; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006217 (gene) of Chayote v1 genome

Gene IDSed0006217
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor MYB90-like
Genome locationLG11:9832577..9838475
RNA-Seq ExpressionSed0006217
SyntenySed0006217
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051303.1 transcription factor MYB90-like [Cucumis melo var. makuwa]1.8e-3756.59Show/hide
Query:  KEYGGRRKRRRNGWRTMVGANDFKTLVAGDEQRSKRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGK
        ++ G R+K R+  W       D    VA  +   +R     GRLPGRTANDIKNYWNCHLSKKLNGQ VEK  S K+ SIF K  K K  QEESSK KGK
Subjt:  KEYGGRRKRRRNGWRTMVGANDFKTLVAGDEQRSKRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGK

Query:  AQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSSTSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
          VDD    N  SQ IL++ N++Q+  +  EQ SS SL N+QM     DQ+V KA+  EDGCNKRELWDDWISEMDLWIDSL
Subjt:  AQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSSTSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

XP_004138976.1 transcription factor MYB1-like [Cucumis sativus]6.2e-4369.86Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQV-DDQNGNSQEILLKNKSQHLL--LGFEQQSST
        RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKP S KE S F KQ K K  QEESSK KGK  V DDQN  SQ IL++N        +  EQ SS 
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQV-DDQNGNSQEILLKNKSQHLL--LGFEQQSST

Query:  SLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
        SL N+QM     DQ+V KA+  EDGC+KRELWDDWISEMDLWIDSL
Subjt:  SLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

XP_008441809.1 PREDICTED: transcription factor MYB90-like [Cucumis melo]2.4e-4268.71Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSS
        RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKP S K+ SIF K  K K  QEESSK KGK  VDD    N  SQ IL++ N++Q+  +  EQ SS
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSS

Query:  TSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
         SL N+QM     DQ+V KA+  EDGCNKRELWDDWISEMDLWIDSL
Subjt:  TSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

XP_022933166.1 transcription factor MYB1-like [Cucurbita moschata]5.3e-3459.44Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTS
        RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KP S           K K  QEESSK K K  V+DQNG  Q IL++N++Q++ +  EQ  S  
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTS

Query:  LENLQMDQKVPK---AINVEDGCNKRELWDDWISEMDLWIDSL
        +EN+QMD +  +   A+   DGCNKRELWDDW+SEMDLWIDSL
Subjt:  LENLQMDQKVPK---AINVEDGCNKRELWDDWISEMDLWIDSL

XP_038891035.1 transcription factor MYB1-like [Benincasa hispida]5.6e-4471.53Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGN-SQEILLKNK-SQHLLLGFEQQSSTS
        RWSIIAGRLPGRTANDIKNYWNCHLSK+LNGQGVEK  S KEA+IF K PK K  QEESSK KGK  VDDQNG  SQ IL++N  +Q+L +  EQ SS S
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGN-SQEILLKNK-SQHLLLGFEQQSSTS

Query:  LENLQM----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
        L ++QM    DQ+V KA+  EDG NKRELWDDWISEMDLWIDSL
Subjt:  LENLQM----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

TrEMBL top hitse value%identityAlignment
A0A1S3B4A4 transcription factor MYB90-like1.1e-4268.71Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSS
        RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKP S K+ SIF K  K K  QEESSK KGK  VDD    N  SQ IL++ N++Q+  +  EQ SS
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSS

Query:  TSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
         SL N+QM     DQ+V KA+  EDGCNKRELWDDWISEMDLWIDSL
Subjt:  TSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

A0A5A7U600 Transcription factor MYB90-like8.5e-3856.59Show/hide
Query:  KEYGGRRKRRRNGWRTMVGANDFKTLVAGDEQRSKRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGK
        ++ G R+K R+  W       D    VA  +   +R     GRLPGRTANDIKNYWNCHLSKKLNGQ VEK  S K+ SIF K  K K  QEESSK KGK
Subjt:  KEYGGRRKRRRNGWRTMVGANDFKTLVAGDEQRSKRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGK

Query:  AQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSSTSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
          VDD    N  SQ IL++ N++Q+  +  EQ SS SL N+QM     DQ+V KA+  EDGCNKRELWDDWISEMDLWIDSL
Subjt:  AQVDD---QNGNSQEILLK-NKSQHLLLGFEQQSSTSLENLQM-----DQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

A0A6J1CTG0 transcription factor WER-like4.1e-3258.55Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSK--KEASIFAKQPKMKTFQEESSKLKGKAQV----DDQN---GNSQE-ILLKNKSQHLL
        RWS+IAGRLPGRTANDIKNYWNCHLSKKLNGQ  GVE  ++   KE + F K    +  QEESSK + K +      DQN    NSQE IL++N++Q+L 
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSK--KEASIFAKQPKMKTFQEESSKLKGKAQV----DDQN---GNSQE-ILLKNKSQHLL

Query:  LGFEQQSST--SLENLQMDQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL
        +  EQQS++  SL NLQM+ K  +  + + GCNKRE+WDDWISEMDLWIDSL
Subjt:  LGFEQQSST--SLENLQMDQKVPKAINVEDGCNKRELWDDWISEMDLWIDSL

A0A6J1EYC9 transcription factor MYB1-like2.6e-3459.44Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTS
        RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KP S           K K  QEESSK K K  V+DQNG  Q IL++N++Q++ +  EQ  S  
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTS

Query:  LENLQMDQKVPK---AINVEDGCNKRELWDDWISEMDLWIDSL
        +EN+QMD +  +   A+   DGCNKRELWDDW+SEMDLWIDSL
Subjt:  LENLQMDQKVPK---AINVEDGCNKRELWDDWISEMDLWIDSL

A0A6J1KE93 transcription factor MYB1-like4.4e-3458.74Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTS
        RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KP S           K K  QEESSK K K  ++DQNG  Q IL++N++Q++ +  EQ  S  
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTS

Query:  LENLQMDQKVPK---AINVEDGCNKRELWDDWISEMDLWIDSL
        +EN+QMD +  +   A+   DGCNKRELWDDW+SEMDLWIDSL
Subjt:  LENLQMDQKVPK---AINVEDGCNKRELWDDWISEMDLWIDSL

SwissProt top hitse value%identityAlignment
A0A2R6S148 Transcription factor MYB11.8e-0858.33Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAK
        RWS+IAGRLPGRT+ND+KNYWN HL KKL      +P  K + +I  K
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAK

Q38850 Transcription repressor MYB52.3e-0865Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSK
        RWS+IAGR+PGRT N+IKNYWN HL KKL  QG++    K
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSK

Q9FNV8 Transcription factor MYB1141.4e-0889.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

Q9LTF7 Transcription factor MYB822.3e-0833.57Show/hide
Query:  KNHKKVNNIHKEITKNERKIALKLEI-SHLEGK-EEVERK---EYGGRRKRRRNGWRTMVGANDFKTLVAGDEQ---------RSKRWSIIAGRLPGRTA
        K  +  + + + + K E  + LK  + +H EG   ++ R+   + GG+  R R  W+  +  N  +  ++  EQ            RWS+IAGRLPGRT 
Subjt:  KNHKKVNNIHKEITKNERKIALKLEI-SHLEGK-EEVERK---EYGGRRKRRRNGWRTMVGANDFKTLVAGDEQ---------RSKRWSIIAGRLPGRTA

Query:  NDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKT
        N++KNYWN HL+KK N +    P+S   A+ F  +P M T
Subjt:  NDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKT

Q9ZTC3 Transcription factor MYB902.3e-0833.33Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKK-----------EASIFAKQPKMKTFQEESSKLKGKAQVD--------DQNGNSQEILLK
        RWS+IAGRLPGRTAND+KNYWN HLSKK      +    KK           +  +F  +P+  +     S L G  +VD         +N   +  +  
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKK-----------EASIFAKQPKMKTFQEESSKLKGKAQVD--------DQNGNSQEILLK

Query:  NKS-------QHLLLGFEQQSSTSL-ENLQMDQKVPKAINVEDG
        NK         +L+ G        L EN + D  VP+A   E G
Subjt:  NKS-------QHLLLGFEQQSSTSL-ENLQMDQKVPKAINVEDG

Arabidopsis top hitse value%identityAlignment
AT1G66380.1 myb domain protein 1149.7e-1089.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66390.1 myb domain protein 901.6e-0933.33Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKK-----------EASIFAKQPKMKTFQEESSKLKGKAQVD--------DQNGNSQEILLK
        RWS+IAGRLPGRTAND+KNYWN HLSKK      +    KK           +  +F  +P+  +     S L G  +VD         +N   +  +  
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSKK-----------EASIFAKQPKMKTFQEESSKLKGKAQVD--------DQNGNSQEILLK

Query:  NKS-------QHLLLGFEQQSSTSL-ENLQMDQKVPKAINVEDG
        NK         +L+ G        L EN + D  VP+A   E G
Subjt:  NKS-------QHLLLGFEQQSSTSL-ENLQMDQKVPKAINVEDG

AT3G13540.1 myb domain protein 51.6e-0965Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSK
        RWS+IAGR+PGRT N+IKNYWN HL KKL  QG++    K
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPKSK

AT5G16600.1 myb domain protein 434.8e-0935.51Show/hide
Query:  QRSKRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVE----KPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFE
        Q   RWS IA  LPGRT N+IKN+WN H+ KKL   G++    KP S++EAS           Q+   + K     DD+N    +     + QH L    
Subjt:  QRSKRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVE----KPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFE

Query:  QQSSTSL
        ++++TS+
Subjt:  QQSSTSL

AT5G52600.1 myb domain protein 821.6e-0933.57Show/hide
Query:  KNHKKVNNIHKEITKNERKIALKLEI-SHLEGK-EEVERK---EYGGRRKRRRNGWRTMVGANDFKTLVAGDEQ---------RSKRWSIIAGRLPGRTA
        K  +  + + + + K E  + LK  + +H EG   ++ R+   + GG+  R R  W+  +  N  +  ++  EQ            RWS+IAGRLPGRT 
Subjt:  KNHKKVNNIHKEITKNERKIALKLEI-SHLEGK-EEVERK---EYGGRRKRRRNGWRTMVGANDFKTLVAGDEQ---------RSKRWSIIAGRLPGRTA

Query:  NDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKT
        N++KNYWN HL+KK N +    P+S   A+ F  +P M T
Subjt:  NDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGCATCACAAAAACACCATACCAAATGAACAAAACCCACAAAGAAATTACCATTATAATGAACATCATACATAAAAACCATAAAAAAGTAAACAACATCCATAA
AGAAATTACCAAAAATGAACGAAAAATAGCATTAAAGCTCGAAATTTCTCACCTTGAAGGGAAAGAAGAGGTAGAGAGAAAAGAGTACGGTGGTCGGAGAAAACGCCGTC
GAAATGGATGGAGGACGATGGTCGGAGCTAACGACTTCAAAACGTTGGTCGCAGGTGATGAGCAAAGAAGCAAGAGGTGGTCAATAATTGCTGGAAGATTGCCAGGAAGA
ACAGCAAATGACATAAAGAATTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAAATCCAAAAAAGAAGCATCTATTTTTGCCAAACA
ACCAAAGATGAAAACTTTTCAAGAAGAGAGCAGCAAATTAAAGGGAAAGGCACAAGTTGATGATCAAAATGGCAATAGCCAAGAAATATTGCTTAAAAATAAGAGCCAAC
ACTTACTCCTTGGTTTTGAACAACAAAGTAGCACAAGTTTGGAAAATTTACAAATGGATCAAAAAGTACCCAAAGCAATTAATGTTGAAGATGGCTGCAATAAGAGGGAG
CTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGCATCACAAAAACACCATACCAAATGAACAAAACCCACAAAGAAATTACCATTATAATGAACATCATACATAAAAACCATAAAAAAGTAAACAACATCCATAA
AGAAATTACCAAAAATGAACGAAAAATAGCATTAAAGCTCGAAATTTCTCACCTTGAAGGGAAAGAAGAGGTAGAGAGAAAAGAGTACGGTGGTCGGAGAAAACGCCGTC
GAAATGGATGGAGGACGATGGTCGGAGCTAACGACTTCAAAACGTTGGTCGCAGGTGATGAGCAAAGAAGCAAGAGGTGGTCAATAATTGCTGGAAGATTGCCAGGAAGA
ACAGCAAATGACATAAAGAATTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAAATCCAAAAAAGAAGCATCTATTTTTGCCAAACA
ACCAAAGATGAAAACTTTTCAAGAAGAGAGCAGCAAATTAAAGGGAAAGGCACAAGTTGATGATCAAAATGGCAATAGCCAAGAAATATTGCTTAAAAATAAGAGCCAAC
ACTTACTCCTTGGTTTTGAACAACAAAGTAGCACAAGTTTGGAAAATTTACAAATGGATCAAAAAGTACCCAAAGCAATTAATGTTGAAGATGGCTGCAATAAGAGGGAG
CTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA
Protein sequenceShow/hide protein sequence
MNSITKTPYQMNKTHKEITIIMNIIHKNHKKVNNIHKEITKNERKIALKLEISHLEGKEEVERKEYGGRRKRRRNGWRTMVGANDFKTLVAGDEQRSKRWSIIAGRLPGR
TANDIKNYWNCHLSKKLNGQGVEKPKSKKEASIFAKQPKMKTFQEESSKLKGKAQVDDQNGNSQEILLKNKSQHLLLGFEQQSSTSLENLQMDQKVPKAINVEDGCNKRE
LWDDWISEMDLWIDSL