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Sed0006384 (gene) of Chayote v1 genome

Gene IDSed0006384
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG10:37675366..37677038
RNA-Seq ExpressionSed0006384
SyntenySed0006384
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592381.1 hypothetical protein SDJN03_14727, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3672.44Show/hide
Query:  ISPNFGEFMLLEEVAEIGEGMSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKD-DSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKK
        I+PN  +F+LL+++AEIGEGMSRSQ+  SLQFL FL S  LH  SVLA ++SSA++ D K KK D  RS SMGIKI+LI LGVVTVIAF+VIL KIWQ+K
Subjt:  ISPNFGEFMLLEEVAEIGEGMSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKD-DSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKK

Query:  KREEQHARLLKLFEDDDELEVELGLRD
        KREEQHARLLKLFEDDDELE+ELGLRD
Subjt:  KREEQHARLLKLFEDDDELEVELGLRD

KAG7037155.1 hypothetical protein SDJN02_00777, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-3774.8Show/hide
Query:  NFGEFMLLEEVAEIGEGMSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREE
        N  + +LLE+ AEIGEGMSRS++  SLQFL FLLS  LH  SVLAGD+SSAK D KTKK D+ +S S GIK+L+I LGVVT IAF+VILFK+WQKKKREE
Subjt:  NFGEFMLLEEVAEIGEGMSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREE

Query:  QHARLLKLFEDDDELEVELGLRD
        QHARLLKLFEDDDELEVELGLRD
Subjt:  QHARLLKLFEDDDELEVELGLRD

KGN52701.1 hypothetical protein Csa_009261 [Cucumis sativus]7.8e-3480.37Show/hide
Query:  MSRSQTPTSLQFLFFLLSFLL-HCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQ+  SLQFLFF+ SF+  H  SVLA +NSSAKD  KTKKDD+RRS SMGIKIL+I LGVVTVI F+VILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQTPTSLQFLFFLLSFLL-HCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_008459655.1 PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]4.1e-3583.18Show/hide
Query:  MSRSQTPTSLQFLFFLLSFL-LHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQ+  SLQFLFFL +F+ LH  SVLA DNSSAKD  KTKKDD RRS SMGIKIL+I LGVVTVIAF+VILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQTPTSLQFLFFLLSFL-LHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_038890666.1 uncharacterized protein LOC120080166 [Benincasa hispida]6.6e-3378.3Show/hide
Query:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEV
        MS SQ+  SLQFLFF+    LH  SVLA D+SSAKD  K+KKDD+RRS SM IKI++I LGVVTVIAF+VILFKIWQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ0 Uncharacterized protein3.8e-3480.37Show/hide
Query:  MSRSQTPTSLQFLFFLLSFLL-HCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQ+  SLQFLFF+ SF+  H  SVLA +NSSAKD  KTKKDD+RRS SMGIKIL+I LGVVTVI F+VILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQTPTSLQFLFFLLSFLL-HCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A1S3CA76 uncharacterized protein LOC1034987102.0e-3583.18Show/hide
Query:  MSRSQTPTSLQFLFFLLSFL-LHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQ+  SLQFLFFL +F+ LH  SVLA DNSSAKD  KTKKDD RRS SMGIKIL+I LGVVTVIAF+VILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQTPTSLQFLFFLLSFL-LHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A5A7TC90 Uncharacterized protein2.0e-3583.18Show/hide
Query:  MSRSQTPTSLQFLFFLLSFL-LHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQ+  SLQFLFFL +F+ LH  SVLA DNSSAKD  KTKKDD RRS SMGIKIL+I LGVVTVIAF+VILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQTPTSLQFLFFLLSFL-LHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A6J1EBZ0 uncharacterized protein LOC1114326782.8e-2974.77Show/hide
Query:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKD-DSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE
        MSRSQ+  SLQFL FL S  LH  SVLA ++SSA++ D K KK D  RS SMGIKI+LI LGVVTVIAF+VIL KIWQ+KKREEQHARLLKLFEDDDELE
Subjt:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKD-DSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        +ELGLRD
Subjt:  VELGLRD

A0A6J1GB46 uncharacterized protein LOC1114525613.3e-3076.42Show/hide
Query:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEV
        MSRS++  SLQ L FLLS  LH  SVLAGD+SSAK D KTKK D+ +S S GIK+L+I LGVVT IAF VILFK+WQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein2.1e-1651.06Show/hide
Query:  LFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        L F  S  L     L+GD+ +     KT+   S  S+  G K++L+ +G V V  F+  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  LFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.1 unknown protein7.8e-1646.23Show/hide
Query:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEV
        +S S    S   L    S  LH    ++GD +S+   +K +   S  S+  G K++ I LG   V   +  L+K+WQKKKR+EQ+ARLLKLFE+DDELEV
Subjt:  MSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

AT1G57765.2 unknown protein8.7e-1547.31Show/hide
Query:  FFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F  + +L      ++GD +S+   +K +   S  S+  G K++ I LG   V   +  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  FFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT3G53490.1 unknown protein4.9e-1040.86Show/hide
Query:  FLLSFLLH-CSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F  +FL H CS V AG N     +S T+K++ +     GI +L++ L +  V    ++ +K W+KKKR+++ AR LKLFED D++E ELGL +
Subjt:  FLLSFLLH-CSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIFLGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTGGTGCGGTTACCGCTACGCCCAAGTCCCTGAATGGGCATAGAAATAATAAAATAAAGAGCGAAAAATTCGGGTACTTTGAATCAATATCTCCCAATTTCGG
CGAATTCATGTTGTTGGAAGAAGTTGCAGAGATCGGCGAAGGGATGTCTCGATCTCAAACCCCCACATCTCTGCAATTCCTCTTCTTCCTTTTATCTTTCCTTCTCCATT
GTTCTTCAGTGTTGGCAGGTGATAATTCAAGCGCTAAAGATGATAGTAAAACTAAAAAGGATGATTCTCGGAGGAGTACATCGATGGGGATCAAGATACTACTCATATTT
TTAGGAGTGGTCACTGTCATTGCCTTTGCTGTAATTTTGTTCAAGATATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAGCTTTTTGAAGATGATGA
TGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTATAAAAATCATTGAAAACATTGAATGAAGTTTGGTGCGGTTACCGCTACGCCCAAGTCCCTGAATGGGCATAGAAATAATAAAATAAAGAGCGAAAAATTCGGGT
ACTTTGAATCAATATCTCCCAATTTCGGCGAATTCATGTTGTTGGAAGAAGTTGCAGAGATCGGCGAAGGGATGTCTCGATCTCAAACCCCCACATCTCTGCAATTCCTC
TTCTTCCTTTTATCTTTCCTTCTCCATTGTTCTTCAGTGTTGGCAGGTGATAATTCAAGCGCTAAAGATGATAGTAAAACTAAAAAGGATGATTCTCGGAGGAGTACATC
GATGGGGATCAAGATACTACTCATATTTTTAGGAGTGGTCACTGTCATTGCCTTTGCTGTAATTTTGTTCAAGATATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCC
GTCTTCTCAAGCTTTTTGAAGATGATGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGAGCTCCCTGATACTCTTCCATCGTCCTCTACATCCGACAAATTAAGACG
AGGTGCACAGTGTGGATTACGTTGCCTTTTGTTTAATGATGTATACACGCTTTGATATCTTATCCCAATTTTGTTTTGGATAAGCTGAGCTGGTAAAATCATAGCAAATT
CTTTCTTGTCAATTAGTTTTGAATATTGTTGTTGCTTCTTCAATCATTCATCTTATACTTGTTTATGATCTCTGGGGTATGTCTCAAATATAAATCGTTGTTTAGTGAAT
TAGTCATACTGGAAAAAACATGTTCTTCTTTTTAGGGGGCGAGAAAAAAAAAACACCTTATTATCATACTTAATATGTTTCTA
Protein sequenceShow/hide protein sequence
MKFGAVTATPKSLNGHRNNKIKSEKFGYFESISPNFGEFMLLEEVAEIGEGMSRSQTPTSLQFLFFLLSFLLHCSSVLAGDNSSAKDDSKTKKDDSRRSTSMGIKILLIF
LGVVTVIAFAVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD