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Sed0006301 (gene) of Chayote v1 genome

Gene IDSed0006301
OrganismSechium edule (Chayote v1)
DescriptionEC metallothionein-like protein
Genome locationLG05:40624401..40624837
RNA-Seq ExpressionSed0006301
SyntenySed0006301
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000316 - Plant EC metallothionein-like protein, family 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448405.1 PREDICTED: metallothionein-like protein 4A [Cucumis melo]1.7e-2465.91Show/hide
Query:  MAETGG--GGGGVRGCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GG  G GGV  CNQ+CGCAVPCPGG  C+C+T   AGGE   + RC CGEHC CNPCTCP    GVGK NCRCG +CRCE C C
Subjt:  MAETGG--GGGGVRGCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

XP_022140669.1 metallothionein-like protein 4A [Momordica charantia]1.5e-2871.26Show/hide
Query:  MAETG--GGGGGVRGCNQTCGCAVPCPGGRVCKCATA----GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESC
        MAE G  GGGGG+R CNQ+CGCAVPCPGG  C+CATA     G + AHR C CGEHCGCNPCTCPSAV GVGK+ C+CG+NCRCE+C
Subjt:  MAETG--GGGGGVRGCNQTCGCAVPCPGGRVCKCATA----GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESC

XP_022944284.1 metallothionein-like protein 4A [Cucurbita moschata]1.8e-2975.29Show/hide
Query:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GGG  GG+R CNQ+CGCAVPCPGG  CKCATA  G EVAHR+C CGEHCGC+PCTCPSAV GVGK +CRCG++CRCE C C
Subjt:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

XP_022985832.1 metallothionein-like protein 4B [Cucurbita maxima]2.3e-2975.29Show/hide
Query:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GGG  GG+R CNQ CGCAVPCPGG  CKCATA  G EVAHR+C CGEHCGC+PCTCPSAV GVGK +CRCG++CRCE C C
Subjt:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

XP_023513130.1 metallothionein-like protein 4A [Cucurbita pepo subsp. pepo]8.1e-3074.42Show/hide
Query:  MAETGGGG--GGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GGGG  GG+R CNQ+CGCAVPCPGG  CKCATA  G EVAHR+C CGEHCGC+PCTCPSAV GVG+  CRCG++CRCE C C
Subjt:  MAETGGGG--GGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

TrEMBL top hitse value%identityAlignment
A0A1S3BJL5 metallothionein-like protein 4A8.4e-2565.91Show/hide
Query:  MAETGG--GGGGVRGCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GG  G GGV  CNQ+CGCAVPCPGG  C+C+T   AGGE   + RC CGEHC CNPCTCP    GVGK NCRCG +CRCE C C
Subjt:  MAETGG--GGGGVRGCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

A0A5D3CS48 Metallothionein-like protein 4A8.4e-2565.91Show/hide
Query:  MAETGG--GGGGVRGCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GG  G GGV  CNQ+CGCAVPCPGG  C+C+T   AGGE   + RC CGEHC CNPCTCP    GVGK NCRCG +CRCE C C
Subjt:  MAETGG--GGGGVRGCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

A0A6J1CGB3 metallothionein-like protein 4A7.4e-2971.26Show/hide
Query:  MAETG--GGGGGVRGCNQTCGCAVPCPGGRVCKCATA----GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESC
        MAE G  GGGGG+R CNQ+CGCAVPCPGG  C+CATA     G + AHR C CGEHCGCNPCTCPSAV GVGK+ C+CG+NCRCE+C
Subjt:  MAETG--GGGGGVRGCNQTCGCAVPCPGGRVCKCATA----GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESC

A0A6J1FWF6 metallothionein-like protein 4A8.7e-3075.29Show/hide
Query:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GGG  GG+R CNQ+CGCAVPCPGG  CKCATA  G EVAHR+C CGEHCGC+PCTCPSAV GVGK +CRCG++CRCE C C
Subjt:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

A0A6J1J5Z9 metallothionein-like protein 4B1.1e-2975.29Show/hide
Query:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC
        MAE GGG  GG+R CNQ CGCAVPCPGG  CKCATA  G EVAHR+C CGEHCGC+PCTCPSAV GVGK +CRCG++CRCE C C
Subjt:  MAETGGG-GGGVRGCNQTCGCAVPCPGGRVCKCATA-GGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC

SwissProt top hitse value%identityAlignment
P30570 EC protein III4.0e-1653.33Show/hide
Query:  GCNQTCGCAVPCPGGRVCKCATAGGEEVA--HRRCSCGEHCGCNPCTCPSAVTGVG----KNNCRCGDNCRCESC
        GCN  CGCAVPCPGG  C+C +A  +  A  H  C CGEHCGCNPC C    T  G    + NC CG  C C SC
Subjt:  GCNQTCGCAVPCPGGRVCKCATAGGEEVA--HRRCSCGEHCGCNPCTCPSAVTGVG----KNNCRCGDNCRCESC

P43401 EC protein homolog3.7e-1751.35Show/hide
Query:  GCNQTCGCAVPCPGGRVCKCATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKN----NCRCGDNCRCESCA
        GC+  CGCAVPCPGG+ C+C +  G +  H  C CGEHC C+PCTC  A    G+     NC CG +C C SCA
Subjt:  GCNQTCGCAVPCPGGRVCKCATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKN----NCRCGDNCRCESCA

P93746 Metallothionein-like protein 4A5.6e-1852.33Show/hide
Query:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC----ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA
        MA+T G G  V GCN +CGC  PCPGG  C+C    A+AG +   H  C CGEHCGCNPC CP   T      C CG+ C C SCA
Subjt:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC----ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA

Q109B0 Class II metallothionein-like protein 1A5.3e-1652.63Show/hide
Query:  GCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNN----CRCGDNCRCESC
        GC+  CGCAVPCPGG  C+CA+   +GG +  H  CSCG+HCGCNPC C       G+ N    C CGD+C C SC
Subjt:  GCNQTCGCAVPCPGGRVCKCAT---AGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNN----CRCGDNCRCESC

Q42377 Metallothionein-like protein 4B3.7e-1748.24Show/hide
Query:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC---ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA
        MA+TG G      CN  CGC  PCPGG  C+C   + A G +  H  C CGEHCGCNPC CP   T      C CG+ C C +CA
Subjt:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC---ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA

Arabidopsis top hitse value%identityAlignment
AT2G23240.1 Plant EC metallothionein-like protein, family 152.6e-1848.24Show/hide
Query:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC---ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA
        MA+TG G      CN  CGC  PCPGG  C+C   + A G +  H  C CGEHCGCNPC CP   T      C CG+ C C +CA
Subjt:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC---ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA

AT2G23240.2 Plant EC metallothionein-like protein, family 152.9e-1747.62Show/hide
Query:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCK--CATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA
        MA+TG G      CN  CGC  PCPGG  C+   + A G +  H  C CGEHCGCNPC CP   T      C CG+ C C +CA
Subjt:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCK--CATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA

AT2G42000.1 Plant EC metallothionein-like protein, family 154.0e-1952.33Show/hide
Query:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC----ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA
        MA+T G G  V GCN +CGC  PCPGG  C+C    A+AG +   H  C CGEHCGCNPC CP   T      C CG+ C C SCA
Subjt:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC----ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA

AT2G42000.2 Plant EC metallothionein-like protein, family 154.0e-1952.33Show/hide
Query:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC----ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA
        MA+T G G  V GCN +CGC  PCPGG  C+C    A+AG +   H  C CGEHCGCNPC CP   T      C CG+ C C SCA
Subjt:  MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKC----ATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACAGGCGGCGGCGGCGGCGGAGTGAGAGGTTGCAACCAGACCTGTGGCTGTGCCGTGCCGTGTCCCGGCGGAAGAGTCTGCAAGTGTGCGACGGCGGGCGG
TGAGGAGGTGGCGCACCGGCGGTGCTCGTGCGGGGAGCATTGCGGATGCAACCCCTGCACGTGCCCGAGTGCGGTGACCGGCGTGGGCAAGAATAACTGCAGGTGCGGCG
ACAACTGCCGGTGTGAAAGTTGCGCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
GGGAGAAAAGGAAAACAAATCTCGGTTGGCGGCGGAGCAAGAGCAAAGGATGGCAGAAACAGGCGGCGGCGGCGGCGGAGTGAGAGGTTGCAACCAGACCTGTGGCTGTG
CCGTGCCGTGTCCCGGCGGAAGAGTCTGCAAGTGTGCGACGGCGGGCGGTGAGGAGGTGGCGCACCGGCGGTGCTCGTGCGGGGAGCATTGCGGATGCAACCCCTGCACG
TGCCCGAGTGCGGTGACCGGCGTGGGCAAGAATAACTGCAGGTGCGGCGACAACTGCCGGTGTGAAAGTTGCGCTTGTTGAAAGTTCAAACCGAACCCTGAAACGGTGTC
GTTTTAGCTGCAGATGTATAGCTCTTGTGTGGGACTGTACATGGAATAAAACTCAGCTTCTACTCTAAATAAATATCTAAATTATCATATTTAACATATTGTTTAGT
Protein sequenceShow/hide protein sequence
MAETGGGGGGVRGCNQTCGCAVPCPGGRVCKCATAGGEEVAHRRCSCGEHCGCNPCTCPSAVTGVGKNNCRCGDNCRCESCAC