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Sed0006079 (gene) of Chayote v1 genome

Gene IDSed0006079
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:33382776..33383108
RNA-Seq ExpressionSed0006079
SyntenySed0006079
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]8.8e-2466Show/hide
Query:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        + ++ L  +  IAIL SS TAR  +V AA+P    +KDFSLFPCISFVP ATK VIDVLKNAVAPHPSCC+AI +L DCSS+FLKDI S +MIL+KS+CA
Subjt:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

KAA0050065.1 hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]2.8e-2264.29Show/hide
Query:  EMKLTFVFLIAILTSSATARMV-VEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        ++ L  +F I IL SS  AR V V AA+P      D SLFPC SFVP+AT+CVIDVLKNAVAPHPSCC+AI +L DCSS+FLKDI S +MIL+KS+CA
Subjt:  EMKLTFVFLIAILTSSATARMV-VEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]8.8e-2464Show/hide
Query:  VLEMKLTFVFLIAILTSSATA-RMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        + ++ L     IAIL SS TA   +V AA+P    ++DFSLFPCISFVP+ATKCVIDVLKN VAPHPSCC+AI +L DCSS+FLKDI S +MIL+KS+CA
Subjt:  VLEMKLTFVFLIAILTSSATA-RMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

KAE8653017.1 hypothetical protein Csa_004564 [Cucumis sativus]1.7e-2264.36Show/hide
Query:  EMKLTFVFL-IAILTSSATAR--MVVEAASPNPMETKD-FSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVC
        ++ L  + L IAIL SS  AR  MV  AA   P+ T++ FSLFPCIS VP+ATKCVIDVL N VAPHPSCC+AI KL DCSS FLKDI + +MIL+KSVC
Subjt:  EMKLTFVFL-IAILTSSATAR--MVVEAASPNPMETKD-FSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVC

Query:  A
        A
Subjt:  A

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]5.5e-2667Show/hide
Query:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        + ++ L  +  IAIL SS TAR  +V AA+P    ++DFSLFPCISFVP+ATKCVIDVLKNAVAPHPSCC+AI +L DCSS+FLKDI SS+MIL+KS+CA
Subjt:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein4.2e-2466Show/hide
Query:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        + ++ L  +  IAIL SS TAR  +V AA+P    +KDFSLFPCISFVP ATK VIDVLKNAVAPHPSCC+AI +L DCSS+FLKDI S +MIL+KS+CA
Subjt:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

A0A5A7U8Y3 Uncharacterized protein1.4e-2264.29Show/hide
Query:  EMKLTFVFLIAILTSSATARMV-VEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        ++ L  +F I IL SS  AR V V AA+P      D SLFPC SFVP+AT+CVIDVLKNAVAPHPSCC+AI +L DCSS+FLKDI S +MIL+KS+CA
Subjt:  EMKLTFVFLIAILTSSATARMV-VEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

A0A5A7U904 Uncharacterized protein1.8e-2258.33Show/hide
Query:  MAAKSLNVLEMKLTFVFL--IAILTSSATA-RMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSE
        MAAKSL    MKL  +FL   AI T  A A +  V    P+P  T+D S FPC SFVPEATKC+IDV K+ +APHP+CCKAI KL+ CSS F   I S++
Subjt:  MAAKSLNVLEMKLTFVFL--IAILTSSATA-RMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSE

Query:  MILIKSVC
        MILIKSVC
Subjt:  MILIKSVC

A0A5A7U9B0 Uncharacterized protein4.2e-2464Show/hide
Query:  VLEMKLTFVFLIAILTSSATA-RMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        + ++ L     IAIL SS TA   +V AA+P    ++DFSLFPCISFVP+ATKCVIDVLKN VAPHPSCC+AI +L DCSS+FLKDI S +MIL+KS+CA
Subjt:  VLEMKLTFVFLIAILTSSATA-RMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

A0A5D3CFS6 Uncharacterized protein2.7e-2667Show/hide
Query:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA
        + ++ L  +  IAIL SS TAR  +V AA+P    ++DFSLFPCISFVP+ATKCVIDVLKNAVAPHPSCC+AI +L DCSS+FLKDI SS+MIL+KS+CA
Subjt:  VLEMKLTFVFLIAILTSSATAR-MVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAAAGTCATTGAACGTACTCGAAATGAAGTTAACATTTGTATTCCTAATAGCGATTTTAACATCCTCAGCAACTGCTCGTATGGTGGTCGAGGCGGCATCGCC
TAATCCAATGGAAACGAAGGATTTCTCATTGTTTCCGTGCATATCATTCGTTCCCGAGGCAACGAAATGCGTTATCGATGTGTTAAAGAATGCAGTTGCTCCTCATCCTT
CTTGTTGCAAAGCCATTTTTAAGTTGCAAGATTGTTCTTCTGAATTTCTCAAAGACATTTCTTCGAGTGAAATGATTTTGATTAAAAGTGTATGTGCTTTTTCTTTAGGT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAAAGTCATTGAACGTACTCGAAATGAAGTTAACATTTGTATTCCTAATAGCGATTTTAACATCCTCAGCAACTGCTCGTATGGTGGTCGAGGCGGCATCGCC
TAATCCAATGGAAACGAAGGATTTCTCATTGTTTCCGTGCATATCATTCGTTCCCGAGGCAACGAAATGCGTTATCGATGTGTTAAAGAATGCAGTTGCTCCTCATCCTT
CTTGTTGCAAAGCCATTTTTAAGTTGCAAGATTGTTCTTCTGAATTTCTCAAAGACATTTCTTCGAGTGAAATGATTTTGATTAAAAGTGTATGTGCTTTTTCTTTAGGT
TAA
Protein sequenceShow/hide protein sequence
MAAKSLNVLEMKLTFVFLIAILTSSATARMVVEAASPNPMETKDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAIFKLQDCSSEFLKDISSSEMILIKSVCAFSLG