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Sed0006284 (gene) of Chayote v1 genome

Gene IDSed0006284
OrganismSechium edule (Chayote v1)
DescriptionRPM1-interacting protein 4
Genome locationLG05:40859770..40861779
RNA-Seq ExpressionSed0006284
SyntenySed0006284
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140725.1 RPM1-interacting protein 4 [Momordica charantia]5.4e-3393.33Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YK+GA LGK Q+KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

XP_022943908.1 RPM1-interacting protein 4-like [Cucurbita moschata]3.5e-3290.67Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP+YKNG+ LGK Q KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

XP_022947539.1 uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata]1.1e-3396Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYK+GA LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

XP_022947540.1 uncharacterized protein LOC111451376 isoform X2 [Cucurbita moschata]4.1e-3394.67Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYK+GA LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

XP_038902743.1 protein NOI4 [Benincasa hispida]2.4e-3393.33Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKDDP+YKNG+ LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

TrEMBL top hitse value%identityAlignment
A0A6J1CFY0 RPM1-interacting protein 42.6e-3393.33Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YK+GA LGK Q+KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

A0A6J1G736 uncharacterized protein LOC111451376 isoform X15.3e-3496Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYK+GA LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

A0A6J1G769 uncharacterized protein LOC111451376 isoform X22.0e-3394.67Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYK+GA LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

A0A6J1I4X6 uncharacterized protein LOC111469905 isoform X22.0e-3394.67Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYK+GA LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

A0A6J1I7R1 uncharacterized protein LOC111469905 isoform X15.3e-3496Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYK+GA LGKSQ KKWFCCLQAA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA

SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.2e-2168.42Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQA
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    + K+G G   K Q KKW CC+QA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQA

Q8GYN5 RPM1-interacting protein 41.3e-0559.38Show/hide
Query:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Subjt:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.2e-2467.57Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQA
        MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y     + +   KKWFCC++A
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQA

AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein6.0e-1454.29Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFC
        MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +KKTG      +   PS +   G+    TKKW C
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFC

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.2e-1762.34Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQAA
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    + K+G G   K Q  K    L A+
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQAA

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.4e-1765.22Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQAA
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    + K+G G   K Q  K    L A+
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQAA

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein6.0e-2272.06Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQA
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    + K+G G   K Q KKW CC+QA
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KNGAG-LGKSQTKKWFCCLQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAAAAGGCAGCAGTAGTCCCTTGCCAAAGTTCGGCGAATGGGATGTCAACGATCCCGCATCTGCCGAGGGATTCACGGTCATCTTTAATAAAGCCAGGAACGA
GAAAAAGACTGGCGGCTTGCCTGACTCTCCTGCAAAGGATGACCCTTCATACAAGAATGGGGCTGGTCTTGGAAAGTCTCAGACTAAAAAATGGTTTTGCTGCTTGCAAG
CTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAAAAGGCAGCAGTAGTCCCTTGCCAAAGTTCGGCGAATGGGATGTCAACGATCCCGCATCTGCCGAGGGATTCACGGTCATCTTTAATAAAGCCAGGAACGA
GAAAAAGACTGGCGGCTTGCCTGACTCTCCTGCAAAGGATGACCCTTCATACAAGAATGGGGCTGGTCTTGGAAAGTCTCAGACTAAAAAATGGTTTTGCTGCTTGCAAG
CTGCGTAG
Protein sequenceShow/hide protein sequence
MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKNGAGLGKSQTKKWFCCLQAA