CuGenDBv2

Gene ID	Sed0006099
Organism	Sechium edule (Chayote v1)
Description	late embryogenesis abundant protein 1-like
Genome location	LG09:1639022..1640942
RNA-Seq Expression	Sed0006099
Synteny	Sed0006099
Gene Ontology terms	NA
InterPro domains	IPR039624 - Stress-induced protein KIN1/KIN2

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031971.1 late embryogenesis abundant protein 1 isoform X1 [Cucumis melo var. makuwa]

1.9e-19

62.77

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MSNMQQ+ NA QTKG TQARTEEW+E TK          +S+SAQ QLCA S+ H  H++ Q+PT+FLQQTGEK+ HMAQ AV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

XP_008460707.2 PREDICTED: late embryogenesis abundant protein 1 isoform X1 [Cucumis melo]

1.9e-19

62.77

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MSNMQQ+ NA QTKG TQARTEEW+E TK          +S+SAQ QLCA S+ H  H++ Q+PT+FLQQTGEK+ HMAQ AV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

XP_011649123.1 late embryogenesis abundant protein D-7 [Cucumis sativus]

1.7e-17

59.57

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MSNMQQ+ NA QTKG TQ RTEEW+E TK          +S+SAQ QLCA S+ H  H+  Q+P + LQQTGEK+ HMAQ AV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

XP_022964507.1 late embryogenesis abundant protein 1-like [Cucurbita moschata]

4.6e-18

61.29

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MS+MQQ+FN DQTK LTQARTEEW+E T+ T         +DSAQ QL A      H  +Q+P TFLQQTGEK+ HMAQDAV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

XP_023000573.1 late embryogenesis abundant protein 1-like [Cucurbita maxima]

2.1e-18

61.29

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MS+MQQ+FNADQT+ L+QARTEEW+E T+ T         +DSAQ QL A      H  +Q+PTTFLQQTGEK+ HMAQDAV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI39 Uncharacterized protein

8.5e-18

59.57

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MSNMQQ+ NA QTKG TQ RTEEW+E TK          +S+SAQ QLCA S+ H  H+  Q+P + LQQTGEK+ HMAQ AV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

A0A1S3CCL5 late embryogenesis abundant protein 1 isoform X1

9.0e-20

62.77

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MSNMQQ+ NA QTKG TQARTEEW+E TK          +S+SAQ QLCA S+ H  H++ Q+PT+FLQQTGEK+ HMAQ AV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

A0A5A7SQZ2 Late embryogenesis abundant protein 1 isoform X1

9.0e-20

62.77

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MSNMQQ+ NA QTKG TQARTEEW+E TK          +S+SAQ QLCA S+ H  H++ Q+PT+FLQQTGEK+ HMAQ AV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTK---------ETSDSAQTQLCAPSS-HLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

A0A6J1HHZ6 late embryogenesis abundant protein 1-like

2.2e-18

61.29

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MS+MQQ+FN DQTK LTQARTEEW+E T+ T         +DSAQ QL A      H  +Q+P TFLQQTGEK+ HMAQDAV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

A0A6J1KN05 late embryogenesis abundant protein 1-like

1.0e-18

61.29

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Query:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE
        MS+MQQ+FNADQT+ L+QARTEEW+E T+ T         +DSAQ QL A      H  +Q+PTTFLQQTGEK+ HMAQDAV+TVKETLGM +
Subjt:  MSNMQQNFNADQTKGLTQARTEEWLEVTKET---------SDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein

2.5e-06

34.29

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Query:  QQNFNADQTKGLTQARTEEWLEVTKETSDSAQTQLC---------------------APSSHLPHK----QQQQPTTFLQQTGEKVAHMAQDAVETVKET
        QQ FNA Q +G  Q + E+W E  K+T+ SA  +                       A  SH  +K     Q+Q      QTGE V +MAQ A++ VK +
Subjt:  QQNFNADQTKGLTQARTEEWLEVTKETSDSAQTQLC---------------------APSSHLPHK----QQQQPTTFLQQTGEKVAHMAQDAVETVKET

Query:  LGMSE
        LGM+E
Subjt:  LGMSE

Sequences

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CDS sequence

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ATGTCTAACATGCAACAAAATTTCAATGCTGACCAAACCAAAGGCCTAACTCAGGCAAGAACAGAAGAATGGTTGGAGGTCACAAAAGAAACAAGTGATTCAGCTCAAAC
TCAACTTTGTGCTCCTTCATCTCATCTCCCACACAAACAACAACAACAACCAACTACATTTCTCCAACAGACTGGAGAAAAGGTGGCTCACATGGCTCAGGATGCAGTGG
AAACAGTGAAGGAAACACTTGGAATGAGTGAATTTGGATATAAATTCATTTGGAATTAG

mRNA sequence

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Protein sequence

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MSNMQQNFNADQTKGLTQARTEEWLEVTKETSDSAQTQLCAPSSHLPHKQQQQPTTFLQQTGEKVAHMAQDAVETVKETLGMSEFGYKFIWN

Sed0006099 (gene) of Chayote v1 genome