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Sed0006200 (gene) of Chayote v1 genome

Gene IDSed0006200
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:35461664..35462339
RNA-Seq ExpressionSed0006200
SyntenySed0006200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578441.1 hypothetical protein SDJN03_22889, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0454.05Show/hide
Query:  HQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED
        + TSV +Y NEISYD+VSGFTL ISK                DIK+        DGVIMD  FEQSVKPDDSED
Subjt:  HQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED

KAG7016003.1 hypothetical protein SDJN02_21107 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0633.17Show/hide
Query:  QFSEQKMRRSLISKNPIAFAFMGLQ--------ITTLSLPELSVGIK--SNHQTSV--------------------------------------------
        QF+EQ+M+RS I KNPIAF FM L         ITTL LPEL+VG K  +++Q SV                                            
Subjt:  QFSEQKMRRSLISKNPIAFAFMGLQ--------ITTLSLPELSVGIK--SNHQTSV--------------------------------------------

Query:  ----------------------------------MNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDD
                                          ++Y NEISYD+VSGFTL ISK                DIK+        DGVIMD  FEQSVKPDD
Subjt:  ----------------------------------MNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDD

Query:  SE
        SE
Subjt:  SE

XP_022133527.1 uncharacterized protein LOC111006089 [Momordica charantia]7.7e-0654.17Show/hide
Query:  TSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED
        +S+++Y  EISYD+VSGFTLYISK                DIK+        DGVIMD EFEQSVKPDDSED
Subjt:  TSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED

XP_022939922.1 uncharacterized protein LOC111445644 [Cucurbita moschata]2.5e-0454.05Show/hide
Query:  HQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED
        + TSV +Y NEISYD+VSGFTL ISK                DIK+        DGVIMD  FEQSVKPDDSED
Subjt:  HQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED

XP_023549508.1 uncharacterized protein LOC111807988 [Cucurbita pepo subsp. pepo]2.5e-0450.65Show/hide
Query:  KSNHQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED
        ++ + TSV +Y NEISYD+VSGFTL ISK                D+K+        DGVIMD  FEQSVKPDDSED
Subjt:  KSNHQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED

TrEMBL top hitse value%identityAlignment
A0A6J1BWY4 uncharacterized protein LOC1110060893.7e-0654.17Show/hide
Query:  TSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED
        +S+++Y  EISYD+VSGFTLYISK                DIK+        DGVIMD EFEQSVKPDDSED
Subjt:  TSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED

A0A6J1FI64 uncharacterized protein LOC1114456441.2e-0454.05Show/hide
Query:  HQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED
        + TSV +Y NEISYD+VSGFTL ISK                DIK+        DGVIMD  FEQSVKPDDSED
Subjt:  HQTSVMNYKNEISYDSVSGFTLYISK----------------DIKE--------DGVIMDTEFEQSVKPDDSED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATTGTGGAAGGGAAGCAATTAAGATGGAGGCAGTTTAGTGAACAGAAAATGAGGAGGAGCTTAATTTCAAAAAACCCAATTGCCTTTGCTTTTATGGGTTTACA
GATCACAACACTAAGTCTTCCAGAGCTAAGTGTAGGAATAAAGAGTAATCATCAAACTTCAGTTATGAATTATAAGAATGAGATTTCATATGATTCTGTGTCTGGATTTA
CACTGTATATTTCCAAGGACATAAAGGAGGATGGTGTTATAATGGATACTGAGTTTGAGCAATCAGTAAAACCAGATGACAGTGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATATTGTGGAAGGGAAGCAATTAAGATGGAGGCAGTTTAGTGAACAGAAAATGAGGAGGAGCTTAATTTCAAAAAACCCAATTGCCTTTGCTTTTATGGGTTTACA
GATCACAACACTAAGTCTTCCAGAGCTAAGTGTAGGAATAAAGAGTAATCATCAAACTTCAGTTATGAATTATAAGAATGAGATTTCATATGATTCTGTGTCTGGATTTA
CACTGTATATTTCCAAGGACATAAAGGAGGATGGTGTTATAATGGATACTGAGTTTGAGCAATCAGTAAAACCAGATGACAGTGAAGATTGA
Protein sequenceShow/hide protein sequence
MHIVEGKQLRWRQFSEQKMRRSLISKNPIAFAFMGLQITTLSLPELSVGIKSNHQTSVMNYKNEISYDSVSGFTLYISKDIKEDGVIMDTEFEQSVKPDDSED