CuGenDBv2

Gene ID	Sed0006330
Organism	Sechium edule (Chayote v1)
Description	Coilin
Genome location	LG04:4407006..4417988
RNA-Seq Expression	Sed0006330
Synteny	Sed0006330
Gene Ontology terms	NA
InterPro domains	IPR024822 - Coilin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601546.1 Coilin, partial [Cucurbita argyrosperma subsp. sororia]

8.0e-118

51.42

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------
        GFVL PFE  CILK KDIVRVK KKSKAI+     +FRE K +              E DG ESE EEDEPK T          K+SK            
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------

Query:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------
                    P IIA VQ AN+KHEE N+LKSD  QKV+V +ND S +SSE                          ++D                  
Subjt:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------

Query:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI
          GP+RS+  KKAKR WLRE+AQ EE                NDDV M +DTVPV+VKPGHI F+PVGKVA   AG+QKQNHF K             E 
Subjt:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI

Query:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY
        LHWNGIT KKKGQKWGK+           +CTDEPLQLP SE  QPT PAPVVG INFDELRPCTGLPQ                        AGKV+WY
Subjt:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY

Query:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-
        DI SNRIML+PV EYP+PVKKEIDEDSASQLD NP       K     DFASLVDL LI QGNL+S +T VNQEI  AKQ+AESSK  HNNG+ANDTKQ 
Subjt:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-

Query:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
         GKV AWDE+S+ALSAK+   S + DG NQEESSG RSWSYR LRGS L P MALL AQ ++
Subjt:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

KAG7032318.1 Coilin [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-117

51.25

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------
        GFVL PFE  CILK KDIVRVK KKSKAI+     +FRE K +              E DG ESE EEDEPK T          K+SK            
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------

Query:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------
                    P IIA VQ AN+KHEE N+LKSD  QKV+V +ND S +SSE                          ++D                  
Subjt:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------

Query:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI
          GP+RS+  KKAKR WLRE+AQ EE                NDDV M +DTVPV+VKPGHI F+PVGKVA   AG+QKQNHF K             E 
Subjt:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI

Query:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY
        LHWNGIT KKKGQKWGK+           +CTDEPLQLP SE  QPT PAPVVG INFDELRPCTGLPQ                        AGKV+WY
Subjt:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY

Query:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-
        DI SNRIML+PV EYP+PVKKEIDED ASQLD NP       K     DFASLVDL LI QGNL+S +T VNQEI  AKQ+AESSK  HNNG+ANDTKQ 
Subjt:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-

Query:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
         GKV AWDE+S+ALSAK+   S + DG NQEESSG RSWSYR LRGS L P MALL AQ ++
Subjt:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

TYK15659.1 coilin isoform X1 [Cucumis melo var. makuwa]

2.3e-117

51.38

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------
        GFVL PFE  CILK +DIVRVK KKSKA       RLIETE+FRE KP+              E +GYES+ EEDE   T          K+SK      
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------

Query:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------
                          P IIA V++ +EKHEE N+LKS+  QKVLV++ D SS+SSE   D                                     
Subjt:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------

Query:  --------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLI
                GP+RS+  KKAKR WLRE+AQ+EE                NDDV M DDTVPV+VKPGHI F+PVGKV   QAG++K+NHF K         
Subjt:  --------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLI

Query:  LPLEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQAGKVSWYDIASNRIMLIPVLEYPVPV
            E LHWNGIT KKKGQKWGK+            CT EPLQL    +QP  P PVVGSINFDELRP TGLPQAGKVSWYD  SNRIMLIPV EYP+PV
Subjt:  LPLEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQAGKVSWYDIASNRIMLIPVLEYPVPV

Query:  KKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ--GKVGAWDEMSEALSAKRE
        KKEIDEDS  Q D  P       K     DFASLVDL LIRQGNL+S +T VNQEI S KQ AESSK +HNNG+ANDT+Q  GKV AWDE+SEALSAK+ 
Subjt:  KKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ--GKVGAWDEMSEALSAKRE

Query:  VSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
        V   + +G NQEESSGR+SWSYR LRGS L P MALL +QK++
Subjt:  VSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

XP_022956914.1 coilin [Cucurbita moschata]

2.1e-118

51.25

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------
        GFVL PFE  CILK KDIVRVK KKSKAI+     +FRE K +              E DGYESEPEEDEP+ T          K+SK            
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------

Query:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------
                    P IIA VQ AN+KHEE N+LK +  QKV+V +ND S +SSE                          ++D                  
Subjt:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------

Query:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI
          GP+RS+  KKAKR WLRE+AQ EE                NDDV M +DTVPV+VKPGHI F+PVGKVA   AG+QKQNHF K             E 
Subjt:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI

Query:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY
        LHWNGIT KKKGQKWGK+           +CTDEPLQLP SE +QPT PAPVVG INFDELRPCTGLPQ                        AGKV+WY
Subjt:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY

Query:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-
        DI SNRIML+PV EYP+PVKKEIDEDSASQLD NP       K     DFASLVDL LI QGNL+S +T VNQEI  AKQ+AESSK  HNNG+ANDTKQ 
Subjt:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-

Query:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
         GKV AWDE+S+ALSAK+   S + DG NQEESSG RSWSYR LRGS L P MALL AQ ++
Subjt:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

XP_023539699.1 coilin [Cucurbita pepo subsp. pepo]

8.9e-117

50.53

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT--------------------------
        GFVL PFE  CILK KDIVRVK KKSKAI+     +FRE K +              E DG ESE EEDEPK T                          
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT--------------------------

Query:  ------TKISKIPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------
              ++I + P IIA VQ AN+KHEE N+LKSD  QKV+V +ND S +SSE                          ++D                  
Subjt:  ------TKISKIPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------

Query:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI
          GP+RS+  KKAKR WLRE+AQ+EE                NDDV M +DTVPV+VKPGHI F+PVGKVA   AG+QKQNHF K             E 
Subjt:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI

Query:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY
        LHWNGIT KKKGQKWGK+           +CTDEPLQLP +E +QPT PAPVVG INFDELRPCTGLPQ                         GKV+WY
Subjt:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY

Query:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-
        DI SNRIML+PV EYP+PVKKEIDEDSASQLD NP       K     DFASLVDL LI QGNL+S +T V QEI  AKQ+AESSK  HNNG+ANDTKQ 
Subjt:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-

Query:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
         GKV AWDE+S+ALSAK+   S + DG NQEESSG RSWSYR LRGS L P MALL AQ ++
Subjt:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BF15 Coilin

1.3e-113

49.21

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------
        GFVL PFE  CILK +DIVRVK KKSKA       RLIETE+FRE KP+              E +GYES+ EEDE   T          K+SK      
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------

Query:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------
                          P IIA V++ +EKHEE N+LKS+  QKVLV++ D SS+SSE   D                                     
Subjt:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------

Query:  --------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLI
                GP+RS+  KKAKR WLRE+AQ+EE                NDDV M DDTVPV+VKPGHI F+PVGKV   QAG++K+NHF K         
Subjt:  --------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLI

Query:  LPLEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQ------------------------AG
            E LHWNGIT KKKGQKWGK+            CT EPLQL    +QP  P PVVGSINFDELRP TGLPQ                        AG
Subjt:  LPLEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQ------------------------AG

Query:  KVSWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNAN
        KVSWYD  SNRIMLIPV EYP+PVKKEIDEDS  Q D  P       K     DFASLVDL LIRQGNL+S +T VNQEI S KQ AESSK +HNNG+AN
Subjt:  KVSWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNAN

Query:  DTKQ--GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
        DT+Q  GKV AWDE+SEALSAK+ V   + +G NQEESSGR+SWSYR LRGS L P MALL +QK++
Subjt:  DTKQ--GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

A0A1S3BF70 Coilin

7.6e-114

49.38

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------
        GFVL PFE  CILK +DIVRVK KKSKA       RLIETE+FRE KP+              E +GYES+ EEDE   T          K+SK      
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------

Query:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------
                          P IIA V++ +EKHEE N+LKS+  QKVLV++ D SS+SSE   D                                     
Subjt:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------

Query:  --------GPNRSSHCKKAKRCWLREKAQDEE--------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILP
                GP+RS+  KKAKR WLRE+AQ+EE              NDDV M DDTVPV+VKPGHI F+PVGKV   QAG++K+NHF K           
Subjt:  --------GPNRSSHCKKAKRCWLREKAQDEE--------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILP

Query:  LEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKV
          E LHWNGIT KKKGQKWGK+            CT EPLQL    +QP  P PVVGSINFDELRP TGLPQ                        AGKV
Subjt:  LEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKV

Query:  SWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDT
        SWYD  SNRIMLIPV EYP+PVKKEIDEDS  Q D  P       K     DFASLVDL LIRQGNL+S +T VNQEI S KQ AESSK +HNNG+ANDT
Subjt:  SWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDT

Query:  KQ--GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
        +Q  GKV AWDE+SEALSAK+ V   + +G NQEESSGR+SWSYR LRGS L P MALL +QK++
Subjt:  KQ--GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

A0A5D3CZQ0 Coilin

1.1e-117

51.38

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------
        GFVL PFE  CILK +DIVRVK KKSKA       RLIETE+FRE KP+              E +GYES+ EEDE   T          K+SK      
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAI------RLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------

Query:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------
                          P IIA V++ +EKHEE N+LKS+  QKVLV++ D SS+SSE   D                                     
Subjt:  -----------------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSESKLD-------------------------------------

Query:  --------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLI
                GP+RS+  KKAKR WLRE+AQ+EE                NDDV M DDTVPV+VKPGHI F+PVGKV   QAG++K+NHF K         
Subjt:  --------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLI

Query:  LPLEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQAGKVSWYDIASNRIMLIPVLEYPVPV
            E LHWNGIT KKKGQKWGK+            CT EPLQL    +QP  P PVVGSINFDELRP TGLPQAGKVSWYD  SNRIMLIPV EYP+PV
Subjt:  LPLEEILHWNGITKKKKGQKWGKDN-----------CTDEPLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQAGKVSWYDIASNRIMLIPVLEYPVPV

Query:  KKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ--GKVGAWDEMSEALSAKRE
        KKEIDEDS  Q D  P       K     DFASLVDL LIRQGNL+S +T VNQEI S KQ AESSK +HNNG+ANDT+Q  GKV AWDE+SEALSAK+ 
Subjt:  KKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ--GKVGAWDEMSEALSAKRE

Query:  VSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
        V   + +G NQEESSGR+SWSYR LRGS L P MALL +QK++
Subjt:  VSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

A0A6J1DEE4 Coilin

7.6e-114

49.91

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIR------LIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------
        GFVL PFE  CILK KDIVRVK +KSKAI       LI TE+FRE KP+              E DGYESE EE++PK T          K+SK      
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIR------LIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------

Query:  -----------------IPPIIAVVQYANEKHEENNNLKSDHL---QKVLVNENDLSSNSSESKLD----------------------------------
                          P IIA VQ+ANEKHEE  +LKS+     QKVLVN+ND SS+SSE + D                                  
Subjt:  -----------------IPPIIAVVQYANEKHEENNNLKSDHL---QKVLVNENDLSSNSSESKLD----------------------------------

Query:  -----------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFP
                   GP+RSS  KKAKR WLREKAQ+EE                NDDV M D+TVPV+VKPGHI F+P+GKVA  QAGEQKQ+HF        
Subjt:  -----------GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFP

Query:  YLILPLEEILHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ----------------------
               E LHWNGIT KKKGQKWGK+           N T EPLQLP SE +QP  P PVVG INFDELRPCTG PQ                      
Subjt:  YLILPLEEILHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ----------------------

Query:  --AGKVSWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNN
           GKVSWYDI SNRIMLIPV EYP+  KKEIDEDSASQ D  P       K     DFASLVDL LI+QGNL+S K  VN+EI S  Q+AESS  IHNN
Subjt:  --AGKVSWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNN

Query:  GNANDTKQ--GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
        G+AN+ KQ  GKV AWDE+SEALSAK+   S + DG NQEESSGRRSWS+R LRGS L P+MALL AQ ++
Subjt:  GNANDTKQ--GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

A0A6J1H0F7 Coilin

1.0e-118

51.25

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------
        GFVL PFE  CILK KDIVRVK KKSKAI+     +FRE K +              E DGYESEPEEDEP+ T          K+SK            
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPM--------------EFDGYESEPEEDEPKCT---------TKISK------------

Query:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------
                    P IIA VQ AN+KHEE N+LK +  QKV+V +ND S +SSE                          ++D                  
Subjt:  -----------IPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSSE-------------------------SKLD------------------

Query:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI
          GP+RS+  KKAKR WLRE+AQ EE                NDDV M +DTVPV+VKPGHI F+PVGKVA   AG+QKQNHF K             E 
Subjt:  --GPNRSSHCKKAKRCWLREKAQDEE----------------NDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEI

Query:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY
        LHWNGIT KKKGQKWGK+           +CTDEPLQLP SE +QPT PAPVVG INFDELRPCTGLPQ                        AGKV+WY
Subjt:  LHWNGITKKKKGQKWGKD-----------NCTDEPLQLPISE-KQPTIPAPVVGSINFDELRPCTGLPQ------------------------AGKVSWY

Query:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-
        DI SNRIML+PV EYP+PVKKEIDEDSASQLD NP       K     DFASLVDL LI QGNL+S +T VNQEI  AKQ+AESSK  HNNG+ANDTKQ 
Subjt:  DIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNANDTKQ-

Query:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
         GKV AWDE+S+ALSAK+   S + DG NQEESSG RSWSYR LRGS L P MALL AQ ++
Subjt:  -GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

SwissProt top hits

e value

%identity

Alignment

Q8RWK8 Coilin

3.1e-32

28.09

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRL------------IETEQFRESKP-----------MEFDGYESEPEEDE---------------------
        GFVL PFE  C+LK KDIV VK KK   + +            IE E+  + +P            E  GYESE EEDE                     
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRL------------IETEQFRESKP-----------MEFDGYESEPEEDE---------------------

Query:  --------PKCTTKISKIPP--------IIAVVQYANEK---------HEENNN--------LKSDHLQKVLVNENDLSSNSSESKLDGPNRSSHCKKAK
                 KC    ++  P        +  VV+   +K         ++E NN         K    Q+     NDL   S+E+K   P+RS+  KKAK
Subjt:  --------PKCTTKISKIPP--------IIAVVQYANEK---------HEENNN--------LKSDHLQKVLVNENDLSSNSSESKLDGPNRSSHCKKAK

Query:  RCWLREKA----------------------------------------QDEENDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLF
        R WLREK                                         Q EE  D +  D+ VPV V+PGHI FKP+      +A    +          
Subjt:  RCWLREKA----------------------------------------QDEENDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLF

Query:  PYLILPLEEILHWNGITKKKKGQKWG--------------KDNCTDEPLQLPISEKQPTIPAPVV---GSINFDEL------------RPCTGLPQAGKV
             PL E + WNG   KKKGQKWG               ++ T +P +       P     +V   GS+   ++             P     + GK+
Subjt:  PYLILPLEEILHWNGITKKKKGQKWG--------------KDNCTDEPLQLPISEKQPTIPAPVV---GSINFDEL------------RPCTGLPQAGKV

Query:  SWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKD--LQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNAN
        S+YD  S  + L+PV E+P+  K E D+D   Q D +      L+K+    + +F++L+D+  ++  + +S +      +    QSA+  K   N     
Subjt:  SWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKD--LQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNAN

Query:  DTKQ-GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
          K+ G+V  W+E+SEALSAK+   S   +G N++ SS   SWSY+ LRGS + P+M  L +QK+I
Subjt:  DTKQ-GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

2.2e-33

28.09

Show/hide

Query:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRL------------IETEQFRESKP-----------MEFDGYESEPEEDE---------------------
        GFVL PFE  C+LK KDIV VK KK   + +            IE E+  + +P            E  GYESE EEDE                     
Subjt:  GFVLSPFELFCILKVKDIVRVKDKKSKAIRL------------IETEQFRESKP-----------MEFDGYESEPEEDE---------------------

Query:  --------PKCTTKISKIPP--------IIAVVQYANEK---------HEENNN--------LKSDHLQKVLVNENDLSSNSSESKLDGPNRSSHCKKAK
                 KC    ++  P        +  VV+   +K         ++E NN         K    Q+     NDL   S+E+K   P+RS+  KKAK
Subjt:  --------PKCTTKISKIPP--------IIAVVQYANEK---------HEENNN--------LKSDHLQKVLVNENDLSSNSSESKLDGPNRSSHCKKAK

Query:  RCWLREKA----------------------------------------QDEENDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLF
        R WLREK                                         Q EE  D +  D+ VPV V+PGHI FKP+      +A    +          
Subjt:  RCWLREKA----------------------------------------QDEENDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLF

Query:  PYLILPLEEILHWNGITKKKKGQKWG--------------KDNCTDEPLQLPISEKQPTIPAPVV---GSINFDEL------------RPCTGLPQAGKV
             PL E + WNG   KKKGQKWG               ++ T +P +       P     +V   GS+   ++             P     + GK+
Subjt:  PYLILPLEEILHWNGITKKKKGQKWG--------------KDNCTDEPLQLPISEKQPTIPAPVV---GSINFDEL------------RPCTGLPQAGKV

Query:  SWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKD--LQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNAN
        S+YD  S  + L+PV E+P+  K E D+D   Q D +      L+K+    + +F++L+D+  ++  + +S +      +    QSA+  K   N     
Subjt:  SWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKD--LQQTDFASLVDLLLIRQGNLNSPKTTVNQEIASAKQSAESSKRIHNNGNAN

Query:  DTKQ-GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI
          K+ G+V  W+E+SEALSAK+   S   +G N++ SS   SWSY+ LRGS + P+M  L +QK+I
Subjt:  DTKQ-GKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAGATGGAGGATTTGTGTTGTCTCCATTTGAGTTGTTCTGTATCTTGAAGGTTAAGGACATTGTCAGAGTGAAGGACAAGAAAAGTAAGGCAATCAGATTGATCGA
AACTGAGCAATTCAGGGAGAGTAAACCGATGGAGTTTGATGGCTATGAGAGTGAACCAGAGGAAGATGAACCGAAATGTACAACAAAAATTTCCAAAATTCCACCTATCA
TAGCAGTCGTCCAGTACGCTAATGAAAAGCACGAAGAAAACAATAATCTGAAGTCTGACCACCTGCAAAAAGTTCTAGTCAACGAAAATGATTTATCCAGCAATTCTAGT
GAATCTAAATTGGATGGTCCTAATAGAAGTAGTCACTGTAAAAAGGCAAAGCGGTGTTGGTTGAGGGAAAAAGCTCAAGATGAGGAGAATGATGATGTTTATATGCACGA
TGATACTGTTCCTGTGATAGTTAAGCCAGGACACATTAGCTTCAAGCCAGTTGGAAAAGTTGCTGTGCATCAGGCGGGGGAGCAAAAGCAAAACCATTTCCTAAAGTTAT
CCATGCTGTTCCCATATCTTATTCTGCCTCTTGAAGAGATATTGCATTGGAATGGCATAACCAAAAAGAAAAAAGGTCAGAAATGGGGCAAAGACAATTGTACTGACGAA
CCTCTTCAGTTGCCTATTTCTGAAAAGCAACCTACAATTCCGGCACCTGTAGTTGGCTCCATAAATTTTGATGAACTAAGACCGTGCACTGGTTTGCCTCAGGCTGGAAA
AGTATCATGGTACGACATTGCATCCAATCGAATTATGCTAATACCAGTTCTAGAATACCCAGTACCTGTGAAAAAGGAGATAGACGAGGATTCTGCATCACAGCTAGACC
ACAACCCCATATGCGGAAAACGGCTCTTTAAAGATCTTCAACAGACAGATTTTGCCTCTCTTGTTGATCTTCTGCTAATCAGGCAAGGAAACTTGAATTCTCCAAAAACT
ACAGTTAACCAGGAAATCGCTTCTGCTAAACAAAGTGCAGAAAGTTCCAAACGCATCCATAACAATGGAAATGCCAACGACACTAAACAAGGTAAAGTAGGTGCATGGGA
TGAAATGAGCGAGGCTCTGAGTGCAAAACGAGAAGTAAGTTCAGTAAGGCCAGATGGTTCCAATCAAGAAGAAAGTTCAGGAAGGAGGTCATGGTCCTATAGGGAGCTTA
GAGGAAGCCCCCTCAGTCCAATAATGGCTCTATTAAGCGCTCAGAAAGATATCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVDGGFVLSPFELFCILKVKDIVRVKDKKSKAIRLIETEQFRESKPMEFDGYESEPEEDEPKCTTKISKIPPIIAVVQYANEKHEENNNLKSDHLQKVLVNENDLSSNSS
ESKLDGPNRSSHCKKAKRCWLREKAQDEENDDVYMHDDTVPVIVKPGHISFKPVGKVAVHQAGEQKQNHFLKLSMLFPYLILPLEEILHWNGITKKKKGQKWGKDNCTDE
PLQLPISEKQPTIPAPVVGSINFDELRPCTGLPQAGKVSWYDIASNRIMLIPVLEYPVPVKKEIDEDSASQLDHNPICGKRLFKDLQQTDFASLVDLLLIRQGNLNSPKT
TVNQEIASAKQSAESSKRIHNNGNANDTKQGKVGAWDEMSEALSAKREVSSVRPDGSNQEESSGRRSWSYRELRGSPLSPIMALLSAQKDI

Sed0006330 (gene) of Chayote v1 genome