; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006380 (gene) of Chayote v1 genome

Gene IDSed0006380
OrganismSechium edule (Chayote v1)
Description3R-hydroxymyristoyl-dehydratase-hydroxymyristoyl ACP dehydrase isoform 1
Genome locationLG10:1420950..1423767
RNA-Seq ExpressionSed0006380
SyntenySed0006380
Gene Ontology termsGO:0005525 - GTP binding (molecular function)
InterPro domainsIPR011719 - Conserved hypothetical protein CHP02058
IPR037103 - Tubulin/FtsZ-like, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134667.1 uncharacterized protein LOC101216458 isoform X1 [Cucumis sativus]1.9e-7781.44Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S +LN  F  +TD R RSY LSNH SS S +LI S TRPR  RL+K TA SSMEVEQGG+SA V  + PPMKLLFVEMGVGYDQHGQDVTAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGV+FGEMKLQIKLGVP SLQQSLD+EKVKSVFPYGKILNV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

XP_008439752.1 PREDICTED: uncharacterized protein LOC103484457 isoform X1 [Cucumis melo]5.4e-7780.93Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S +LN  F  +TD R RSYP SNH SS   +LI S TRPR  RL+K TA SSMEVEQGG+SA V  + PPMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGV+FGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

XP_022925764.1 uncharacterized protein LOC111433074 [Cucurbita moschata]1.7e-8386.6Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S VLN  FP VTDLR RSYPLSN HSS+SA+LI S TRP   RLVK TAASSMEVEQGGKSA V GS PPMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKI+NV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

XP_023544561.1 uncharacterized protein LOC111804102 [Cucurbita pepo subsp. pepo]1.3e-8386.6Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S VLN  FP VTDLR RSYPLSN HSS+SA+LI S TRPR  RLVK TAASSMEVEQGGKSA V GS PPMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGVTF EMKLQIKLGVP SLQQSLDIEKVKSVFPYGKI+NV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

XP_038883708.1 uncharacterized protein LOC120074614 isoform X1 [Benincasa hispida]4.4e-7983.51Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S VLNP F  VTD R RSY LSN + S SA+LI S TRPR  RLVK TA SSMEVEQGGKSA    + PPMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

TrEMBL top hitse value%identityAlignment
A0A0A0KNJ4 Uncharacterized protein9.0e-7881.44Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S +LN  F  +TD R RSY LSNH SS S +LI S TRPR  RL+K TA SSMEVEQGG+SA V  + PPMKLLFVEMGVGYDQHGQDVTAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGV+FGEMKLQIKLGVP SLQQSLD+EKVKSVFPYGKILNV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

A0A1S3B079 uncharacterized protein LOC103484457 isoform X12.6e-7780.93Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S +LN  F  +TD R RSYP SNH SS   +LI S TRPR  RL+K TA SSMEVEQGG+SA V  + PPMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGV+FGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKILNV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

A0A6J1CMQ6 uncharacterized protein LOC111012382 isoform X17.6e-7780Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSN-HHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRA
        M  S V+N PFP   +LR RSY  SN + SS+SA+ + S TRP   RL+KATAASSMEVE+GG+SAAV  +  PMKLLFVEMGVGYDQHGQDVTAAAMRA
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSN-HHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRA

Query:  CRDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        CRDAI SNSIPAFRRGSIPGVTF +MKLQIKLGVPQ+LQQSLDIEKVKSVFPYGKILNV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  CRDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

A0A6J1ED44 uncharacterized protein LOC1114330748.4e-8486.6Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S VLN  FP VTDLR RSYPLSN HSS+SA+LI S TRP   RLVK TAASSMEVEQGGKSA V GS PPMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        RDAI SNSIPAFRRGSIPGVTFGEMKLQIKLGVP SLQQSLDIEKVKSVFPYGKI+NV+VVDGGLICSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

A0A6J1ILT2 uncharacterized protein LOC1114776238.7e-7371.05Show/hide
Query:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC
        M  S VLN  FP VTDLR RSYPLSN HSS+SA+LI S TRPR  RLVK TAASSMEVEQGGKSA V GS  PMKLLFVEMGVGYDQHGQD+TAAAMRAC
Subjt:  MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRAC

Query:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLD---------------------------IEKVKSVF-------PYGKILNVDVVDGGLI
        RDAI SNSIPAFRRGSIPGVTFGEMKLQIKLGVP SLQQSLD                            E+  S         P GKI+NVDVVDGGLI
Subjt:  RDAICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLD---------------------------IEKVKSVF-------PYGKILNVDVVDGGLI

Query:  CSSGVLVEEMGDKNDECYIVNAAVYVGY
        CSSGV VEEMGDKND+CYIVNAAVYVGY
Subjt:  CSSGVLVEEMGDKNDECYIVNAAVYVGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29040.1 unknown protein2.1e-5862.3Show/hide
Query:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA
        +  +LR+R  P     SS+    + S ++       P+  R +K  A S+ME      +  ++G  P   MKLLFVEMGVGYDQHGQDVT+AAM+AC++A
Subjt:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA

Query:  ICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        I SNSIPAFRRGSIPGV+FGEMKLQIKLGVP SL Q LD++KVKS+FPYGKI+NV+VVDGGLICSSGVLVEEMGD N++CYIVN AVYVGY
Subjt:  ICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

AT1G29040.2 unknown protein3.3e-4856.02Show/hide
Query:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA
        +  +LR+R  P     SS+    + S ++       P+  R +K  A S+ME      +  ++G  P   MKLLFVEMGVGYDQHGQDVT+AAM+AC   
Subjt:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA

Query:  ICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
                    SIPGV+FGEMKLQIKLGVP SL Q LD++KVKS+FPYGKI+NV+VVDGGLICSSGVLVEEMGD N++CYIVN AVYVGY
Subjt:  ICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY

AT1G29040.3 unknown protein3.0e-1746.9Show/hide
Query:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA
        +  +LR+R  P     SS+    + S ++       P+  R +K  A S+ME      +  ++G  P   MKLLFVEMGVGYDQHGQDVT+AAM+AC++A
Subjt:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA

Query:  ICSNSIPAFRRGS
        I SNSIPAFRRG+
Subjt:  ICSNSIPAFRRGS

AT1G29040.4 unknown protein2.1e-5862.3Show/hide
Query:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA
        +  +LR+R  P     SS+    + S ++       P+  R +K  A S+ME      +  ++G  P   MKLLFVEMGVGYDQHGQDVT+AAM+AC++A
Subjt:  LVTDLRVRSYPLSNHHSSTSANLIVSSTR-------PRNYRLVKATAASSMEVEQGGKSAAVSGSDP--PMKLLFVEMGVGYDQHGQDVTAAAMRACRDA

Query:  ICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY
        I SNSIPAFRRGSIPGV+FGEMKLQIKLGVP SL Q LD++KVKS+FPYGKI+NV+VVDGGLICSSGVLVEEMGD N++CYIVN AVYVGY
Subjt:  ICSNSIPAFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCCACAGTCCTAAATCCGCCATTTCCATTGGTAACCGATCTTAGGGTTCGTTCTTACCCTCTTTCGAATCATCATTCTTCAACATCTGCAAATTTGATCGT
CTCTTCTACACGCCCTCGAAATTATCGCCTTGTCAAAGCCACAGCTGCGTCGTCCATGGAGGTCGAGCAAGGTGGAAAATCCGCAGCTGTTAGCGGCTCAGATCCGCCCA
TGAAGCTCTTGTTTGTCGAGATGGGTGTTGGCTACGATCAACACGGACAAGATGTTACGGCAGCTGCAATGCGGGCCTGCAGGGATGCCATATGTTCCAATTCGATTCCA
GCATTCCGTAGAGGTTCCATTCCTGGAGTCACATTTGGAGAGATGAAACTACAGATCAAACTTGGAGTTCCACAGTCTCTTCAACAATCCTTGGATATCGAAAAAGTCAA
ATCCGTGTTCCCATATGGAAAAATTTTGAATGTTGACGTTGTCGATGGTGGCTTAATATGCTCTAGCGGTGTGCTTGTGGAAGAAATGGGAGACAAAAATGATGAGTGTT
ACATAGTAAATGCTGCTGTTTATGTTGGCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCTCCACAGTCCTAAATCCGCCATTTCCATTGGTAACCGATCTTAGGGTTCGTTCTTACCCTCTTTCGAATCATCATTCTTCAACATCTGCAAATTTGATCGT
CTCTTCTACACGCCCTCGAAATTATCGCCTTGTCAAAGCCACAGCTGCGTCGTCCATGGAGGTCGAGCAAGGTGGAAAATCCGCAGCTGTTAGCGGCTCAGATCCGCCCA
TGAAGCTCTTGTTTGTCGAGATGGGTGTTGGCTACGATCAACACGGACAAGATGTTACGGCAGCTGCAATGCGGGCCTGCAGGGATGCCATATGTTCCAATTCGATTCCA
GCATTCCGTAGAGGTTCCATTCCTGGAGTCACATTTGGAGAGATGAAACTACAGATCAAACTTGGAGTTCCACAGTCTCTTCAACAATCCTTGGATATCGAAAAAGTCAA
ATCCGTGTTCCCATATGGAAAAATTTTGAATGTTGACGTTGTCGATGGTGGCTTAATATGCTCTAGCGGTGTGCTTGTGGAAGAAATGGGAGACAAAAATGATGAGTGTT
ACATAGTAAATGCTGCTGTTTATGTTGGCTACTAA
Protein sequenceShow/hide protein sequence
MAVSTVLNPPFPLVTDLRVRSYPLSNHHSSTSANLIVSSTRPRNYRLVKATAASSMEVEQGGKSAAVSGSDPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAICSNSIP
AFRRGSIPGVTFGEMKLQIKLGVPQSLQQSLDIEKVKSVFPYGKILNVDVVDGGLICSSGVLVEEMGDKNDECYIVNAAVYVGY