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Sed0006108 (gene) of Chayote v1 genome

Gene IDSed0006108
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L14, chloroplastic
Genome locationContig00297:37163..37531
RNA-Seq ExpressionSed0006108
SyntenySed0006108
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR005745 - Ribosomal protein L14P, bacterial-type
IPR019972 - Ribosomal protein L14P, conserved site
IPR036853 - Ribosomal protein L14 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_004841820.1 ribosomal protein L14 [Cucumis melo subsp. melo]9.3e-5999.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

YP_009430663.1 ribosomal protein L14 [Gynostemma cardiospermum]1.2e-5898.36Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAV+IDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

YP_009439840.1 ribosomal protein L14 [Gynostemma laxiflorum]9.3e-5999.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAV+IDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

YP_009753040.1 ribosomal protein L14 [Gerrardanthus macrorhizus]1.2e-5898.36Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPE+L
Subjt:  AIARELRQLNFTKIISLAPEVL

YP_009945452.1 ribosomal protein L14 [Sechium edule]7.1e-59100Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

TrEMBL top hitse value%identityAlignment
A0A1S4EU43 50S ribosomal protein L14, chloroplastic4.5e-5999.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

A0A1X9Q175 50S ribosomal protein L14, chloroplastic4.5e-5999.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

A0A218KG78 50S ribosomal protein L14, chloroplastic4.5e-5999.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

A0A6H0ERK3 50S ribosomal protein L14, chloroplastic3.5e-59100Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

G3ETT4 50S ribosomal protein L14, chloroplastic4.5e-5999.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

SwissProt top hitse value%identityAlignment
A0A372 50S ribosomal protein L14, chloroplastic4.3e-5994.26Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQT LNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIK+AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKI+SLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

B1A971 50S ribosomal protein L14, chloroplastic4.3e-5995.08Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQT LNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIK+AVPNTPLERSEVIRAVIVRTCKELKR NGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AI RELRQLNFTKI+SLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

Q0G9S5 50S ribosomal protein L14, chloroplastic3.3e-5994.26Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIK+AVPN PL RSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKI+SLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

Q49KW2 50S ribosomal protein L14, chloroplastic4.3e-5994.26Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQ+ LNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKI+SLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

Q8WKP4 50S ribosomal protein L14, chloroplastic1.2e-6199.18Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AIARELRQLNFTKIISLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein1.4e-1235.29Show/hide
Query:  LNVADNSGARELMCIRIIGASNR----RYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIA
        +N ADN+GA+ L  I + G   R      A +GD+++A +KK  P+    R +V+ AVIVR  K  +R++G+ + ++DNA V+++ +G  KG+ I G I 
Subjt:  LNVADNSGARELMCIRIIGASNR----RYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIA

Query:  RELRQLNFTKIISLAPEVL
        +E   L + +I S A  ++
Subjt:  RELRQLNFTKIISLAPEVL

AT1G17560.1 Ribosomal protein L14p/L23e family protein6.3e-1330.67Show/hide
Query:  IQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKK------------AVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVID-
        IQ  T+L   DNS A+E+MCI+ +    ++ A +GDIIV  +K+            A+P   +++  V+  V+VR      R +G  +++DDNA VV+  
Subjt:  IQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKK------------AVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVID-

Query:  ----------------QEGNPKGTRIFGAIARELRQLNFTKIISLAPEVL
                        +   P GTR+FG +  E+R     KI+SLA  ++
Subjt:  ----------------QEGNPKGTRIFGAIARELRQLNFTKIISLAPEVL

AT5G46160.1 Ribosomal protein L14p/L23e family protein5.3e-2039.37Show/hide
Query:  IQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPK
        IQ  T+L V DNSGA+++MCI+ +    ++ A +GD IVA +K+A+PN  +++  V+  V+VR   +  R +G  +R+DDNA V++D        +  P 
Subjt:  IQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPK

Query:  GTRIFGAIARELRQLNFTKIISLAPEV
        GTR+FG +  ELR+    KI++LA  V
Subjt:  GTRIFGAIARELRQLNFTKIISLAPEV

AT5G46160.2 Ribosomal protein L14p/L23e family protein5.3e-2039.37Show/hide
Query:  IQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPK
        IQ  T+L V DNSGA+++MCI+ +    ++ A +GD IVA +K+A+PN  +++  V+  V+VR   +  R +G  +R+DDNA V++D        +  P 
Subjt:  IQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPK

Query:  GTRIFGAIARELRQLNFTKIISLAPEV
        GTR+FG +  ELR+    KI++LA  V
Subjt:  GTRIFGAIARELRQLNFTKIISLAPEV

ATCG00780.1 ribosomal protein L141.5e-5992.62Show/hide
Query:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG
        MIQPQT LNVADNSGARELMCIRIIGASNRRYAHIGD+IVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR NG IIRYDDNAAVVIDQEGNPKGTR+FG
Subjt:  MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFG

Query:  AIARELRQLNFTKIISLAPEVL
        AI RELRQLNFTKI+SLAPEVL
Subjt:  AIARELRQLNFTKIISLAPEVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAACCTCAAACCCTTTTGAATGTAGCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGA
CATTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACG
GTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTTAAAT
TTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCAACCTCAAACCCTTTTGAATGTAGCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGA
CATTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACG
GTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTTAAAT
TTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAA
Protein sequenceShow/hide protein sequence
MIQPQTLLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLN
FTKIISLAPEVL