CuGenDBv2

Gene ID	Sed0006054
Organism	Sechium edule (Chayote v1)
Description	FAM192A_Fyv6_N domain-containing protein
Genome location	LG11:30784111..30789532
RNA-Seq Expression	Sed0006054
Synteny	Sed0006054
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR019331 - FAM192A/Fyv6, N-terminal IPR039845 - PSME3-interacting protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579151.1 hypothetical protein SDJN03_23599, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-82

84.04

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Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARI+PRSPEKAGS+A           ES +T DT SD  LEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESED+D
Subjt:  GLVSYSDESEDED

KAG7016669.1 hypothetical protein SDJN02_21779 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-82

84.51

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Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +T DT SD  LEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESED+D
Subjt:  GLVSYSDESEDED

XP_022938625.1 uncharacterized protein LOC111444804 [Cucurbita moschata]

6.2e-84

85.45

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Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +T DT SD PLEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_022993730.1 protein FAM192A [Cucurbita maxima]

1.5e-82

84.51

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Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+LNE++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKA  +A           ES +T DT +D PLEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_023549588.1 protein FAM192A [Cucurbita pepo subsp. pepo]

6.2e-84

85.45

Show/hide

Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +T DT SD PLEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U2Y6 Protein FAM192A

9.0e-81

84.51

Show/hide

Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTA RDRPLFEIL++NKDKRDAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTPDTISDGPLEAATI-
        SFQAAVAAQSI+LNE++EITPPAPAAQEKA VRRET V+RPPSMII+VKPQAKKARIEPRSP+ AGS       KAE    S KT DT SD PLEAA I 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTPDTISDGPLEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5D3BGC9 Protein FAM192A

9.0e-81

84.51

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Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTA RDRPLFEIL++NKDKRDAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTPDTISDGPLEAATI-
        SFQAAVAAQSI+LNE++EITPPAPAAQEKA VRRET V+RPPSMII+VKPQAKKARIEPRSP+ AGS       KAE    S KT DT SD PLEAA I 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTPDTISDGPLEAATI-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1CXV7 protein FAM192A

2.1e-82

86.63

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Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDESGRAIRLM+FVSEEQLDEAKKTRGERVEDGTA RDRPLFEIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQMADA+E+ELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSK-AESAKTPDTISDGPLEAATIGLVSYSDESED
        SFQAAVAAQS ML+ELKE+TPPAP AQEK  VRRET  TR PSMIIKVKPQAKKARIEPRSPEKA ++ +ES KTP++I D P EAATIGLVSYS ESED
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSK-AESAKTPDTISDGPLEAATIGLVSYSDESED

Query:  ED
        ED
Subjt:  ED

A0A6J1FKA5 uncharacterized protein LOC111444804

3.0e-84

85.45

Show/hide

Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +T DT SD PLEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1JZC4 protein FAM192A

7.4e-83

84.51

Show/hide

Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNERFKHRPPKALDEDETEFLDK E SKREYERQMADADEQELR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI
        SFQAAVAAQSI+LNE++EITPPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKA  +A           ES +T DT +D PLEAA TI
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTPDTISDGPLEAA-TI

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

SwissProt top hits

e value

%identity

Alignment

Q91WE2 PSME3-interacting protein

1.3e-07

36.52

Show/hide

Query:  EDESGRAIRLMSFVSEEQLDEAKKTRGERVE-----------DGTAYRDRPLFEILQENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLEMSKREYER
        ED+S   I+   FVSE +LDE +K R E  E              AY  R L+E LQE KD++  E+ E+FK +   + LDEDET FLD++   +   E+
Subjt:  EDESGRAIRLMSFVSEEQLDEAKKTRGERVE-----------DGTAYRDRPLFEILQENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLEMSKREYER

Query:  QMADADEQELRSFQA
        Q  + + +EL+ +++
Subjt:  QMADADEQELRSFQA

Q9GZU8 PSME3-interacting protein

5.0e-04

25.78

Show/hide

Query:  ESGRAIRLMSFVSEEQLDEAKKTRGERVE-----------DGTAYRDRPLFEILQENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLEMSKREYERQM
        + G  I    FVSE +LDE +K R E  E               Y  R L+E LQE KD++  E+ E+FK +   + LDEDET FLD++   +   E+Q 
Subjt:  ESGRAIRLMSFVSEEQLDEAKKTRGERVE-----------DGTAYRDRPLFEILQENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLEMSKREYERQM

Query:  ADADEQELRSFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQA-------KKARIEPRSPEKAGSKAESAKTPDTISDGP--
         + + +EL+ ++  +    I     KE+           P+  + + ++   +   VK ++       K+ + +P   +K    +      +T   GP  
Subjt:  ADADEQELRSFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQA-------KKARIEPRSPEKAGSKAESAKTPDTISDGP--

Query:  -LEAATI------GLVSYSDESEDE
           +A +      GL +YS  S+ E
Subjt:  -LEAATI------GLVSYSDESEDE

Arabidopsis top hits

e value

%identity

Alignment

AT3G62140.1 CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

3.2e-54

57.94

Show/hide

Query:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR
        M DE+ + IRL++FVSEEQLDE+KK RGERVEDGT  RDR L+EIL+ENKDK+DAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQ+A+ ++++LR
Subjt:  MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELR

Query:  SFQAAVAAQSIMLNELKE--ITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTPDTISDGPLEAATIG---------
        +FQAAVAA+S +L+E KE  + PPAP  +E+ P+ +    TRP   IIKVKPQ KKA+   +  ++     + A   D  S   ++    G         
Subjt:  SFQAAVAAQSIMLNELKE--ITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTPDTISDGPLEAATIG---------

Query:  --LVSYSDESEDED
          LVSYSDESED+D
Subjt:  --LVSYSDESEDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGACGAATCTGGGCGAGCAATCCGGCTTATGAGTTTCGTCTCCGAGGAACAGTTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAAGATGGCACTGCTTA
TAGAGATCGACCTCTCTTCGAGATTTTACAGGAAAATAAAGACAAGCGAGATGCCGAATTTAATGAACGGTTCAAGCACAGACCACCGAAGGCTCTGGATGAGGATGAGA
CAGAATTTTTGGATAAATTGGAAATGTCAAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCT
ATTATGCTGAATGAACTGAAGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGAGAAGGCACCAGTTAGGAGAGAAACTCGGGTGACTCGACCCCCGAGTATGATTATTAA
AGTCAAGCCACAGGCAAAAAAGGCCAGGATCGAACCGAGAAGCCCAGAAAAGGCTGGTAGTAAAGCGGAATCAGCAAAAACACCAGATACCATTAGTGATGGGCCTCTTG
AAGCTGCAACAATAGGACTAGTTTCATATAGCGATGAAAGTGAAGATGAAGATTAG

mRNA sequence

Show/hide mRNA sequence

ACACAACCTAAAAAACAAAATAGATTTTTCATACAAATTATGAAGATAGTTGTCTGAAAAAAAAAACGAAGCTTAGTGTATTATTATTTTAGTTTTCTTTTAACCTGAAA
TTTTCGGGTTTTCGAGCGCATTGCGGTCGAGAGTAGCAAGATCGTCGAAGGGAAGTGACTCTGTAAATCCGTAATCCCTTTTGTTTAATCAGTGCAATTTTGAAGAATTC
GAATTGGCGGAAAAGCGATAATGGAGGACGAATCTGGGCGAGCAATCCGGCTTATGAGTTTCGTCTCCGAGGAACAGTTGGATGAAGCCAAGAAAACAAGGGGCGAGCGA
GTTGAAGATGGCACTGCTTATAGAGATCGACCTCTCTTCGAGATTTTACAGGAAAATAAAGACAAGCGAGATGCCGAATTTAATGAACGGTTCAAGCACAGACCACCGAA
GGCTCTGGATGAGGATGAGACAGAATTTTTGGATAAATTGGAAATGTCAAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTCCGCAGTTTTCAAG
CAGCAGTAGCAGCACAATCTATTATGCTGAATGAACTGAAGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGAGAAGGCACCAGTTAGGAGAGAAACTCGGGTGACTCGA
CCCCCGAGTATGATTATTAAAGTCAAGCCACAGGCAAAAAAGGCCAGGATCGAACCGAGAAGCCCAGAAAAGGCTGGTAGTAAAGCGGAATCAGCAAAAACACCAGATAC
CATTAGTGATGGGCCTCTTGAAGCTGCAACAATAGGACTAGTTTCATATAGCGATGAAAGTGAAGATGAAGATTAGCGAATCGAATCGGCTGTTAGAAATTCCAAAACAA
TCACCATATTGTATTTAATTTTTTCTGTGTTGAGATTCTGGAATCAATGAGTTTTTTTTTTCCTTCTTGTGGTAATTGTAGCTTATAAGCTTTGATTATATACATAGAGA
TGAACCGTTGATTCTTGAAATGATTTTAACATTCCTCAGGGTTAATTAAATCTTGGTGAAATATATGGAGGCTTGATTACCATTATGGTTAAAAA

Protein sequence

Show/hide protein sequence

MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQS
IMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTPDTISDGPLEAATIGLVSYSDESEDED

Sed0006054 (gene) of Chayote v1 genome