; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006257 (gene) of Chayote v1 genome

Gene IDSed0006257
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:43702804..43703352
RNA-Seq ExpressionSed0006257
SyntenySed0006257
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034584.1 hypothetical protein E6C27_scaffold65G006000 [Cucumis melo var. makuwa]3.4e-1160.53Show/hide
Query:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
        MVR L D   GG      T  + V I WA  VSI +I+TVIFSC GG G KDKDTSH DT  G+ACAAGCG GCGA
Subjt:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
KAG6601275.1 hypothetical protein SDJN03_06508, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1872.6Show/hide
Query:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
        MVR LRD S  GGG   F     VLILWAA VSI +ISTVIFSC GGGPKDK +SH DTYG+ACAAGCGAGCG
Subjt:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
KGN52107.1 hypothetical protein Csa_007826 [Cucumis sativus]4.7e-1363.16Show/hide
Query:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
        MVR LRD   GG      T  + VLI WA  +SI +I+TVIFSC GG G KDKDTSH DTY G+ACAAGCG GCGA
Subjt:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
RXH70200.1 hypothetical protein DVH24_007456 [Malus domestica]2.8e-1055.84Show/hide
Query:  MVRELRDLSNGGGGAG-DFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDK-DTSHPDTYGSAC-AAGCGAGCGA
        MVR+ ++L +GGGG G    + +  ++LWAA  +  VIS +IFSCA G PKDK  T+  DTYGS C AAGCGAGCGA
Subjt:  MVRELRDLSNGGGGAG-DFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDK-DTSHPDTYGSAC-AAGCGAGCGA
TXG57316.1 hypothetical protein EZV62_018629 [Acer yangbiense]3.7e-1050Show/hide
Query:  MVRELRDL---SNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
        M RE +++    NGGGG      G+ VL+ WAA   + +IS ++FSCAGG  KDKD++  D YG+ CAAGCGA CG
Subjt:  MVRELRDL---SNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
TrEMBL top hitse value%identityAlignment
A0A0A0KUK0 Uncharacterized protein2.3e-1363.16Show/hide
Query:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
        MVR LRD   GG      T  + VLI WA  +SI +I+TVIFSC GG G KDKDTSH DTY G+ACAAGCG GCGA
Subjt:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
A0A498HHJ6 Uncharacterized protein1.4e-1055.84Show/hide
Query:  MVRELRDLSNGGGGAG-DFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDK-DTSHPDTYGSAC-AAGCGAGCGA
        MVR+ ++L +GGGG G    + +  ++LWAA  +  VIS +IFSCA G PKDK  T+  DTYGS C AAGCGAGCGA
Subjt:  MVRELRDLSNGGGGAG-DFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDK-DTSHPDTYGSAC-AAGCGAGCGA
A0A540LKM5 Uncharacterized protein1.8e-1055.84Show/hide
Query:  MVRELRDLSNGGGGAG-DFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDK-DTSHPDTYGSAC-AAGCGAGCGA
        MVR+ ++L  GGGG G    + +  ++LWAA  +  VIS +IFSCA G PKDK  T+  DTYGS C AAGCGAGCGA
Subjt:  MVRELRDLSNGGGGAG-DFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDK-DTSHPDTYGSAC-AAGCGAGCGA
A0A5C7HLZ3 Uncharacterized protein1.8e-1050Show/hide
Query:  MVRELRDL---SNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
        M RE +++    NGGGG      G+ VL+ WAA   + +IS ++FSCAGG  KDKD++  D YG+ CAAGCGA CG
Subjt:  MVRELRDL---SNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
A0A5D3CFJ4 Uncharacterized protein1.6e-1160.53Show/hide
Query:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
        MVR L D   GG      T  + V I WA  VSI +I+TVIFSC GG G KDKDTSH DT  G+ACAAGCG GCGA
Subjt:  MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGG-GPKDKDTSHPDTY-GSACAAGCGAGCGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68238.1 unknown protein7.7e-0649.06Show/hide
Query:  GTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG
        G   L +WAA V+  VI+ VIFSC+      K  ++ D  GS+CAAGCG GCG
Subjt:  GTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGGAATTAAGAGATTTAAGCAACGGCGGCGGCGGAGCCGGCGATTTCACCACCGGCACGGCGGTTCTGATATTATGGGCGGCGGCGGTTTCAATCTTTGTAAT
TTCAACGGTCATATTCTCCTGCGCCGGCGGCGGCCCGAAAGATAAGGACACGTCACACCCCGACACTTACGGCTCGGCTTGCGCAGCCGGCTGCGGCGCTGGCTGCGGCG
CTTGA
mRNA sequenceShow/hide mRNA sequence
CTAATCCAATCCCTTGAAATTACAGAGAAAAACTATAATTTTTTAGATGGTGAGGGAATTAAGAGATTTAAGCAACGGCGGCGGCGGAGCCGGCGATTTCACCACCGGCA
CGGCGGTTCTGATATTATGGGCGGCGGCGGTTTCAATCTTTGTAATTTCAACGGTCATATTCTCCTGCGCCGGCGGCGGCCCGAAAGATAAGGACACGTCACACCCCGAC
ACTTACGGCTCGGCTTGCGCAGCCGGCTGCGGCGCTGGCTGCGGCGCTTGATCTCTCCCGCCGCTGCTTAATTAAAAGACGGCGGCGCGTGACTTTTCCGCTCACCGGAA
CACGGTTACTTGTAATCTTTTATTTCTTTTTGTTCTTTTTTTGGGTTTTTAATTTGCTTCTTTAAAATATGTAAAGCAAATTAATATACTCATGAAAATGGTGGAAAAGA
ATTACGTGGCTTCTCGAATTGGCCACGTCATGTTCCTTTGCTGAAATGATTTTCATGTCCAATTTGTTATATTTTTAGATTAAACTTTATAATTTAGGGGATTTTCCGG
Protein sequenceShow/hide protein sequence
MVRELRDLSNGGGGAGDFTTGTAVLILWAAAVSIFVISTVIFSCAGGGPKDKDTSHPDTYGSACAAGCGAGCGA