; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006435 (gene) of Chayote v1 genome

Gene IDSed0006435
OrganismSechium edule (Chayote v1)
DescriptionHigh mobility group B protein 6
Genome locationLG14:5709202..5710640
RNA-Seq ExpressionSed0006435
SyntenySed0006435
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025412.1 high mobility group B protein 6 [Cucumis melo var. makuwa]9.9e-7784.29Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL +P+D+PL SGRRPLQPKNSLPNP P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
XP_004142680.1 high mobility group B protein 6 [Cucumis sativus]1.3e-7684.82Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPP--IQKIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL  P+DLPL SGRRPLQPKNSLPNP P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPP--IQKIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
XP_008463266.1 PREDICTED: high mobility group B protein 6 [Cucumis melo]1.4e-7583.77Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL +P+D+PL SGRRPLQPKNSLPN  P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
XP_022978293.1 high mobility group B protein 13-like [Cucurbita maxima]4.6e-7480.83Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPERIGIS--GDANKENQPPIQ----KIELCDLSLADELSAVKKKIERLRLDGERTEK
        +QALH PLATP DLPL SGRRPLQPKNSLPNP PAVAK+ KS PERI IS   DANKEN PPI      +E CDLSLADEL+AVK+K+ERLRL+ ERTE+
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPERIGIS--GDANKENQPPIQ----KIELCDLSLADELSAVKKKIERLRLDGERTEK

Query:  MLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        ML+ERD++ ELRMKE+LQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFV GF
Subjt:  MLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
XP_038883293.1 uncharacterized protein LOC120074285 [Benincasa hispida]2.4e-7581.73Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPER--IGISGDANKENQPPIQ--------KIELCDLSLADELSAVKKKIERLRLDGE
        +Q LH PLATPQDLPL SGRRPLQPKNSLPN  P+VAK  KS PER  I +SGDANKEN PPI          IE CD SLADEL+AVK+K+ERLRLDGE
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPER--IGISGDANKENQPPIQ--------KIELCDLSLADELSAVKKKIERLRLDGE

Query:  RTEKMLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RTE+MLRERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDS+ FV GF
Subjt:  RTEKMLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
TrEMBL top hitse value%identityAlignment
A0A0A0L063 Uncharacterized protein6.3e-7784.82Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPP--IQKIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL  P+DLPL SGRRPLQPKNSLPNP P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPP--IQKIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
A0A1S3CJ78 high mobility group B protein 67.0e-7683.77Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL +P+D+PL SGRRPLQPKNSLPN  P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
A0A5A7SJQ2 High mobility group B protein 64.8e-7784.29Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL +P+D+PL SGRRPLQPKNSLPNP P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
A0A5D3CEI7 High mobility group B protein 67.0e-7683.77Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML
        +Q LH PL +P+D+PL SGRRPLQPKNSLPN  P+VAKI KS PE  +I +SGDANKEN PP     IE CDLSLADEL+AVK+K+ERLRLDGERTEKML
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPE--RIGISGDANKENQPPIQ--KIELCDLSLADELSAVKKKIERLRLDGERTEKML

Query:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        RERDLV ELRMKE+LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFV GF
Subjt:  RERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
A0A6J1ISM0 high mobility group B protein 13-like2.2e-7480.83Show/hide
Query:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPERIGIS--GDANKENQPPIQ----KIELCDLSLADELSAVKKKIERLRLDGERTEK
        +QALH PLATP DLPL SGRRPLQPKNSLPNP PAVAK+ KS PERI IS   DANKEN PPI      +E CDLSLADEL+AVK+K+ERLRL+ ERTE+
Subjt:  LQALHLPLATPQDLPLNSGRRPLQPKNSLPNPPPAVAKIAKSNPERIGIS--GDANKENQPPIQ----KIELCDLSLADELSAVKKKIERLRLDGERTEK

Query:  MLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
        ML+ERD++ ELRMKE+LQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFV GF
Subjt:  MLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein2.6e-2245.81Show/hide
Query:  SGRRPLQPKNSLPNPPPAVAKIAKSNPERIGISGDANKENQPPIQKIELCDLSLADELSAVKKKIERLRLDGERTEKMLRERDLVFELRMKEILQRSQEQ
        SGR+ LQP+N    P      +     E++       KEN   +      D SLA+ELSA KKK+ERLR D E TEK+L+ERD   +L M  +LQR + Q
Subjt:  SGRRPLQPKNSLPNPPPAVAKIAKSNPERIGISGDANKENQPPIQKIELCDLSLADELSAVKKKIERLRLDGERTEKMLRERDLVFELRMKEILQRSQEQ

Query:  RDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV
        + LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++      F   E  D E SV
Subjt:  RDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV
AT5G01910.2 unknown protein1.3e-2147.79Show/hide
Query:  SGRRPLQPKNSLPNPPPAVAKIAKSNPERIGISGDANKENQPPIQKIELCDLSLADELSAVKKKIERLRLDGERTEKMLRERDLVFELRMKEILQRSQEQ
        SGR+ LQP+N    P      +     E++       KEN   +      D SLA+ELSA KKK+ERLR D E TEK+L+ERD   +L M  +LQR + Q
Subjt:  SGRRPLQPKNSLPNPPPAVAKIAKSNPERIGISGDANKENQPPIQKIELCDLSLADELSAVKKKIERLRLDGERTEKMLRERDLVFELRMKEILQRSQEQ

Query:  RDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK
        + LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++
Subjt:  RDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGACCCGACCCGACTCGACCCAACTAGGTGGCAATATTTGTCATTCCCTAACATAAAGGCAAGCAATACAAAAAAGAAAAGGTTAATATTAAATAAAGTAGCCGT
TGGCGCCTGTCAACATTCAAATTCAAACCCTAAAAAAAACAAAAACAAAAACCAAATCCTTCCAAAACAAAAAAAAAAACCTCTGACTCTTCACTTTTCTATGCTCCATC
CATTTCCAAACACAAAATTCTTCATCTCCACCAATATGCTGCAAGCTCTCCATCTTCCCTTAGCCACACCTCAAGATCTTCCTCTCAATTCCGGCCGCCGCCCGCTCCAA
CCGAAAAACTCCCTTCCAAATCCTCCACCTGCCGTCGCCAAAATCGCCAAATCCAACCCGGAACGGATCGGGATCTCTGGCGACGCGAACAAGGAGAATCAACCGCCGAT
TCAGAAAATCGAGTTGTGCGATTTGTCGCTGGCGGATGAACTCAGTGCGGTGAAGAAGAAGATCGAGAGGTTGAGATTGGACGGTGAACGAACCGAGAAGATGCTGAGAG
AGAGGGATTTGGTGTTTGAGTTACGGATGAAGGAGATTTTGCAGAGAAGTCAGGAGCAGAGAGATCTGGAAATGGAGGTGGATCGGTTGTTCAGATTGAAGGAACTCAGA
TCTTACTGTATGAGAATTTCACCGATTCGAAGTCTGAGAGAGAAAGAGCGAGAGAAGATCTTCACCGACGCACAATTTCCGGAATTTGAGATCGGCGACGGAGAAGAATC
GGTCGGCGAGAATTCATCGTTAGATTCATCAGAATTCGTCGCAGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAACAAATTGGCAAATTGACCAACTCAAACATTTGGATTGATTCAAAAAACTATCCTAATTCAATCCTATCCAAACCATGTTCGACCCGACCCGACTCGACCCAACT
AGGTGGCAATATTTGTCATTCCCTAACATAAAGGCAAGCAATACAAAAAAGAAAAGGTTAATATTAAATAAAGTAGCCGTTGGCGCCTGTCAACATTCAAATTCAAACCC
TAAAAAAAACAAAAACAAAAACCAAATCCTTCCAAAACAAAAAAAAAAACCTCTGACTCTTCACTTTTCTATGCTCCATCCATTTCCAAACACAAAATTCTTCATCTCCA
CCAATATGCTGCAAGCTCTCCATCTTCCCTTAGCCACACCTCAAGATCTTCCTCTCAATTCCGGCCGCCGCCCGCTCCAACCGAAAAACTCCCTTCCAAATCCTCCACCT
GCCGTCGCCAAAATCGCCAAATCCAACCCGGAACGGATCGGGATCTCTGGCGACGCGAACAAGGAGAATCAACCGCCGATTCAGAAAATCGAGTTGTGCGATTTGTCGCT
GGCGGATGAACTCAGTGCGGTGAAGAAGAAGATCGAGAGGTTGAGATTGGACGGTGAACGAACCGAGAAGATGCTGAGAGAGAGGGATTTGGTGTTTGAGTTACGGATGA
AGGAGATTTTGCAGAGAAGTCAGGAGCAGAGAGATCTGGAAATGGAGGTGGATCGGTTGTTCAGATTGAAGGAACTCAGATCTTACTGTATGAGAATTTCACCGATTCGA
AGTCTGAGAGAGAAAGAGCGAGAGAAGATCTTCACCGACGCACAATTTCCGGAATTTGAGATCGGCGACGGAGAAGAATCGGTCGGCGAGAATTCATCGTTAGATTCATC
AGAATTCGTCGCAGGTTTTTGAAATCGTTCTTGATTTTGTCCTAATTTTTCGATTACTTCTTCTACTACTGTTCTTCATCAATTCAGTGATTCAAAGGAAGAAAAAGAAA
TTAATGTAATACCTCATTATGTTCTATGCTTTGAGTTGTAATCAATCTTCTTCTTCTTCTTCTTCACTTCATTTAATGTCTGAAAATGAAGAAATTTTGAAATCAATGTC
TGTTCATGATTCTTCTCTCATCGCCA
Protein sequenceShow/hide protein sequence
MFDPTRLDPTRWQYLSFPNIKASNTKKKRLILNKVAVGACQHSNSNPKKNKNKNQILPKQKKKPLTLHFSMLHPFPNTKFFISTNMLQALHLPLATPQDLPLNSGRRPLQ
PKNSLPNPPPAVAKIAKSNPERIGISGDANKENQPPIQKIELCDLSLADELSAVKKKIERLRLDGERTEKMLRERDLVFELRMKEILQRSQEQRDLEMEVDRLFRLKELR
SYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVAGF