| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008456369.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 [Cucumis melo] | 2.0e-82 | 77.29 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MV PEEEIT+LFR+RKTV++MLKDRGY VGDFE+DMS+ QF NKFGENMKREDL INK+KRNNSSDQIY+FFPE PKVGI V TY+ RM SENV AI
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD--TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
VV++NLTPFA N I + +T +H+E+FQE+ELM+NIK+HVL+PEHQ L+DEEKKTLL RYTVKETQLPR+QV DPIA+YYG+KRGQVVKIIRPSETAGRY
Subjt: VVKVNLTPFALNLIRD--TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_018829461.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Juglans regia] | 5.9e-82 | 77.67 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
M L EEEITRLFRIR+TVM+MLKDRGY VGDFEIDM+++QF NK+GE+MKREDL INK+KRNNSSDQIYIFFPE PKVG+ T+ TY +RM SENV AIL
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA + I + +T H+E+FQE+EL+INIK+HVLVPEHQ+L++EEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022955185.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.3e-81 | 77.67 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MVL EEEITRLFRIRKT+M+MLKDRGY VGD +IDMSR QF NK+G+NMKREDL INKA RNNSSDQIYIFFPE PKVG+ T+ TY RM SENV AIL
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA I + ++ H+E+FQE+ELM+N+KDHVL+PEHQLL++EEKKTLLERYTVKETQLPRIQV DPIA+YYG+KRGQV+KIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 2.4e-83 | 78.64 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MVL EEEITRLFR+RKTV++MLKDRGY VGDFE+DMSR+QF NK+GE+MKRED+ INKAKRN+SSDQIYIFFPE PKVG+ T+ TY RM SENV AIL
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA I + +T H+E+FQE+EL++NIKDHVLVPEHQLLS+EEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_038895255.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Benincasa hispida] | 3.8e-81 | 77.67 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MVL EEEIT+LFR+RKTV++MLKDRGY VGD E+ MSR+QF KFGE+MKREDL INK+KRNNSS+QIYIFFPE PKVGI TV TY+ RM SENVS A+L
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA + + ++ H+E+FQE+ELM+NIKDHVL+PEHQLL++EEKKTLLERYTVKETQLPRIQV DPIA+YYGMKRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C2N2 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 9.8e-83 | 77.29 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MV PEEEIT+LFR+RKTV++MLKDRGY VGDFE+DMS+ QF NKFGENMKREDL INK+KRNNSSDQIY+FFPE PKVGI V TY+ RM SENV AI
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD--TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
VV++NLTPFA N I + +T +H+E+FQE+ELM+NIK+HVL+PEHQ L+DEEKKTLL RYTVKETQLPR+QV DPIA+YYG+KRGQVVKIIRPSETAGRY
Subjt: VVKVNLTPFALNLIRD--TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A2I4FCU5 DNA-directed RNA polymerases II and IV subunit 5A-like | 2.9e-82 | 77.67 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
M L EEEITRLFRIR+TVM+MLKDRGY VGDFEIDM+++QF NK+GE+MKREDL INK+KRNNSSDQIYIFFPE PKVG+ T+ TY +RM SENV AIL
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA + I + +T H+E+FQE+EL+INIK+HVLVPEHQ+L++EEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A5A7UJ12 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 9.8e-83 | 77.29 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MV PEEEIT+LFR+RKTV++MLKDRGY VGDFE+DMS+ QF NKFGENMKREDL INK+KRNNSSDQIY+FFPE PKVGI V TY+ RM SENV AI
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD--TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
VV++NLTPFA N I + +T +H+E+FQE+ELM+NIK+HVL+PEHQ L+DEEKKTLL RYTVKETQLPR+QV DPIA+YYG+KRGQVVKIIRPSETAGRY
Subjt: VVKVNLTPFALNLIRD--TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.2e-83 | 78.64 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MVL EEEITRLFR+RKTV++MLKDRGY VGDFE+DMSR+QF NK+GE+MKRED+ INKAKRN+SSDQIYIFFPE PKVG+ T+ TY RM SENV AIL
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA I + +T H+E+FQE+EL++NIKDHVLVPEHQLLS+EEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.2e-83 | 78.64 | Show/hide |
Query: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
MVL EEEITRLFR+RKTV++MLKDRGY VGDFE+DMSR+QF NK+GE+MKRED+ INKAKRN+SSDQIYIFFPE PKVG+ T+ TY RM SENV AIL
Subjt: MVLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAIL
Query: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFA I + +T H+E+FQE+EL++NIKDHVLVPEHQLLS+EEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.0e-49 | 49.51 | Show/hide |
Query: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
EEE RL++IRKT+M++ DRGY V E+D + ++F +FG+ +R DL + A ++ +DQ+++FFPE PKVGI T+ Y +RM EN++ A+
Subjt: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
Query: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A + D +V E F + EL+INI +H LVPEH +++ EE LL RY ++E+QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 1.0e-73 | 67.8 | Show/hide |
Query: VLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAILV
+L EEE+ RL+RI+KT+M+ML+DRGY + D E+ M++QQF+ K G+NMKREDL KAKRN++SDQ+YIFFP+ KVG+ T+ Y RM SENV AILV
Subjt: VLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAILV
Query: VKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
V+ NLTPFA I + ++ H+E+FQE+E+++NIK+HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQV DPIA+Y+G+KRGQVVKIIRPSETAGRYVT
Subjt: VKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.8e-48 | 48.54 | Show/hide |
Query: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
EEE RL++IRKT+M++ DRGY V E+D + ++F + G+ +R DL + A ++ +DQ+++FFPE PKVGI T+ Y +RM EN++ A+
Subjt: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
Query: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A + D ++ E F + EL+INI +H LVPEH +++ EE LL RY ++E QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.9e-49 | 49.03 | Show/hide |
Query: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
EEE RL++IRKT+M++ DRGY V E+D + ++F +FG+ +R DL + A ++ +DQ+++FFPE PKVGI T+ Y +RM EN++ A+
Subjt: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
Query: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A + D ++ E F + EL+INI +H LVPEH +++ EE LL RY ++E QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.0e-49 | 49.51 | Show/hide |
Query: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
EEE RL++IRKT+M++ DRGY V E+D + ++F +FG+ +R DL + A ++ +DQ+++FFPE PKVGI T+ Y +RM EN++ A+
Subjt: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGE-----NMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAI
Query: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A + D +V E F + EL+INI +H LVPEH +++ EE LL RY ++E+QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFALNLIRDTTTLHV-EIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 1.3e-31 | 37.69 | Show/hide |
Query: EITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMIS-ENVSSAILVVKVN
E + + R+T MEML+DRGY V D +I++S QQF +GE+ + L I+ R +SS +I + F V ++ + ++S EN++ ILV++ +
Subjt: EITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMIS-ENVSSAILVVKVN
Query: LTPFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
+T AL + + + VE+F+ ++L++N+ HVL P+HQ+L+D+EK++LL++++++E QLPR+ DPI +YYG++ GQV+K+ E + +VTYR V
Subjt: LTPFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 7.4e-75 | 67.8 | Show/hide |
Query: VLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAILV
+L EEE+ RL+RI+KT+M+ML+DRGY + D E+ M++QQF+ K G+NMKREDL KAKRN++SDQ+YIFFP+ KVG+ T+ Y RM SENV AILV
Subjt: VLPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVSSAILV
Query: VKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
V+ NLTPFA I + ++ H+E+FQE+E+++NIK+HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQV DPIA+Y+G+KRGQVVKIIRPSETAGRYVT
Subjt: VKVNLTPFALNLIRD-TTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 7.8e-24 | 34.33 | Show/hide |
Query: EITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVS--SAILVVKV
E R + R T EML+DRGY V + E+ ++ +F + FGE + E L I R++ +I + F + + +V L IS NV + ILV++
Subjt: EITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMISENVS--SAILVVKV
Query: NLTPFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
+ FA + T VE F +L++NI H+ P+ ++L+ EEK+ LL ++ +++ QLP +Q D +YYG+K+ QVVKI E G +VTYR +
Subjt: NLTPFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.2e-29 | 36.95 | Show/hide |
Query: LPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMIS-ENVSSAILV
L EE R + R+ ++ML+DRGY V D +I++S F +GE + L I+ R++S+ ++ I F V ++ + + + ++S E ++ ILV
Subjt: LPEEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENMKREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLKRMIS-ENVSSAILV
Query: VKVNLTPFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTY
++ ++T AL I + + VEIFQ ++L++NI H L P+HQ+L+DEEK TLL++++++E QLPRI D I +YYG+++GQVVK+ E +V +
Subjt: VKVNLTPFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 8.3e-42 | 42.72 | Show/hide |
Query: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENM---KREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLK-RMISENVSSAIL
++EITR+F++R+TV++ML+DRGY + + ++++ R++FV +F + M +E L ++ K N +D+IY+F+PE PKVG+ + + +M + V I+
Subjt: EEEITRLFRIRKTVMEMLKDRGYCVGDFEIDMSRQQFVNKFGENM---KREDLDINKAKRNNSSDQIYIFFPEAPKVGISTVGTYLK-RMISENVSSAIL
Query: VVKVNLT-PFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV + +T P + + L +E+F+E+EL+ NI +H LV ++ +L D+ KK LL YTV++TQLPRI V DP+A+YYG+KRGQVVKI R T+ Y
Subjt: VVKVNLT-PFALNLIRDTTTLHVEIFQESELMINIKDHVLVPEHQLLSDEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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