CuGenDBv2

Gene ID	Sed0006110
Organism	Sechium edule (Chayote v1)
Description	Photosystem II CP43 reaction center protein
Genome location	LG13:18644222..18645521
RNA-Seq Expression	Sed0006110
Synteny	Sed0006110
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR036001 - Photosystem antenna protein-like superfamily IPR044900 - Photosystem II CP43 reaction centre protein superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QFQ46451.1 photosystem II CP43 chlorophyll apoprotein [Astronia smilacifolia]

2.2e-185

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

YP_005352703.1 psbC gene product [Ginkgo biloba]

2.6e-186

83.03

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLISSAVLGFGGIYHAL+GPETLEESF FFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLV KALYFGGVYDTWAPGGGDVR+ITNLTL PS                                  SICI GGIWHILTKPFAWARRA VW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGAL+VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSFCSRILPIRRSFMACRKGSCSGRRI
        EPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F   I  + RSF+AC KGSCS  RI
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSFCSRILPIRRSFMACRKGSCSGRRI

YP_009318793.1 photosystem II 44 kDa protein [Blakea schlimii]

2.2e-185

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

YP_009477381.1 photosystem II CP43 chlorophyll apoprotein [Tecomaria capensis]

1.3e-185

88.77

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

YP_010047982.1 photosystem II CP43 chlorophyll apoprotein [Pilea cadierei]

2.2e-185

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

TrEMBL top hits

e value

%identity

Alignment

A0A2P1GAE9 Photosystem II CP43 reaction center protein

6.3e-186

88.77

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

A0A5P8GCS2 Photosystem II CP43 reaction center protein

1.1e-185

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

A0A5P8GU18 Photosystem II CP43 reaction center protein

1.1e-185

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

A0A6H0EG87 Photosystem II CP43 reaction center protein

1.1e-185

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

H9A972 Photosystem II CP43 reaction center protein

1.3e-186

83.03

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLISSAVLGFGGIYHAL+GPETLEESF FFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLV KALYFGGVYDTWAPGGGDVR+ITNLTL PS                                  SICI GGIWHILTKPFAWARRA VW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGAL+VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSFCSRILPIRRSFMACRKGSCSGRRI
        EPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F   I  + RSF+AC KGSCS  RI
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSFCSRILPIRRSFMACRKGSCSGRRI

SwissProt top hits

e value

%identity

Alignment

B1NWE6 Photosystem II CP43 reaction center protein

6.5e-188

88.22

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

P06413 Photosystem II CP43 reaction center protein

3.8e-188

88.49

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

Q33C41 Photosystem II CP43 reaction center protein

3.8e-188

88.49

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Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

Q3C1I3 Photosystem II CP43 reaction center protein

3.8e-188

88.49

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Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

Q68S10 Photosystem II CP43 reaction center protein

6.5e-188

88.22

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Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  ++   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

3.3e-187

87.67

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS                                  SICI GGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS----------------------------------SICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
        SGEAYLSYSL ALSV GFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL

Query:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF
        EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSP+  +S   F
Subjt:  EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLSF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACCTATTCGAAGTGGCTCATTTCGTACCGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCTCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCCGGTGG
GGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTGTTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCC
TTGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTCTAGGTGCTTTTCTTCTAGTA
TTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTACGAAAAATTACCAACTTGACCCTTAGCCCAAGTTCCATTTGTATACTTGG
TGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTT
TTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGA
GACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTTATTTTTGGGGGAGAGACTATGCG
TTTTTGGGATCTCCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTAGACTTGAGTAGGCTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGG
AATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGTGGTGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAAGAAGTTGGTTAGCTACCTCTCA
TTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCGGCCGCAGGATTTGA

mRNA sequence

Show/hide mRNA sequence

AGCTGGTCGTGACCAAGAAACCACCGGTTTCGCTTGGTGGGCCGGGAATGCCCGACTTATCAATTTATCTGGTAAACTACTGGGGGCTCATGTAGCCCATGCCGGATTAA
TCGTATTCTGGGCCGGAGCAATGAACCTATTCGAAGTGGCTCATTTCGTACCGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCTCACCTAGCTACTCTAGGT
TGGGGGGTAGGTCCCGGTGGGGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTGTTGGGTTTTGGCGGTATTTATCATGC
ACTTCTGGGACCCGAGACCCTTGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTC
TAGGTGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTACGAAAAATTACCAACTTGACCCTTAGCCCA
AGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGG
TGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAG
CATTTACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTTATT
TTTGGGGGAGAGACTATGCGTTTTTGGGATCTCCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTAGACTTGAGTAGGCTGAAAAAAGACATCCAACCTTG
GCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGTGGTGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAAGA
AGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCGGCCGCAGGATTTGA

Protein sequence

Show/hide protein sequence

MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLV
FKALYFGGVYDTWAPGGGDVRKITNLTLSPSSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVR
DQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPKKLVSYLS
FCSRILPIRRSFMACRKGSCSGRRI

Sed0006110 (gene) of Chayote v1 genome