CuGenDBv2

Gene ID	Sed0006238
Organism	Sechium edule (Chayote v1)
Description	Coiled-coil domain-containing protein 86
Genome location	LG11:31231989..31233413
RNA-Seq Expression	Sed0006238
Synteny	Sed0006238
Gene Ontology terms	GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR005579 - Cgr1-like IPR026570 - Coiled-coil domain-containing protein 86

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143761.1 protein PXR1 [Cucumis sativus]

2.8e-78

86.91

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD  M+IDDS+ PPP+KRSA+PSS+N DKPTYGNP+YDGVI G+VSGR WKQ RKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]

3.9e-80

88.48

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Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD AM+IDDS+ PPP+KRSA+PSS+N DKPTYGNP+YDGVIAG+VSGR WKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

XP_022141739.1 protein PXR1 [Momordica charantia]

1.3e-80

89.58

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEAQNSL   DSENADA+M+ID+S PPP+KRSA+PSS+N DKPT+GNP+YDGVIAG+VSGR WKQPRKHRASAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDD+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

XP_022939634.1 protein PXR1 [Cucurbita moschata]

1.4e-77

86.32

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SL    SENADA+MD+D+S+ PP KRSA+PSS+N DKPT+GNP+YDGVIAG+VSGR WKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR+NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

XP_038874831.1 protein PXR1 [Benincasa hispida]

6.7e-80

87.89

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS+PPPSKRSA+PSS+N DKPT+ NP+YDGVIAG+VSGR WKQPRKHR SAMQVS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        RKGTTFEERE+QK IKAAFRERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNG5 Coiled-coil domain-containing protein 86

1.4e-78

86.91

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD  M+IDDS+ PPP+KRSA+PSS+N DKPTYGNP+YDGVI G+VSGR WKQ RKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

A0A1S3CP36 Coiled-coil domain-containing protein 86

1.9e-80

88.48

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD AM+IDDS+ PPP+KRSA+PSS+N DKPTYGNP+YDGVIAG+VSGR WKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

A0A5D3BKZ5 Coiled-coil domain-containing protein 86

1.9e-80

88.48

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD AM+IDDS+ PPP+KRSA+PSS+N DKPTYGNP+YDGVIAG+VSGR WKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSV-PPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

A0A6J1CIY7 Coiled-coil domain-containing protein 86

6.5e-81

89.58

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEAQNSL   DSENADA+M+ID+S PPP+KRSA+PSS+N DKPT+GNP+YDGVIAG+VSGR WKQPRKHRASAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIR NKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDD+IKK
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

A0A6J1JYC3 Coiled-coil domain-containing protein 86

6.8e-78

86.32

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SL    SENADA+MD+D+S+ PP KRSA+PSS+N DKPT+GNP+YDGVIAG+VSGR WKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR+NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+DYIKK
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31410.1 unknown protein

1.1e-51

62.5

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKP---TYGNPSYDGVIAGRVSGRNWKQPRKHRASAM
        MACT+DFR LDEGFGGKTYKRKRE  + +   A ++  +A+MDI D  PP +KRSAV SS+N DKP       P+YDGVIAG+VSGRNWKQPR HR+S  
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKP---TYGNPSYDGVIAGRVSGRNWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPDDYI
         V  +    EE ++Q+ IK A++ER  ELKE+IR+NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +PD+ +
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPDDYI

Sequences

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CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGGCGTGCACCATCGATTTCCGCCGCCTGGACGAAGGTTTCGGGGGGAAAACCTACAAGAGAAAGCGCGAAGAAGCTCAGAACAGCCTCACCACAGCCGATTCTGAGAA
TGCCGACGCCGCAATGGACATCGACGACTCGGTTCCGCCGCCATCCAAGCGATCCGCCGTTCCTTCGTCGGATAATCACGACAAACCGACCTACGGAAACCCTAGCTACG
ACGGCGTCATCGCTGGCAGGGTCTCCGGGCGGAACTGGAAGCAGCCGCGGAAGCACAGGGCGTCTGCGATGCAAGTGAGCCGCAAAGGCACGACGTTCGAGGAGAGGGAG
AAGCAGAAGATGATCAAGGCGGCGTTCAGGGAGCGGAAGGAGGAGTTGAAGGAGCAGATCAGGACGAACAAGGTGGAGAAGAGGAAGAAGAGGGAGGAGAGAGAGAAGAA
GAAGAAGGAAAACATTTTGAGATCTGGAACTAAGCTACAGAAAATCACTAACCCCAAGACATTGAAGAAGATTGCCAAATCCAAGCAGAAGAAGCTCCTCAAGGTGGTTC
CTGATGATTACATCAAGAAATAGGGTTTGCAGCCAAGTTCTCGAGTATTAAATTGTTGGGAAAATTGCAAGAACCACTCGTAGCAATCCTAAACTTTTATTTCGATCAAT
TACCCCCTAAATTTAATAATTATTGCAAATGGCCTTTTATAAAAAAAAAGAAAAAGAAAAAGAAAAGTGGTCTTCTTTCTCAATCTTCATGCTTTTAATCTCATCCTCCC
AAATTGATTTCCATAGATGTGAATCCAACAATGAGGTATTGATGAAGGTATAGGAGGAGAAAACTTTTATTATTAATCGCAATGTTATTCTTCCTTTCTTTCTTAAATTA
GACATAGG

Protein sequence

Show/hide protein sequence

MACTIDFRRLDEGFGGKTYKRKREEAQNSLTTADSENADAAMDIDDSVPPPSKRSAVPSSDNHDKPTYGNPSYDGVIAGRVSGRNWKQPRKHRASAMQVSRKGTTFEERE
KQKMIKAAFRERKEELKEQIRTNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPDDYIKK

Sed0006238 (gene) of Chayote v1 genome