CuGenDBv2

Gene ID	Sed0006289
Organism	Sechium edule (Chayote v1)
Description	ATPase, vacuolar ER assembly factor, Vma
Genome location	LG01:70053125..70056399
RNA-Seq Expression	Sed0006289
Synteny	Sed0006289
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021013 - ATPase, vacuolar ER assembly factor, Vma12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131249.1 uncharacterized protein LOC111004507 [Momordica charantia]

1.7e-82

82.04

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Query:  MMISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKL
        MM +++THPSGLV+S TEAIRSFL SAS D+RLSE+LRQI+ DLSSQDNV Y+PLRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KL
Subjt:  MMISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKL

Query:  ADVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSSSRS
         D+AERKAYQELVKDIAP K + EPFSSYKDQLGFGLHV LIMFTGYL+GYALFRALFR DPVMS AGGILGLVFGMLVETLLFIIRSSNYD +SSSS S
Subjt:  ADVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSSSRS

Query:  KLKKSQ
        K+KKSQ
Subjt:  KLKKSQ

XP_022959366.1 uncharacterized protein LOC111460360 [Cucurbita moschata]

5.3e-84

83.01

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++Q HPSGLV+++TEAIRSFLTSASID R+SEELRQ+A +L+SQDNV Y+PLRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KLA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYL+GYALFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIR+S+YD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_023006665.1 uncharacterized protein LOC111499322 [Cucurbita maxima]

2.9e-82

81.55

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++Q HPSGLV+++TEAIR+FLTSASID R+SEELRQ+A +L+SQDNV Y+PLRAIW A ESS RPDLL LL GS FV  SPKPREKSEELKARL  LA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYL+GY LFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIR+S+YD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_023548168.1 uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]

4.1e-84

83.5

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++Q HPSGLV+++TEAIRSFLTSASID R+SEELRQ+A +L+SQDNV Y+PLRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KLA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KPV EPFSSYKDQLGFGLHV LIMFTGYL+GYALFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIR+S+YD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_038876067.1 uncharacterized protein LOC120068388 [Benincasa hispida]

1.3e-85

85.44

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++ THPSGLVLSNTEAIRSFLTSASID +LS+ELRQIA DL+SQ N+ Y+PLRAIW A ESS RPDLL LL+GS FVL SPKPREKSEELKARL KLA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYL+GYALFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIRSSNYD + SSSS S
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C6X8 uncharacterized protein LOC103497719

1.8e-82

83.98

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++   PSGLVLS+TEAIRSFLTSASID +LS+ELRQIA DL+SQ N+ Y+ LRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KLA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYLLGYALFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIRSSNYD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A5D3BV73 Uncharacterized protein

1.8e-82

83.98

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++   PSGLVLS+TEAIRSFLTSASID +LS+ELRQIA DL+SQ N+ Y+ LRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KLA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYLLGYALFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIRSSNYD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A6J1BP66 uncharacterized protein LOC111004507

8.3e-83

82.04

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Query:  MMISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKL
        MM +++THPSGLV+S TEAIRSFL SAS D+RLSE+LRQI+ DLSSQDNV Y+PLRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KL
Subjt:  MMISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKL

Query:  ADVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSSSRS
         D+AERKAYQELVKDIAP K + EPFSSYKDQLGFGLHV LIMFTGYL+GYALFRALFR DPVMS AGGILGLVFGMLVETLLFIIRSSNYD +SSSS S
Subjt:  ADVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSSSRS

Query:  KLKKSQ
        K+KKSQ
Subjt:  KLKKSQ

A0A6J1H4N6 uncharacterized protein LOC111460360

2.6e-84

83.01

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++Q HPSGLV+++TEAIRSFLTSASID R+SEELRQ+A +L+SQDNV Y+PLRAIW A ESS RPDLL LL+GS FV  SPKPREKSEELKARL KLA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYL+GYALFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIR+S+YD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

A0A6J1L0S3 uncharacterized protein LOC111499322

1.4e-82

81.55

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Query:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA
        MI++Q HPSGLV+++TEAIR+FLTSASID R+SEELRQ+A +L+SQDNV Y+PLRAIW A ESS RPDLL LL GS FV  SPKPREKSEELKARL  LA
Subjt:  MISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLA

Query:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS
        DVAERKAYQELVKDIAP+KP+ EPFSSYKDQLGFGLHV LIMFTGYL+GY LFRALFRHDP+MSAAGGILGLVFGMLVETLLFIIR+S+YD + SSSSRS
Subjt:  DVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYD-QQSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52980.1 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

1.9e-63

69.15

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Query:  SGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLADVAERKAY
        SGL+LS TE +RSFL  AS D RLS+ELR IA DL S++ + Y+ LRAIW+  + S RPDLL L SGS FV  SPKPREKSEELK RL KL ++AERK Y
Subjt:  SGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKSEELKARLAKLADVAERKAY

Query:  QELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSS
         ELVKDI P+K V EPFSSYKDQLGFGLHV L MFTGYL+GYA FRALF  +P +SAAGGILGLV  MLVETLLFII++S  DQ  SS
Subjt:  QELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATTTGGATCTTGTGAGCTCAGGGTATCATTGTTCTCAAATCTCAAAAACAAATTCCATGATGATCAGCAACCAGACACATCCGTCTGGTCTCGTTTTATCCAACAC
CGAAGCAATTCGCTCATTTCTGACTTCGGCGTCCATTGACGTGCGACTTTCCGAGGAACTCCGGCAGATTGCCTTGGATCTCTCTTCACAAGACAACGTTACATATAGGC
CGCTTAGAGCTATCTGGTCTGCTTTGGAATCGTCCGACCGGCCGGACTTGCTCTCTCTTTTATCCGGATCGGGGTTCGTCCTTGCAAGCCCTAAACCGAGGGAAAAGAGT
GAGGAGTTAAAGGCGAGACTGGCGAAGCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAGCTGGTGAAGGACATTGCTCCTGAAAAACCAGTTGTTGAGCCTTTCTC
TTCCTATAAGGATCAACTCGGATTCGGTTTACATGTCGCATTGATCATGTTTACTGGCTATCTTCTCGGATATGCTTTGTTCCGAGCATTGTTTAGGCACGATCCAGTCA
TGAGTGCTGCTGGAGGCATCCTCGGATTGGTATTCGGCATGCTTGTCGAAACACTTCTTTTCATTATTAGATCTTCAAATTATGATCAACAATCTTCATCCTCCCGTTCT
AAGCTAAAGAAGAGTCAATAG

mRNA sequence

Show/hide mRNA sequence

ATAATATTTCCTATGTAAACAAGGAATTGGTAAGAAAAAACAAAATGAACCCTAGATTCTCCAACTAAAGTTAACGAAATAGCTTTCTTCTCCGTTGCGTTCAAGCCTTT
TTTCTAAGAAGGTGGAGCTCCGACGAGGTAACGACCACCGGAATTCGTTGCTCCGATCGAAGACATAGCTGAAGTTTCTTCACCTCGGCGTGCATCAGAGCAAGGACGAG
CAGTTTCCGGCCACTCACGGCGTTTTCCGATGTCAAAGCTAGACGGCGGGATTTGAACGTGCACCGGCGATCCGGTAACTCAGAAAGTAGGAACACATGTGTCTGTGTCT
GTTAATTCAGCGAGATTAGCAGATCCGGCAATTTGGTGGTCAGTTCATTGTTTTTCGGCGATTTAGGGTTTAGGTCCCAATTCAAACCAATCGAGATTCAAGGAGTATTG
GACTTTGATGAATTTGGATCTTGTGAGCTCAGGGTATCATTGTTCTCAAATCTCAAAAACAAATTCCATGATGATCAGCAACCAGACACATCCGTCTGGTCTCGTTTTAT
CCAACACCGAAGCAATTCGCTCATTTCTGACTTCGGCGTCCATTGACGTGCGACTTTCCGAGGAACTCCGGCAGATTGCCTTGGATCTCTCTTCACAAGACAACGTTACA
TATAGGCCGCTTAGAGCTATCTGGTCTGCTTTGGAATCGTCCGACCGGCCGGACTTGCTCTCTCTTTTATCCGGATCGGGGTTCGTCCTTGCAAGCCCTAAACCGAGGGA
AAAGAGTGAGGAGTTAAAGGCGAGACTGGCGAAGCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAGCTGGTGAAGGACATTGCTCCTGAAAAACCAGTTGTTGAGC
CTTTCTCTTCCTATAAGGATCAACTCGGATTCGGTTTACATGTCGCATTGATCATGTTTACTGGCTATCTTCTCGGATATGCTTTGTTCCGAGCATTGTTTAGGCACGAT
CCAGTCATGAGTGCTGCTGGAGGCATCCTCGGATTGGTATTCGGCATGCTTGTCGAAACACTTCTTTTCATTATTAGATCTTCAAATTATGATCAACAATCTTCATCCTC
CCGTTCTAAGCTAAAGAAGAGTCAATAGAGTTACTTCTTTCGAGATTTGCAGTTCTTTCTACTCTATTTGAATACATTAAGTTAACTTTTGCTCAATGTTGTAGATTCAA
TCGTGTAATAAGGCCCTTGTGACGAGCTAGTTGCAATTTATTGTTTGAAAACTTGATTTTGGGCTATAAAACTTTATACATATGTTTGTATAGTTTGGCAACATTACTCC
CCAAATTTTACGATTCTGTATAGTTTAGTATATTGTTACATTAATTTTTGTAGTCTATAGCATTATCTTCTCAGAAATTAATAGCTGAGCCGTGG

Protein sequence

Show/hide protein sequence

MNLDLVSSGYHCSQISKTNSMMISNQTHPSGLVLSNTEAIRSFLTSASIDVRLSEELRQIALDLSSQDNVTYRPLRAIWSALESSDRPDLLSLLSGSGFVLASPKPREKS
EELKARLAKLADVAERKAYQELVKDIAPEKPVVEPFSSYKDQLGFGLHVALIMFTGYLLGYALFRALFRHDPVMSAAGGILGLVFGMLVETLLFIIRSSNYDQQSSSSRS
KLKKSQ

Sed0006289 (gene) of Chayote v1 genome