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Sed0006341 (gene) of Chayote v1 genome

Gene IDSed0006341
OrganismSechium edule (Chayote v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationLG08:37365820..37369200
RNA-Seq ExpressionSed0006341
SyntenySed0006341
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWR75919.1 protein transport protein Sec61 subunit gamma [Cinnamomum micranthum f. kanehirae]2.8e-2897.1Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_008439824.1 PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo]2.2e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_020163946.1 protein transport protein Sec61 subunit gamma [Aegilops tauschii subsp. strangulata]2.8e-2897.1Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022137357.1 uncharacterized protein LOC111008832 isoform X1 [Momordica charantia]2.2e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_022137358.1 uncharacterized protein LOC111008832 isoform X2 [Momordica charantia]2.2e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A5D3BJ11 Protein transport protein Sec61 subunit gamma1.0e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1C817 uncharacterized protein LOC111008832 isoform X11.0e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1CA50 uncharacterized protein LOC111008832 isoform X21.0e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1GT74 protein transport protein Sec61 subunit gamma1.0e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A6J1JW08 protein transport protein Sec61 subunit gamma1.0e-2898.55Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-11.6e-2992.65Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSV+DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-21.6e-2992.65Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSV+DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma8.2e-3197.1Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAVDSV+DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma5.3e-2276.47Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD V   I+P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-36.5e-2889.71Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DS IDPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein4.6e-2989.71Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DS IDPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein1.1e-3092.65Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSV+DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein1.1e-3092.65Show/hide
Query:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDA+DSV+DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCGTAGATTCAGTCATCGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGCGGTGCCACAAGCCCGATCGCAAAGAATTCACCAAGGTTGC
CGTCCGTACCGCCATCGGCTTCGTTGTGATGGGATTCGTAGGGTTCTTCGTCAAGCTAATCTTCATTCCGATCAATAACATCATCGTCGGATCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
CCCCCTTAAACCAAATTTCGCCAAACATTTCAATTGTTGACTTTTTCTTCGCAGCTCGTAGCCATGGACGCCGTAGATTCAGTCATCGATCCTCTCAGAGAGTTCGCCAA
GGACAGCGTTCGTCTCGTTAAGCGGTGCCACAAGCCCGATCGCAAAGAATTCACCAAGGTTGCCGTCCGTACCGCCATCGGCTTCGTTGTGATGGGATTCGTAGGGTTCT
TCGTCAAGCTAATCTTCATTCCGATCAATAACATCATCGTCGGATCTGGTTAAATTAGGTCATGAAAGAGTTTCGTAGGTGATGGCGGCTAGCGGTCACGTATAGTGCAA
CTTGTGTTCATTGAGGAATACTTAGGCATTTAGCTCTTCTTCAGAACTTTTACATCTTCATGCGTAAATTGAGTAAACCCCAGGATATGTGGAAAATTTTCTTGTCACAT
TAATGAACTCATTTATATTTGATTGTTATAACGTGTTCTTTTGGCTAAATATTCATTTGGAAATTCGTCGTGTGACTGCATTACTGCCCTTTTCTGCTAGGCAAGAATAA
TCGTGTCTATTATATCGCGATGATGGGCTTAGAGAAGAATATCGAGTTTTGTTCTCGAAGCCTTTACTTCTTGAGCTAATGAGCTACTGTACACGACCTTGATAGTTGAT
ATTGATAGAACGAACTGCCCCATGTTTGTTCCGGAACAAAACAATTAGAATTATGCTCCTTGAACTAGAAAATTGCCTCCGAGGCTCGAGGAGAAGAAGGACTATCAAAG
TGTAGTAAGGAATCAGTTATGAGGGTTGAGATTGAAGCTTAATGAGTTGTAGAGGTACAAAATCTTAACCCAAGTTTCGGGTTTCTGCAGATATGAGCGGGTTTGGTCCT
GTTGCCTTTCGATCATTATTGAAGTAGTAAATCTGAATCTTGACTTCGATCTCAAACTGATATACCTCATGATTGTTAAGCTTGAGAAGTACTCATAATAGTCAGAATTT
GATGTGGGTTGCAGCTTATTATTACATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAATCTCATATGTGGGCTGCTATTCCATCTCCATCTACAGATCCTGATGCAATAG
TTCTGAAGAAAAAATTGACTAATATGCTTAAAGGTCGTTGAAGTACAAACTCACTTGTCCAAAGAAACCTTATAAATTTAATAGCTCCTTCATTTAAAGGGTTTTGAAAG
CAACAACTCTTATCACTCAATAAGACTGCATAGCTAAAAGGGTCACAGAAGATTCCCTGAAGATCAAGTACTCAGTACTCCTTGTATGTCGAAGACCGGCCGAAGCTTGA
ATTTCGAAAACTCTTTGAAACCCTTGGGGGCTGTTTGTTTGAAACATTTAGGTAGGATTTAGCTTAAGGAATTATATTGAGGAG
Protein sequenceShow/hide protein sequence
MDAVDSVIDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG