAGTGCGAGATCGAATGCTGAATTCACTTGCGATTCCAGGAAACCTCACCTCGC
AGCAACGCGATCTGTTGAATCCAGAGCAAAACCGAACGCTGTGCGTCCAGATTCAAGAAACCATAGCCGAGCGATTCCATCAGGTTAGTACAAATCGAACGCCGAATGTT
CAGATTCAAGAACTCCTAACCGAGCAACGCGATCGCGTGTCGGAGTTGGCGATGACGACCGGAGGATGCGAGTATCTCCAGAGTGTGATTGCGGCGGAGGACGGCGGAGT
GAGAGAGGCGATTCTTGCGATAGTGGCGGCGGATCTTCCGATTCTGATGGTACATAACATCGGATCTGCATTTGTGAGGGCGTTGTTCTTAGCGTGCACGCAACAGCAAA
TGGACACAGTTTTGGAGTCGCTTTTTGGTAACAACGAATGGGCCTTTTTTCATATCTGCAACAATTACCATGGGAACGATTTGATTCAACATGTGATTGATGCAAACATT
GAAGGTGTGACAAAACGCATAGTGGAAGCATTGATGGGGAGATTTTGTGACTTAGCAATGAATCAGTTTGGAAGCCTTGTGGTGCAGAAGTGCTTGAGGAACTGTGAACA
AAATGAAGTTGTGAAGATTGTTGAAGAATTCACAAATTCATGTGAACAACTTCTTGGTATTGCTCGAGATTATTTTGGACATTATGTTCTTGTTTGTGCACTTGAACACG
TCTATACCTCGGGGACTATACGACATTTTCATAACTTGGTGAGAGGCATCAACCGTCAGGTTTCGACTCTCAAACGCCACGTCTATCGGAAAAAAGTCATCGAAAAAATC
TATGAACTTAAGCGCCACTCCCCATTCCAAATTCCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGAAAACAGAACAATAATCAAAATCAAAATCAAAATCAAAAACAAAATGAGCAGAGATCTAATCACAATCCAAACTCCTCCTCCTCCAGTAATCCCGACTCTCT
GTTTCGAAACGCAACACTCGGCCGCAACATCGCGATCGGAGGCGATCGGGTGAATTCAGTGCGAGATCGAATGCTGAATTCACTTGCGATTCCAGGAAACCTCACCTCGC
AGCAACGCGATCTGTTGAATCCAGAGCAAAACCGAACGCTGTGCGTCCAGATTCAAGAAACCATAGCCGAGCGATTCCATCAGGTTAGTACAAATCGAACGCCGAATGTT
CAGATTCAAGAACTCCTAACCGAGCAACGCGATCGCGTGTCGGAGTTGGCGATGACGACCGGAGGATGCGAGTATCTCCAGAGTGTGATTGCGGCGGAGGACGGCGGAGT
GAGAGAGGCGATTCTTGCGATAGTGGCGGCGGATCTTCCGATTCTGATGGTACATAACATCGGATCTGCATTTGTGAGGGCGTTGTTCTTAGCGTGCACGCAACAGCAAA
TGGACACAGTTTTGGAGTCGCTTTTTGGTAACAACGAATGGGCCTTTTTTCATATCTGCAACAATTACCATGGGAACGATTTGATTCAACATGTGATTGATGCAAACATT
GAAGGTGTGACAAAACGCATAGTGGAAGCATTGATGGGGAGATTTTGTGACTTAGCAATGAATCAGTTTGGAAGCCTTGTGGTGCAGAAGTGCTTGAGGAACTGTGAACA
AAATGAAGTTGTGAAGATTGTTGAAGAATTCACAAATTCATGTGAACAACTTCTTGGTATTGCTCGAGATTATTTTGGACATTATGTTCTTGTTTGTGCACTTGAACACG
TCTATACCTCGGGGACTATACGACATTTTCATAACTTGGTGAGAGGCATCAACCGTCAGGTTTCGACTCTCAAACGCCACGTCTATCGGAAAAAAGTCATCGAAAAAATC
TATGAACTTAAGCGCCACTCCCCATTCCAAATTCCACAATGA
Protein sequenceShow/hide protein sequence
MERKQNNNQNQNQNQKQNEQRSNHNPNSSSSSNPDSLFRNATLGRNIAIGGDRVNSVRDRMLNSLAIPGNLTSQQRDLLNPEQNRTLCVQIQETIAERFHQVSTNRTPNV
QIQELLTEQRDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLACTQQQMDTVLESLFGNNEWAFFHICNNYHGNDLIQHVIDANI
EGVTKRIVEALMGRFCDLAMNQFGSLVVQKCLRNCEQNEVVKIVEEFTNSCEQLLGIARDYFGHYVLVCALEHVYTSGTIRHFHNLVRGINRQVSTLKRHVYRKKVIEKI
YELKRHSPFQIPQ