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Sed0006085 (gene) of Chayote v1 genome

Gene IDSed0006085
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationLG05:45075571..45078913
RNA-Seq ExpressionSed0006085
SyntenySed0006085
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148513.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia]1.8e-4283.65Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MAS+LFK I+ESS K  SS RN S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]3.0e-4284.62Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFKA+VESS K  SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
XP_022986645.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]4.7e-4385.58Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFKA+VESS K+ SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]1.0e-4285.58Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFKA+VESS K  SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]6.1e-4386.54Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFKA+VESS K  SS RN S+ A NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGD+NPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein1.1e-4082.69Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFK ++ESS    SS RN S+ A NQI  HTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
         HHH
Subjt:  DHHH
A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial4.3e-4284.62Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFK ++ESS    SS RN S+ A NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial8.6e-4383.65Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MAS+LFK I+ESS K  SS RN S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.5e-4284.62Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFKA+VESS K  SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial2.3e-4385.58Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ
        MASSLFKA+VESS K+ SS R+ S+  +NQI  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDR EPA+CKYCGLRYTQ
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQ

Query:  DHHH
        DHHH
Subjt:  DHHH
SwissProt top hitse value%identityAlignment
Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial6.1e-3871.17Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGAT-------NQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKY
        MAS+L KA++ S    SS  RNFSV  T       + +  HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPAICKY
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGAT-------NQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH
Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related4.4e-3971.17Show/hide
Query:  MASSLFKAIVESSFKSSSSVRNFSVGAT-------NQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKY
        MAS+L KA++ S    SS  RNFSV  T       + +  HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPAICKY
Subjt:  MASSLFKAIVESSFKSSSSVRNFSVGAT-------NQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGTCTGTTCAAAGCGATTGTTGAATCTTCCTTCAAATCTTCATCTTCTGTTAGGAATTTCAGTGTTGGCGCTACCAACCAAATCAGTCCGCACACCGCCAA
ATGGATGCAGGATACAAGTAAAAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTTGAAGGCCGTATCGTTGCATGTGAGGGAGACAGCAATCCTGCCC
TCGGGCACCCAATTGAGTTCATATGTCTTGATCGGGCGGAGCCCGCCATATGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAG
mRNA sequenceShow/hide mRNA sequence
TATGAATACTTGAAATGTTAGGGTTCTTTATTTGAAAAAAAAAAAAATCAGCATTTTTAGTTTAAGGTTCGGAAACCGTAGCTCTGGTTGGCGATCTCTTTTTCTCCATC
TGAATCAATGGCGTCGAGTCTGTTCAAAGCGATTGTTGAATCTTCCTTCAAATCTTCATCTTCTGTTAGGAATTTCAGTGTTGGCGCTACCAACCAAATCAGTCCGCACA
CCGCCAAATGGATGCAGGATACAAGTAAAAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTTGAAGGCCGTATCGTTGCATGTGAGGGAGACAGCAAT
CCTGCCCTCGGGCACCCAATTGAGTTCATATGTCTTGATCGGGCGGAGCCCGCCATATGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAATCTGC
AAGTGATCATTCCAGCCAGCAACCCTCCACTTGGAAAGATAATTTCCCTACCTTTCCTAATTTAATTTCTGTAATGCTATGACTTGATGGTTATACTCCTGCCTGCATAA
ATAGGAATTTGAGGACTCCACTCACACACACTTTGGCTGGATTGTCTTTGCCAAATTTGTTTCATTGCTTAAAAGGATTTGTTTGTTGACCTATTTTGCTGACTCAAATG
CCAATAAAAGGTTTTGATATCTTGGAGCTGCAA
Protein sequenceShow/hide protein sequence
MASSLFKAIVESSFKSSSSVRNFSVGATNQISPHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRAEPAICKYCGLRYTQDHHH