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Sed0006132 (gene) of Chayote v1 genome

Gene IDSed0006132
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:34371203..34375919
RNA-Seq ExpressionSed0006132
SyntenySed0006132
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607652.1 hypothetical protein SDJN03_00994, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4289.69Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MS GNGVKS AK++KSSEPLL+KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MKNQKL+M LGVFTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

XP_004138643.2 uncharacterized protein LOC101217188 [Cucumis sativus]2.8e-4292.78Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MSL NGVKS AK+LKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MK QKLTMTLGV TAFSIGVGVPI+AVVFQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

XP_008441241.1 PREDICTED: uncharacterized protein LOC103485430 [Cucumis melo]4.8e-4292.71Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTAS
        MSLGNG+KS AK+LKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MK QKLTMTLGV TAFSIGVGVPI+AVVFQQKKTAS
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTAS

XP_022981661.1 uncharacterized protein LOC111480717 [Cucurbita maxima]1.8e-4188.66Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MS GNGVKS AK++KSSEPLL+KSANRGFHST VKRMGGHAHGHDEPYYLHAKHMYNLD+MKNQKL+M LGVFTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

XP_038899385.1 uncharacterized protein LOC120086696 [Benincasa hispida]3.7e-4291.75Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MSL NGVKS AK+LKSSE LLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MKNQKLTMTLGVFTAFSIGV VPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

TrEMBL top hitse value%identityAlignment
A0A0A0LQ20 Uncharacterized protein6.8e-4291.75Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MSL NGVKS AK+LKSSEPLL KSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MK QKLTMTLGV TAFSIGVGVPI+AVVFQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

A0A1S3B3R2 uncharacterized protein LOC1034854302.3e-4292.71Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTAS
        MSLGNG+KS AK+LKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MK QKLTMTLGV TAFSIGVGVPI+AVVFQQKKTAS
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTAS

A0A6J1CR70 uncharacterized protein LOC1110134982.6e-4188.66Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MSL NGVKS AK+L+SSE LL+KSANRGFHSTG KRMGGHAHGHDEPYYLHAKHMYNLD+MKNQKLTMTLGVFTAFSIGV VPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

A0A6J1EHC8 uncharacterized protein LOC1114333821.5e-4188.66Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MS GNGVKS AK++KSSEPLL+KSANRG HSTGVKRMGGHAHGHDEPYYLHAKHMYNLD+MKNQKL+M LGVFTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

A0A6J1J2Q3 uncharacterized protein LOC1114807178.9e-4288.66Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        MS GNGVKS AK++KSSEPLL+KSANRGFHST VKRMGGHAHGHDEPYYLHAKHMYNLD+MKNQKL+M LGVFTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72020.1 unknown protein2.0e-3064.95Show/hide
Query:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG
        M+L   ++S +K++ SSE  + +S  R FHSTGVK+M G  HG  + YYLHAKHMYNLD+MK Q L M+LGVFTAFSIGVGVPIFAVVFQQ+KT SG
Subjt:  MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGGCAATGGAGTGAAGTCCTTTGCAAAGGTGCTGAAGTCTTCAGAACCATTGTTGGTGAAATCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAAT
GGGAGGACACGCACATGGGCACGACGAACCATACTATTTGCACGCGAAGCACATGTACAACTTGGATAAGATGAAAAACCAGAAGCTAACCATGACGCTTGGAGTATTCA
CCGCATTCAGCATCGGTGTGGGCGTTCCAATCTTTGCAGTCGTCTTTCAGCAAAAGAAGACCGCCTCTGGATGA
mRNA sequenceShow/hide mRNA sequence
GGGTTTTTGTGTTATTTTGCCCTAATTGCTGACCTCTCTATAAAAGCTTGCCTTCTACACATCAAAAATCATTTCGGTCTTTGTCACTGCCAGAACAAATTGAACTCTTG
GTTGGGTACATAAGTGAAAAGGGAGAACGAACTGTTAGAAGAGAAAATGTCTTTGGGCAATGGAGTGAAGTCCTTTGCAAAGGTGCTGAAGTCTTCAGAACCATTGTTGG
TGAAATCAGCTAATCGAGGGTTTCACTCAACTGGTGTGAAGAGAATGGGAGGACACGCACATGGGCACGACGAACCATACTATTTGCACGCGAAGCACATGTACAACTTG
GATAAGATGAAAAACCAGAAGCTAACCATGACGCTTGGAGTATTCACCGCATTCAGCATCGGTGTGGGCGTTCCAATCTTTGCAGTCGTCTTTCAGCAAAAGAAGACCGC
CTCTGGATGATCACTGAAACAATGTGTGCACCACAATAAGAAAGATATGTTGCAGCCAACTCTGTTCGTTTTCTCAACTCTGTATAAACTCTCATTTCAAATGCACAGAA
ACTCAGAAACTGGATTCTGTTTTTGCCAATAAGTCTTTTCATCGTACTCCCATTATTCGACATTTTGATCCATTTTGTTATATCCTTTCACAAGATATTTAATCGTCTAG
ATTTCTTGTGTTTAGTCTTCCCCTAACTATTTTCTTTATTACAATGAATTTTTATTGGCACCAAGTTGGAGGAGGT
Protein sequenceShow/hide protein sequence
MSLGNGVKSFAKVLKSSEPLLVKSANRGFHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDKMKNQKLTMTLGVFTAFSIGVGVPIFAVVFQQKKTASG