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Sed0006324 (gene) of Chayote v1 genome

Gene IDSed0006324
OrganismSechium edule (Chayote v1)
DescriptionEthylene-responsive transcription factor
Genome locationLG12:6599697..6600116
RNA-Seq ExpressionSed0006324
SyntenySed0006324
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582379.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]4.0e-5083.33Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP----RMGGRFSSS
        MDES GRGR YGEDS  AGG REIRYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYP      GG  SSS
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP----RMGGRFSSS

Query:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE-EKET
          SSSMSM+ NEVIEFEYLDDKVLEDLLD GEE +K+T
Subjt:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE-EKET

XP_004134413.1 ethylene-responsive transcription factor 14 [Cucumis sativus]5.3e-5085.5Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP-RMGGRF---SSS
        MDES GRGR YG+DS    G REIRYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP   GG +   SSS
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP-RMGGRF---SSS

Query:  SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE
        SSSMSM+QNEVIEFEYLDDKVLEDLLDYGEE
Subjt:  SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE

XP_022980085.1 ethylene-responsive transcription factor ERF096 [Cucurbita maxima]1.5e-4984.21Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP----RMGGRFSSS
        MDES GRGR Y EDS  AGG REIRYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYP      GG  SSS
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP----RMGGRFSSS

Query:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE
          SSSMSM+ NEVIEFEYLDDKVLEDLLD GEE
Subjt:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE

XP_023529041.1 ethylene-responsive transcription factor ERF096-like [Cucurbita pepo subsp. pepo]3.1e-5083.33Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM----GGRFSSS
        MDES GRGR Y EDS  AGG REIRYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYP      GG FSSS
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM----GGRFSSS

Query:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE-EKET
          SSSMSM+ NEVIEFEYLDDKVLEDLLD GEE +K+T
Subjt:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE-EKET

XP_038877364.1 ethylene-responsive transcription factor ERF096 [Benincasa hispida]4.3e-5283.33Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM-------GGRF
        MDES GRGR Y EDS  AGG REIRYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP         GGR+
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM-------GGRF

Query:  ----SSSSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE
            SSSSSSMSM+QNEVIEFEYLDDKVLEDLLDYGEE
Subjt:  ----SSSSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE

TrEMBL top hitse value%identityAlignment
A0A0A0L9V5 AP2/ERF domain-containing protein2.6e-5085.5Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP-RMGGRF---SSS
        MDES GRGR YG+DS    G REIRYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP   GG +   SSS
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP-RMGGRF---SSS

Query:  SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE
        SSSMSM+QNEVIEFEYLDDKVLEDLLDYGEE
Subjt:  SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE

A0A5A7U6W8 Ethylene-responsive transcription factor ERF0967.4e-5082.96Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM----GGRF---
        MDES GRGR +G+D   AGG REIRYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP      GG +   
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM----GGRF---

Query:  -SSSSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE
         SSSSSSMSM+QNEVIEFEYLDDKVLEDLLDYGEE
Subjt:  -SSSSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE

A0A6J1FUX6 ethylene-responsive transcription factor ERF096-like1.3e-4980.29Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGRE-IRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM------GGRF
        MD S GRG+ Y EDS AAGGG+E IRYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFP+EYP        GG F
Subjt:  MDESAGRGRRYGEDSEAAGGGRE-IRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM------GGRF

Query:  SSSSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEEEKE
         SSSSS SMQQ+EVIEFEYLDDKVLEDLL+YGEE ++
Subjt:  SSSSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEEEKE

A0A6J1IFP4 ethylene-responsive transcription factor ERF096-like1.3e-4980.74Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGRE-IRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM----GGRFSS
        MD S GRG+ Y EDS AAGGG+E IRYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFP+EYP      GG F S
Subjt:  MDESAGRGRRYGEDSEAAGGGRE-IRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM----GGRFSS

Query:  SSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEEEKE
        SSSS SMQQ++VIEFEYLDDKVLEDLL+YGEE ++
Subjt:  SSSSMSMQQNEVIEFEYLDDKVLEDLLDYGEEEKE

A0A6J1IV86 ethylene-responsive transcription factor ERF0967.4e-5084.21Show/hide
Query:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP----RMGGRFSSS
        MDES GRGR Y EDS  AGG REIRYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYP      GG  SSS
Subjt:  MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYP----RMGGRFSSS

Query:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE
          SSSMSM+ NEVIEFEYLDDKVLEDLLD GEE
Subjt:  --SSSMSMQQNEVIEFEYLDDKVLEDLLDYGEE

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI55.3e-2178.69Show/hide
Query:  RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNE
        +YRGVRRRPWGK+AAEIRDS R GAR+WLGTF TAEEAA AYDRAA+ MRG  A+LNFP+E
Subjt:  RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNE

P93822 Ethylene-responsive transcription factor 143.8e-3563.41Show/hide
Query:  GEDSEAAGGGREI-RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSSSSSMSMQQNEVIEF
        G  S + GGG E  +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAY+MRG  AILNFP+EY  MG   SS++++ S    +V EF
Subjt:  GEDSEAAGGGREI-RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSSSSSMSMQQNEVIEF

Query:  EYLDDKVLEDLLDYGEEEKETNN
        EYLDD VL++LL+YGE   +T+N
Subjt:  EYLDDKVLEDLLDYGEEEKETNN

Q9LSX0 Ethylene-responsive transcription factor ERF0962.0e-3163.25Show/hide
Query:  GGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSS---------SSSMSMQQNEVIEF
        G    +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAY+MRG  AILNFP+EY  MG   SSS         S+S S    +V EF
Subjt:  GGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSS---------SSSMSMQQNEVIEF

Query:  EYLDDKVLEDLLDYGEE
        EYLDD VLE+LL+ GE+
Subjt:  EYLDDKVLEDLLDYGEE

Q9LTC5 Ethylene-responsive transcription factor ERF0984.2e-3465.32Show/hide
Query:  REIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNE-YPRMGG-----RFSSSSSSMS----------MQQN
        ++ R+RGVRRRPWGKFAAEIRD  R GAR+WLGTF TAEEAARAYDRAA+N+RGHLAILNFPNE YPRM        ++SSSSS S            Q 
Subjt:  REIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNE-YPRMGG-----RFSSSSSSMS----------MQQN

Query:  EVIEFEYLDDKVLEDLLDYGEEEK
        EV EFEYLDDKVLE+LLD  E ++
Subjt:  EVIEFEYLDDKVLEDLLDYGEEEK

Q9LTC6 Ethylene-responsive transcription factor ERF0953.0e-3260.98Show/hide
Query:  EIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM-----GGRFSSSSSSMSMQQ--------NEVIE
        E++YRGVR+RPWGK+AAEIRDS R GAR+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY  M     G   ++ +SS S  +         EVIE
Subjt:  EIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM-----GGRFSSSSSSMSMQQ--------NEVIE

Query:  FEYLDDKVLEDLLDYGEEEKETN
        FEYLDD +LE+LLDYGE   + N
Subjt:  FEYLDDKVLEDLLDYGEEEKETN

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 142.7e-3663.41Show/hide
Query:  GEDSEAAGGGREI-RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSSSSSMSMQQNEVIEF
        G  S + GGG E  +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAY+MRG  AILNFP+EY  MG   SS++++ S    +V EF
Subjt:  GEDSEAAGGGREI-RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSSSSSMSMQQNEVIEF

Query:  EYLDDKVLEDLLDYGEEEKETNN
        EYLDD VL++LL+YGE   +T+N
Subjt:  EYLDDKVLEDLLDYGEEEKETNN

AT1G06160.1 octadecanoid-responsive Arabidopsis AP2/ERF 592.7e-2063.89Show/hide
Query:  GEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP
        G+++  A    E  YRGVR+RPWGKFAAEIRDS R+G R+WLGTF+TAE AA AYD+AA+ ++G LA+LNFP
Subjt:  GEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP

AT3G23220.1 Integrase-type DNA-binding superfamily protein2.1e-3360.98Show/hide
Query:  EIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM-----GGRFSSSSSSMSMQQ--------NEVIE
        E++YRGVR+RPWGK+AAEIRDS R GAR+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY  M     G   ++ +SS S  +         EVIE
Subjt:  EIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRM-----GGRFSSSSSSMSMQQ--------NEVIE

Query:  FEYLDDKVLEDLLDYGEEEKETN
        FEYLDD +LE+LLDYGE   + N
Subjt:  FEYLDDKVLEDLLDYGEEEKETN

AT3G23230.1 Integrase-type DNA-binding superfamily protein3.0e-3565.32Show/hide
Query:  REIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNE-YPRMGG-----RFSSSSSSMS----------MQQN
        ++ R+RGVRRRPWGKFAAEIRD  R GAR+WLGTF TAEEAARAYDRAA+N+RGHLAILNFPNE YPRM        ++SSSSS S            Q 
Subjt:  REIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNE-YPRMGG-----RFSSSSSSMS----------MQQN

Query:  EVIEFEYLDDKVLEDLLDYGEEEK
        EV EFEYLDDKVLE+LLD  E ++
Subjt:  EVIEFEYLDDKVLEDLLDYGEEEK

AT5G43410.1 Integrase-type DNA-binding superfamily protein1.4e-3263.25Show/hide
Query:  GGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSS---------SSSMSMQQNEVIEF
        G    +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAY+MRG  AILNFP+EY  MG   SSS         S+S S    +V EF
Subjt:  GGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSS---------SSSMSMQQNEVIEF

Query:  EYLDDKVLEDLLDYGEE
        EYLDD VLE+LL+ GE+
Subjt:  EYLDDKVLEDLLDYGEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGTCTGCTGGGCGTGGAAGAAGATACGGGGAGGATTCGGAAGCAGCCGGAGGCGGAAGAGAGATCCGTTACAGGGGCGTACGACGGCGGCCGTGGGGCAAGTT
CGCGGCTGAGATACGCGACTCAAGAAGGCAAGGGGCTCGCATGTGGCTCGGGACTTTCAACACGGCCGAGGAAGCTGCACGTGCTTACGATCGAGCGGCTTACAACATGA
GAGGTCATTTGGCCATTTTGAACTTCCCCAATGAATACCCTCGTATGGGCGGCAGATTTTCTTCTTCGTCTTCTTCAATGTCAATGCAGCAAAATGAAGTGATTGAATTC
GAATATTTGGATGATAAAGTGCTGGAAGATCTTCTTGACTATGGAGAAGAAGAAAAAGAAACTAATAATCCAGAAACAAGTTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGTCTGCTGGGCGTGGAAGAAGATACGGGGAGGATTCGGAAGCAGCCGGAGGCGGAAGAGAGATCCGTTACAGGGGCGTACGACGGCGGCCGTGGGGCAAGTT
CGCGGCTGAGATACGCGACTCAAGAAGGCAAGGGGCTCGCATGTGGCTCGGGACTTTCAACACGGCCGAGGAAGCTGCACGTGCTTACGATCGAGCGGCTTACAACATGA
GAGGTCATTTGGCCATTTTGAACTTCCCCAATGAATACCCTCGTATGGGCGGCAGATTTTCTTCTTCGTCTTCTTCAATGTCAATGCAGCAAAATGAAGTGATTGAATTC
GAATATTTGGATGATAAAGTGCTGGAAGATCTTCTTGACTATGGAGAAGAAGAAAAAGAAACTAATAATCCAGAAACAAGTTGGAAATGA
Protein sequenceShow/hide protein sequence
MDESAGRGRRYGEDSEAAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPRMGGRFSSSSSSMSMQQNEVIEF
EYLDDKVLEDLLDYGEEEKETNNPETSWK