CuGenDBv2

Gene ID	Sed0006260
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog 8A
Genome location	LG07:40597429..40603853
RNA-Seq Expression	Sed0006260
Synteny	Sed0006260
Gene Ontology terms	GO:0006904 - vesicle docking involved in exocytosis (biological process) GO:0009306 - protein secretion (biological process) GO:0017157 - regulation of exocytosis (biological process) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR005225 - Small GTP-binding protein domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600049.1 Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia]

9.8e-112

96.3

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Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSI RDIKQRL+DTDSK+EPQTIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
          GDGQA QKS CCGS
Subjt:  AAGDGQATQKSACCGS

XP_004147688.1 ras-related protein RABE1c [Cucumis sativus]

1.8e-113

98.15

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQRLADTDSKAEPQTIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

XP_022139146.1 ras-related protein RABE1c-like [Momordica charantia]

5.8e-112

96.76

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI+LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEY IKFFETSAKTN+NVEEVFFSI RDIKQRLADTDSKAEPQTIKIN PD 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

XP_022943018.1 ras-related protein RABE1c-like [Cucurbita moschata]

9.8e-112

96.3

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSI RDIKQRL+DTDSK+EPQTIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
          GDGQA QKS CCGS
Subjt:  AAGDGQATQKSACCGS

XP_024965444.1 ras-related protein RABE1c [Cynara cardunculus var. scolymus]

9.8e-112

95.83

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVE+VFFSI +DIKQRL+DTDSKAEP TIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQ TQKSACCGS
Subjt:  AAGDGQATQKSACCGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLV7 Uncharacterized protein

8.7e-114

98.15

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQRLADTDSKAEPQTIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

A0A1S3CGK2 ras-related protein RABE1c-like

8.7e-114

98.15

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQRLADTDSKAEPQTIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

A0A5A7U9Z4 Ras-related protein RABE1c-like

8.7e-114

98.15

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Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQRLADTDSKAEPQTIKIN PDA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

A0A5B6YZW1 Putative ras-related protein RABE1c

3.6e-112

97.22

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Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTI+IN PD 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAG  QA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

A0A6J1CBT2 ras-related protein RABE1c-like

2.8e-112

96.76

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI+LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEY IKFFETSAKTN+NVEEVFFSI RDIKQRLADTDSKAEPQTIKIN PD 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAGDGQA QKSACCGS
Subjt:  AAGDGQATQKSACCGS

SwissProt top hits

e value

%identity

Alignment

O24466 Ras-related protein RABE1a

1.9e-110

93.06

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTN+NVEEVFFSI +DIKQRLADTD++AEPQTIKIN  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
         AG  QATQKSACCG+
Subjt:  AAGDGQATQKSACCGS

P28186 Ras-related protein RABE1c

1.6e-112

94.91

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQRL+DTDS+AEP TIKI+  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAG GQATQKSACCG+
Subjt:  AAGDGQATQKSACCGS

Q39433 Ras-related protein RAB1BV

1.7e-103

89.81

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQRLAD+D++ E Q      P  
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
         +G+ QA  KSACCGS
Subjt:  AAGDGQATQKSACCGS

Q9LZD4 Ras-related protein RABE1d

6.2e-101

86.92

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVE VF SI +DIKQRL +TD+KAEPQ IKI   D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACC
        AA    A +KSACC
Subjt:  AAGDGQATQKSACC

Q9SF91 Ras-related protein RABE1e

9.0e-100

85.58

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNW++NIEQHASD+VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SI +DIKQRL ++D+KAEPQ IKI   DA
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  -AAGDGQATQKSACC
          A      +KSACC
Subjt:  -AAGDGQATQKSACC

Arabidopsis top hits

e value

%identity

Alignment

AT3G46060.1 RAB GTPase homolog 8A

1.1e-113

94.91

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQRL+DTDS+AEP TIKI+  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAG GQATQKSACCG+
Subjt:  AAGDGQATQKSACCGS

AT3G46060.2 RAB GTPase homolog 8A

1.1e-113

94.91

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQRL+DTDS+AEP TIKI+  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAG GQATQKSACCG+
Subjt:  AAGDGQATQKSACCGS

AT3G46060.3 RAB GTPase homolog 8A

1.1e-113

94.91

Show/hide

Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQRL+DTDS+AEP TIKI+  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAG GQATQKSACCG+
Subjt:  AAGDGQATQKSACCGS

AT3G53610.1 RAB GTPase homolog 8

1.4e-111

93.06

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Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTN+NVEEVFFSI +DIKQRLADTD++AEPQTIKIN  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
         AG  QATQKSACCG+
Subjt:  AAGDGQATQKSACCGS

AT5G59840.1 Ras-related small GTP-binding family protein

5.6e-113

94.91

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Query:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
        MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE
Subjt:  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE

Query:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA
        SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTN+NVEEVFFSI +DIKQRLADTDS+AEP TIKI+  D 
Subjt:  SSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDA

Query:  AAGDGQATQKSACCGS
        AAG GQATQKSACCGS
Subjt:  AAGDGQATQKSACCGS

Sequences

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CDS sequence

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ATGGCTGCACCACCGGCTAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGA
TGGTTCTTTCACAACCAGTTTTATCACCACAATTGGTATTGATTTTAAGATAAGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACTGCTGGTC
AAGAGCGTTTCCGGACTATCACAACAGCTTACTATCGAGGAGCCATGGGAATTCTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAATAACATTAGGAATTGGATT
CGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGCTGTGCCTACTTCTAAAGGTCAAGCCCT
TGCTGATGAGTATGGAATCAAATTCTTTGAAACCAGTGCAAAGACAAACATGAATGTCGAGGAAGTTTTCTTTTCGATTGGAAGGGACATTAAGCAAAGGCTTGCAGACA
CCGATTCGAAGGCAGAGCCTCAAACAATCAAAATAAACAATCCAGACGCAGCAGCAGGAGATGGTCAAGCCACTCAAAAGTCAGCTTGCTGTGGCTCGTAA

mRNA sequence

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CTTAATTAAAGAAAATAAACAAATAAAATATTTTAAAAAAAAATGAACGAAGCAAGTATCAAGTGTAGCCAAGCGTAGGATAAGAAACAGTGGCCCATTTGTATACAAAC
GTTTTGGCGCAGTCGATCGGTCCCAATCGGCCAATCTCCGCGCAAAATCATTGAGAATCGGTTTTCATTTCTCTCTTTTTCTCTCCGTTCGATGTCGCCGACGACTTGCT
AAGCTTCATTAAGGGAATCCAATTTCGTTGAAAGATTCTGGAAATCGATGGCTGCACCACCGGCTAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATT
GGCGATAGCGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGTATTGATTTTAAGATAAGAACCATTGA
GCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACTGCTGGTCAAGAGCGTTTCCGGACTATCACAACAGCTTACTATCGAGGAGCCATGGGAATTCTGCTGGTTT
ATGATGTCACTGACGAGTCATCTTTCAATAACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGAT
ATGGATGAAAGTAAAAGGGCTGTGCCTACTTCTAAAGGTCAAGCCCTTGCTGATGAGTATGGAATCAAATTCTTTGAAACCAGTGCAAAGACAAACATGAATGTCGAGGA
AGTTTTCTTTTCGATTGGAAGGGACATTAAGCAAAGGCTTGCAGACACCGATTCGAAGGCAGAGCCTCAAACAATCAAAATAAACAATCCAGACGCAGCAGCAGGAGATG
GTCAAGCCACTCAAAAGTCAGCTTGCTGTGGCTCGTAAAGTCGTAGCAGAAGATCGAACCAAGCGAAAAACGCCCTTTATATCGTGGTGGTACCTTCTGGGAACAAAATC
AAAGCCTGGTAAGATTGTGGTAGGCTTGTTCATCAATTCCGGTCGTCATCGCCACTGTGAATCATCATCAGTTGTGTGTTGAATGATTGTTTTTGTTTCTCTATTTTGGC
AAAAGACAGTGATATTTTCCCTTTTCTTCTAATTTTTATGTATTGGAGGTTGGGATTTAGGACTCCTCAATTATTTTACAAGTGGGTTGGTGTAGATAGATAAATCAGGA
AAATATTGTGAAGCATTTTCTTCCTTTAGGAGCAACGAAGAATGGTGGTCTCTGTATTGGTTGCTTTGTTACTCTCATCTTACTGCCCGACTCTAATTGGAATTATTGAA
TGTTGTTAACTCTGGATGCAATTAATTTAGTTTGGAATGTCATTTGAGTTCAAACATATGACCTTTTGGTCGAGAATGTCTTAATTAGTTGAATTATATTCA

Protein sequence

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MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWI
RNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS

Sed0006260 (gene) of Chayote v1 genome