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Sed0006491 (gene) of Chayote v1 genome

Gene IDSed0006491
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein 6-like
Genome locationLG09:36931932..36932540
RNA-Seq ExpressionSed0006491
SyntenySed0006491
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046676.1 zinc finger protein 6-like [Cucumis melo var. makuwa]6.1e-5872.88Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT
        MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT

Query:  NI------GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS
        N       GGGGGSR+LPR+G GYFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Subjt:  NI------GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS

KAG7025578.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-5771.84Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFH------------AAAALRPP
        MSNQNPSSILKLFGFPLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALGGHQNAHKRERQRAKRA+YFH            AA ALRPP
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFH------------AAAALRPP

Query:  QIYSTGFPTNIGGG-GGSRLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG
          YS+ FP NIGGG  G R LPRS  GYF  AAYGGV AGSGRWMFGNSGE   + S + VGVVDLHLKLSPSG
Subjt:  QIYSTGFPTNIGGG-GGSRLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG

XP_008451655.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]2.8e-5874.14Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT
        MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT

Query:  NI---GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS
        N    GGGGGSR+LPR+G GYFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Subjt:  NI---GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS

XP_023004876.1 zinc finger protein GIS3-like [Cucurbita maxima]1.0e-5773.37Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGF
        MSNQNPS+ILKLFGFPLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALGGHQNAHKRERQRAKRA+YFHA     AAALRPP  YS+ F
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGF

Query:  PTNIGGGGGS---RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG
        P +IGGGGG    R LPRS  GYF  AAYGGV AGSGRWMFGNSGE   + S + V VVDLHLKLSPSG
Subjt:  PTNIGGGGGS---RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG

XP_023514545.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]8.9e-5772.78Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGF
        MSNQNPSSILKLFG PLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALGGHQNAHKRERQRAKRA+YFHA     AAALRP   YS+ F
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGF

Query:  PTNIGGGGGS---RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG
        P NIGGGGG    R +PRS  GYF  AAYGGV  GSGRWMFGNSGE   + S + VGVVDLHLKLSPSG
Subjt:  PTNIGGGGGS---RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5R1 C2H2-type domain-containing protein1.9e-5270.35Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDAN-SDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNI
        MSN NPSSILKLFGFPLVEHDD  PE   G    D   S+DD+KFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+NI
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDAN-SDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNI

Query:  GG-GGGSRLLPR--SGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS
        GG GG SR+L R  +  GYF   AAYGGV A SGRWMFGNS E  ME S  ++G      VDLHLKLSPS S
Subjt:  GG-GGGSRLLPR--SGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS

A0A1S3BSU1 zinc finger protein 6-like1.3e-5874.14Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT
        MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT

Query:  NI---GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS
        N    GGGGGSR+LPR+G GYFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Subjt:  NI---GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS

A0A5D3D1T3 Zinc finger protein 6-like3.0e-5872.88Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT
        MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPT

Query:  NI------GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS
        N       GGGGGSR+LPR+G GYFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Subjt:  NI------GGGGGSRLLPRSGKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS

A0A6J1DIE9 zinc finger protein GIS3-like5.4e-5269.71Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALR-------PPQ-IYS
        MSNQNPSSILKLFGFPLV+HDD++PE   G      NSDDD+KFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA+YFH A ALR       PPQ +YS
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALR-------PPQ-IYS

Query:  TGFPTNI---GGGGG----SRLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPS
          F  NI   GGGGG    SR LPR   GYF AAAYG V A SGRW+FGNSGE   + S + VGVVDLHLKLSPS
Subjt:  TGFPTNI---GGGGG----SRLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPS

A0A6J1KTC7 zinc finger protein GIS3-like5.1e-5873.37Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGF
        MSNQNPS+ILKLFGFPLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALGGHQNAHKRERQRAKRA+YFHA     AAALRPP  YS+ F
Subjt:  MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGF

Query:  PTNIGGGGGS---RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG
        P +IGGGGG    R LPRS  GYF  AAYGGV AGSGRWMFGNSGE   + S + V VVDLHLKLSPSG
Subjt:  PTNIGGGGGS---RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 81.6e-0849.28Show/hide
Query:  DGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---AIYFHAAAALRPPQIYSTGFPTN
        D D +++++++F C +C R F  SQALGGHQNAHKRERQ AKR     Y H      P  IY  GF  N
Subjt:  DGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---AIYFHAAAALRPPQIYSTGFPTN

Q39265 Zinc finger protein 62.0e-1151.43Show/hide
Query:  SSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +S LKLFG  L+E   +Q         G  +  + +K+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q42485 Zinc finger protein 17.9e-0849.09Show/hide
Query:  DDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTG
        D + F C +C+R F +SQALGGHQNAHKRER  AKR  Y+    +  P   ++ G
Subjt:  DDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTG

Q9C9H1 Zinc finger protein GIS31.7e-1041.41Show/hide
Query:  SNQNPSSILKLFGFPLVEHDD------------IQPEMG----------GGG--NDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        S++  +S LKLFGF +   +D            + PE G          GGG  + G      ++K+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  SNQNPSSILKLFGFPLVEHDD------------IQPEMG----------GGG--NDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q9FG05 Zinc finger protein GIS21.2e-0844.16Show/hide
Query:  LKLFGFPL-VEHDDIQPEMGGGGNDGDANSDD-DKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAA
        ++LFGF     H++ + +     N+     D+ +K+F+C +C R F  SQALGGHQNAHKRERQ+ KR      AAA
Subjt:  LKLFGFPL-VEHDDIQPEMGGGGNDGDANSDD-DKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAA

Arabidopsis top hitse value%identityAlignment
AT1G67030.1 zinc finger protein 61.4e-1251.43Show/hide
Query:  SSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +S LKLFG  L+E   +Q         G  +  + +K+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1141.41Show/hide
Query:  SNQNPSSILKLFGFPLVEHDD------------IQPEMG----------GGG--NDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        S++  +S LKLFGF +   +D            + PE G          GGG  + G      ++K+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Subjt:  SNQNPSSILKLFGFPLVEHDD------------IQPEMG----------GGG--NDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT1G80730.1 zinc-finger protein 15.6e-0949.09Show/hide
Query:  DDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTG
        D + F C +C+R F +SQALGGHQNAHKRER  AKR  Y+    +  P   ++ G
Subjt:  DDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTG

AT2G41940.1 zinc finger protein 81.1e-0949.28Show/hide
Query:  DGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---AIYFHAAAALRPPQIYSTGFPTN
        D D +++++++F C +C R F  SQALGGHQNAHKRERQ AKR     Y H      P  IY  GF  N
Subjt:  DGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---AIYFHAAAALRPPQIYSTGFPTN

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein8.7e-1044.16Show/hide
Query:  LKLFGFPL-VEHDDIQPEMGGGGNDGDANSDD-DKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAA
        ++LFGF     H++ + +     N+     D+ +K+F+C +C R F  SQALGGHQNAHKRERQ+ KR      AAA
Subjt:  LKLFGFPL-VEHDDIQPEMGGGGNDGDANSDD-DKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCAAAACCCCTCTTCCATTCTAAAGCTATTTGGATTCCCGCTGGTAGAACACGACGACATTCAGCCGGAAATGGGCGGCGGCGGAAACGACGGCGACGCCAA
CTCCGACGACGACAAAAAATTCCGGTGCCAATTCTGCCGCCGTGTGTTCGCCAACTCGCAAGCTCTCGGAGGGCATCAAAATGCCCACAAGAGAGAGCGCCAAAGGGCCA
AACGCGCCATTTATTTCCACGCCGCCGCCGCACTCCGGCCGCCGCAGATTTACTCAACCGGTTTCCCGACCAACATCGGCGGCGGCGGCGGCTCTCGCCTTCTGCCTCGG
AGCGGTAAAGGCTACTTTGCGGCGGCGGCGTACGGAGGCGTACCGGCGGGGTCAGGGCGGTGGATGTTTGGAAATTCCGGCGAAGTGAAAATGGAAATTTCAAAAGAGCA
AGTGGGTGTTGTTGATCTTCATCTTAAACTCTCTCCATCTGGTTCATGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAACAATAAGCAACAAAAAAAAAACAAAAACATATTTTGCAGTGTCCAATAAAATGTCCAATCAAAACCCCTCTTCCATTCTAAAGCTATTTGGATTCCCGCTGG
TAGAACACGACGACATTCAGCCGGAAATGGGCGGCGGCGGAAACGACGGCGACGCCAACTCCGACGACGACAAAAAATTCCGGTGCCAATTCTGCCGCCGTGTGTTCGCC
AACTCGCAAGCTCTCGGAGGGCATCAAAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCATTTATTTCCACGCCGCCGCCGCACTCCGGCCGCCGCAGATTTA
CTCAACCGGTTTCCCGACCAACATCGGCGGCGGCGGCGGCTCTCGCCTTCTGCCTCGGAGCGGTAAAGGCTACTTTGCGGCGGCGGCGTACGGAGGCGTACCGGCGGGGT
CAGGGCGGTGGATGTTTGGAAATTCCGGCGAAGTGAAAATGGAAATTTCAAAAGAGCAAGTGGGTGTTGTTGATCTTCATCTTAAACTCTCTCCATCTGGTTCATGAATT
TTAATTTAATTAATGTCTCTAACTTTATGAACATCAAGACCAATTAATGATGAATTAGA
Protein sequenceShow/hide protein sequence
MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNIGGGGGSRLLPR
SGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSGS