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Sed0006483 (gene) of Chayote v1 genome

Gene IDSed0006483
OrganismSechium edule (Chayote v1)
DescriptionProtein TIC 214
Genome locationContig00297:84112..85555
RNA-Seq ExpressionSed0006483
SyntenySed0006483
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AOV83520.1 Ycf1 [Glycyrrhiza glabra]1.3e-1775Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
QJC13097.1 hypothetical chloroplast RF19 [Glycyrrhiza inflata]1.3e-1775Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
QJQ75665.1 hypothetical chloroplast RF19 [Glycyrrhiza echinata]1.3e-1775Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
YP_009766299.1 Ycf1 [Acacia podalyriifolia]1.3e-1779.69Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHL----CNDKTQKYYL
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTIT +ALP  L    CND   K+ L
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHL----CNDKTQKYYL
YP_009828130.1 hypothetical chloroplast RF19 [Glycyrrhiza aspera]1.3e-1775Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
TrEMBL top hitse value%identityAlignment
A0A6M4E446 Protein TIC 2146.5e-1875Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
A0A6M4EAJ0 Protein TIC 2146.5e-1875Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
A0A6M4EBW8 Protein TIC 2146.5e-1875Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
A0A6M4ECK1 Protein TIC 2146.5e-1875Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
A0A6M4ECN4 Protein TIC 2146.5e-1875Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K++L +  +P
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKYYLPKIYDP
SwissProt top hitse value%identityAlignment
A0A393 Protein TIC 2142.5e-19100Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
A6MM95 Protein TIC 2142.5e-19100Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Q2MIC9 Protein TIC 2142.5e-19100Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Q2MIC9 Protein TIC 2141.6e-0556.76Show/hide
Query:  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI
        ++ +L   T LCND T+K Y+PK+YDPLL+GPYR  I
Subjt:  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI
Q33BW4 Protein TIC 2142.5e-19100Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Q33BW4 Protein TIC 2141.2e-0556.76Show/hide
Query:  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI
        ++ +L   T LCND T+K Y+PK+YDPLL+GPYR  I
Subjt:  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI
Q3C1P6 Protein TIC 2142.5e-19100Show/hide
Query:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Q3C1P6 Protein TIC 2141.2e-0556.76Show/hide
Query:  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI
        ++ +L   T LCND T+K Y+PK+YDPLL+GPYR  I
Subjt:  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI
Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein2.6e-1997.83Show/hide
Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
ATCG01000.1 Ycf1 protein2.6e-1997.83Show/hide
Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
ATCG01130.1 Ycf1 protein2.6e-1997.83Show/hide
Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
ATMG00370.1 Ycf1 protein2.6e-1997.83Show/hide
Query:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
        EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Subjt:  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGGAACTGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAG
ACCTCATACAATAACTGTCCTAGCTCTACCGACTCATTTATGTAATGATAAAACTCAAAAGTACTATTTACCAAAAATATATGATCCTTTGTTGAGCGGCCCTTACCGCA
AACGAATCCTTTTTTTTTTTTTCATTGAGAATGAAAAAAAAAACTTCTATAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGGAACTGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAG
ACCTCATACAATAACTGTCCTAGCTCTACCGACTCATTTATGTAATGATAAAACTCAAAAGTACTATTTACCAAAAATATATGATCCTTTGTTGAGCGGCCCTTACCGCA
AACGAATCCTTTTTTTTTTTTTCATTGAGAATGAAAAAAAAAACTTCTATAAAAAATGA
Protein sequenceShow/hide protein sequence
MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRILFFFFIENEKKNFYKK