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Sed0006259 (gene) of Chayote v1 genome

Gene IDSed0006259
OrganismSechium edule (Chayote v1)
DescriptionCalcium-transporting ATPase 9, plasma membrane-type-like protein
Genome locationLG02:45989241..45990181
RNA-Seq ExpressionSed0006259
SyntenySed0006259
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053852.1 hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]5.2e-1657.61Show/hide
Query:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFD-YPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA
        M +K+    +LFL F FL+SS+   AVPTTR+LK  F+ +P  Q  + +D RDL+I  GDSFE     R++LENNDYPGTGANNHHDPKSPA
Subjt:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFD-YPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA

KAG6580910.1 hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]9.8e-2372.37Show/hide
Query:  LLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPKSPA
        LL+LFLGF  L+SS AVPTTR+ K  FD P AQDF+FQD RDL+ +GGD F R VLENNDYPGTGANNHHDP +PA
Subjt:  LLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPKSPA

KAG6596972.1 hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2270.11Show/hide
Query:  LVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFE---------RMVLENNDYPGTGANNHHDPKSPAAKP
        L+LFL F FLISSTAVPTTR+L+ NFD P AQ  +FQD RDL+ISG DS E         R+VLENNDYPGTGANNHHDPKSPA KP
Subjt:  LVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFE---------RMVLENNDYPGTGANNHHDPKSPAAKP

KAG7017658.1 hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2372.37Show/hide
Query:  LLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPKSPA
        LL+LFLGF  L+SS AVPTTR+ K  FD P AQDF+FQD RDL+ +GGD F R+VLENNDYPGTGANNHHDP +PA
Subjt:  LLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPKSPA

KGN59481.1 hypothetical protein Csa_001422 [Cucumis sativus]7.3e-1859.34Show/hide
Query:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA
        M +K+    +LFL F FL+SS    AVPTTR+LK  FD+P  Q  + QD RD++I  GDSFE     R++LENNDYPGTGANNHHDPKSPA
Subjt:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA

TrEMBL top hitse value%identityAlignment
A0A0A0LHJ0 Uncharacterized protein3.5e-1859.34Show/hide
Query:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA
        M +K+    +LFL F FL+SS    AVPTTR+LK  FD+P  Q  + QD RD++I  GDSFE     R++LENNDYPGTGANNHHDPKSPA
Subjt:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA

A0A2R6Q481 Protein Rev like1.7e-1255.42Show/hide
Query:  LLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDAR-----DLKISGGDSFE---RMVLENNDYPGTGANNHHDPKSP
        LLVLFLGF F++SS AVPT+R LK   D P  QD +  D       D ++S  + F    RM LENNDYPGTGANNHHDP +P
Subjt:  LLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDAR-----DLKISGGDSFE---RMVLENNDYPGTGANNHHDPKSP

A0A5A7UDI6 Uncharacterized protein2.5e-1657.61Show/hide
Query:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFD-YPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA
        M +K+    +LFL F FL+SS+   AVPTTR+LK  F+ +P  Q  + +D RDL+I  GDSFE     R++LENNDYPGTGANNHHDPKSPA
Subjt:  MAKKVH-LLVLFLGFFFLISST---AVPTTRLLKPNFD-YPFAQDFIFQDARDLKISGGDSFE-----RMVLENNDYPGTGANNHHDPKSPA

A0A5B6ZB32 Uncharacterized protein (Fragment)7.6e-1353.66Show/hide
Query:  VHLLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMV-----LENNDYPGTGANNHHDPKSP
        + LLVLFLGF+F++SS AVPT+R LK     P AQD   Q   D++  G    ER +     +E+NDYPGTGANNHHDPK+P
Subjt:  VHLLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMV-----LENNDYPGTGANNHHDPKSP

A0A6A6KJS2 Uncharacterized protein1.3e-1255.81Show/hide
Query:  VHLLVLFLGFFFLISSTAVPTTRLLKPNFDYPFA-QDFIFQDARDLK--------ISGGDSFERMVLENNDYPGTGANNHHDPKSP
        V LL+LFLGF F++SS AVP+TR LK   + P + QDF+ QDA DL         +  G    RM LEN DYPGTGANNHHDPK+P
Subjt:  VHLLVLFLGFFFLISSTAVPTTRLLKPNFDYPFA-QDFIFQDARDLK--------ISGGDSFERMVLENNDYPGTGANNHHDPKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47510.1 unknown protein2.9e-0437.65Show/hide
Query:  MAKK--VHLLVLFL----GFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPK
        MA K  +HLLV+F       FF  S  +   + + KP    P  QD +    ++++       ERMV+E NDYPG+GANN H P+
Subjt:  MAKK--VHLLVLFL----GFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGAAAGTTCACCTCTTGGTTCTGTTTCTGGGTTTCTTCTTTCTCATTTCTTCCACTGCTGTTCCCACCACAAGACTCCTCAAACCAAACTTTGATTACCCATT
TGCCCAAGATTTCATTTTTCAGGATGCAAGAGATTTGAAGATAAGCGGTGGAGATTCATTTGAAAGAATGGTTTTGGAGAACAATGATTATCCTGGCACAGGAGCCAACA
ATCACCATGATCCAAAATCTCCTGCTGCAAAACCATAG
mRNA sequenceShow/hide mRNA sequence
TTTTTCTGAATTTTTTATGTTTATATAAATCATCTCTTACATGGGTTTTTCTTGCAAAACTACAACCCTTAATTCCCCCTTATTTTCTGTTTGTTTCCTGAGAAAACATG
GCTAAGAAAGTTCACCTCTTGGTTCTGTTTCTGGGTTTCTTCTTTCTCATTTCTTCCACTGCTGTTCCCACCACAAGACTCCTCAAACCAAACTTTGATTACCCATTTGC
CCAAGATTTCATTTTTCAGGATGCAAGAGATTTGAAGATAAGCGGTGGAGATTCATTTGAAAGAATGGTTTTGGAGAACAATGATTATCCTGGCACAGGAGCCAACAATC
ACCATGATCCAAAATCTCCTGCTGCAAAACCATAGTGTTTTTTAATGTTAAATATATGTATGCATTTTGAATCTTAACCAAATTTTAGAAATAAAGAGGTTAATTTTTAA
AAGTTATTCCTTTTGCTTCTATAAATTTGGGTAAGGTTTCAAAGAATTGAAACATAATTGTTATGGTGATGGTTTGTAGACATAAAAAAGGTAAGAAGTTTATTAGAAAA
ATTGAAGGAAAAAAAGCAAAGCAAAGGGTAATTCTGTCTTTTAATCGGTTGCTTTAAATCTTCTAATGAATGAGTGGAATAGTTTACTTTTGTGCACAAAACATTAGTAT
TTGTTTGGACTTTTCCTTTGTAATGTATACAAGATTATTGGCTTAACACTATTGTATATTCAATTATCACAAGTTGTTCTTGTTCA
Protein sequenceShow/hide protein sequence
MAKKVHLLVLFLGFFFLISSTAVPTTRLLKPNFDYPFAQDFIFQDARDLKISGGDSFERMVLENNDYPGTGANNHHDPKSPAAKP